; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22174 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22174
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr08:2171780..2174192
RNA-Seq ExpressionCarg22174
SyntenyCarg22174
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025550.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-169100Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

XP_022960464.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita moschata]4.3e-16697.67Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQF+GKA+RMAVHSVVWKLGFGSELLVQNGLIQYYVE 
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFD+MSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

XP_023004481.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita maxima]7.1e-16195.33Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKPLFSSVQN SRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHM CTGLMNQIFPASRVVAFCALSDAG
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALK CG F+GKAIRMAVHSVVWKLGFGS LLVQNGLIQ+YVET
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GCIGFARQVFDESSVKDVVTWTTMINGYTTNN LDEA+MLFD+M SSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

XP_023513845.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita pepo subsp. pepo]1.8e-16496.33Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKPLFSSVQNPSRFSIFP K TFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHLVFAQIENPNCFLWNTMIKGYCRA+CPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQF+GKA+RMAVHSV+WKLGFGSELLVQNGLIQYYVET
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFD+M SSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

XP_038898970.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Benincasa hispida]2.6e-13481Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKP F S+QNPS FSIFP  L FKILHSFR LSSS +AGKPKWNSL+NVFI+NPTLLILQSCSSM  LKQIQAHMT TGLMNQIFPASR++AFCALSD+G
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHL+FAQIE+PNCF WNTMIKGYCRA  PSMGF FFRQMIRNRV+LDCGSFV ALK C QF+GK +  AVHSV+WKLGF SELLVQNGLIQ YVE 
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GC+GFARQVFDESSVKDVVTWTTMINGYT NN LDEAI LF+ M SS+VEPNEVTMIALLSA SQKGD VMGR LHE I+RK I+ SVNL+NTMLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

TrEMBL top hitse value%identityAlignment
A0A1S3BSJ4 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like8.9e-13378Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKP FSS+QNPS  SIFP  L  KILHSFRPLS+S++AGKPKWNSL+NVFI+NPTLLILQSCSSMF LKQIQAHMTCTGLM+QIFPASR++AFCALSD+G
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHL+F Q E+PNCF WNTMIKGYC+A  PS+GF FFRQMIRNR E DCGSFV ALK CGQF+ K + MAVHSV+WKLGF SELLV+NGLIQ YVET
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GC+GFARQVFDESS+KDVVTWTTMINGY  +N LDEAI LF+ M SS+VEPNEVTMIALLSACSQKGD VMG++LHE I+ K I+ SVNL+N MLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

A0A5A7USA2 Pentatricopeptide repeat-containing protein1.2e-13278Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKP FSS+QNPS  SIFP  L  KILHSFRPLS+S++AGKPKWNSL+NVFI+NPTLLILQSCSSMF LKQIQAHMTCTGLM+QIFPASR++AFCALSD+G
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHL+F Q E+PNCF WNTMIKGYC+A  PSMGF FFRQMIRNR E DCGSFV ALK CGQF+ K + MAVHSV+WKLGF SEL V+NGLIQ YVET
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GC+GFARQVFDESS+KDVVTWTTMINGY  +N LDEAI LF+ M SS+VEPNEVTMIALLSACSQKGD VMG++LHE I+ K I+ SVNL+N MLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

A0A6J1D7Q3 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like1.1e-13079.4Show/hide
Query:  MKPLF-SSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDA
        MKPLF SS+QNP++F IFP  L  +I H  R LSSS +AGKPKWNSL NVFI+NPTLLILQSCSSMF LKQI AHMTCTGLMNQIFPASRVVAFCALSD+
Subjt:  MKPLF-SSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDA

Query:  GDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVE
        GD+ YAH VFA+IE PNCFLWNTMIKGYC A   SMGF FFRQMIRNRVELDCGSFV ALK CGQF+G+   MAVH V+WKLGF SELLV+NGLIQYYVE
Subjt:  GDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVE

Query:  TGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISS
        TG + FARQVFDESSVKDVVTWTTMINGYTT+NCLDEAI LFD M SS+VEPNEVTMI LLSACSQKGD +MGR+LHE I RKNI  SVNL+NTMLD+  
Subjt:  TGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISS

Query:  K
        K
Subjt:  K

A0A6J1HB35 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like2.1e-16697.67Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQF+GKA+RMAVHSVVWKLGFGSELLVQNGLIQYYVE 
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFD+MSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

A0A6J1KS94 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like3.5e-16195.33Show/hide
Query:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG
        MKPLFSSVQN SRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHM CTGLMNQIFPASRVVAFCALSDAG
Subjt:  MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAG

Query:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET
        DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALK CG F+GKAIRMAVHSVVWKLGFGS LLVQNGLIQ+YVET
Subjt:  DIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVET

Query:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        GCIGFARQVFDESSVKDVVTWTTMINGYTTNN LDEA+MLFD+M SSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD+  K
Subjt:  GCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

SwissProt top hitse value%identityAlignment
O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic1.6e-3332.38Show/hide
Query:  ILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMI-RNRVELDCGSFV
        +++ C S+  LKQ   HM  TG  +  + AS++ A  ALS    + YA  VF +I  PN F WNT+I+ Y     P +    F  M+  ++   +  +F 
Subjt:  ILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMI-RNRVELDCGSFV

Query:  SALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTM
          +K   + S  ++  ++H +  K   GS++ V N LI  Y   G +  A +VF     KDVV+W +MING+      D+A+ LF  M S +V+ + VTM
Subjt:  SALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTM

Query:  IALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        + +LSAC++  +   GR +   I+   ++ ++ L N MLD+ +K
Subjt:  IALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

Q9FG16 Pentatricopeptide repeat-containing protein At5g065407.7e-3329.17Show/hide
Query:  LTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-----IHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFF
        L  +   +P L +LQSCSS   LK I   +  T L++ +F ASR++A C      +     + YA+ +F+QI+NPN F++N +I+ +     PS  F F+
Subjt:  LTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-----IHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFF

Query:  RQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCI----------GF---------------------ARQV
         QM+++R+  D  +F   +K   +     +    HS + + GF +++ V+N L+  Y   G I          GF                     AR++
Subjt:  RQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCI----------GF---------------------ARQV

Query:  FDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDI
        FDE   +++ TW+ MINGY  NNC ++AI LF+ M    V  NE  M++++S+C+  G    G   +E + + +++ ++ L   ++D+
Subjt:  FDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDI

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.7e-3230.46Show/hide
Query:  PLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-IHYAHLVFAQIENPNCFLWNTMIKGYCR
        P     ++  P ++S+ N    +P+L +L +C ++  L+ I A M   GL N  +  S+++ FC LS   + + YA  VF  I+ PN  +WNTM +G+  
Subjt:  PLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-IHYAHLVFAQIENPNCFLWNTMIKGYCR

Query:  AKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDES----------------
        +  P      +  MI   +  +  +F   LK C +         +H  V KLG   +L V   LI  YV+ G +  A +VFD+S                
Subjt:  AKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDES----------------

Query:  ---------------SVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDIS
                        VKDVV+W  MI+GY       EA+ LF  M  +NV P+E TM+ ++SAC+Q G   +GR +H  I      S++ +VN ++D+ 
Subjt:  ---------------SVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDIS

Query:  SK
        SK
Subjt:  SK

Q9LUJ2 Pentatricopeptide repeat-containing protein At3g226905.0e-3229.39Show/hide
Query:  ILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVA-FCALSDAGDIHYAHLVFAQIEN-PNCFLWNT
        +LH    + ++    KP  + L     T  T   L++C ++  LK     +T  GL N +   +++VA  C L     + +A  VF   E+   CF++N+
Subjt:  ILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVA-FCALSDAGDIHYAHLVFAQIEN-PNCFLWNT

Query:  MIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWT
        +I+GY  +   +   L F +M+ + +  D  +F   L  C +   K   + +H ++ K+G+  +L VQN L+ +Y E G +  AR+VFDE S ++VV+WT
Subjt:  MIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWT

Query:  TMINGYTTNNCLDEAI-MLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        +MI GY   +   +A+ + F M+    V PN VTM+ ++SAC++  D   G  ++  I+   I  +  +V+ ++D+  K
Subjt:  TMINGYTTNNCLDEAI-MLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

Q9SJZ3 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial9.7e-4436.4Show/hide
Query:  WNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQ
        WNS  +  + NP L +L+ C  + HLKQIQA M   GL+   F +SR++AFCALS++  + Y+  +   IENPN F WN  I+G+  ++ P   FL ++Q
Subjt:  WNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQ

Query:  MIRN---RVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIM
        M+R+       D  ++    KVC      ++   +   V KL       V N  I  +   G +  AR+VFDES V+D+V+W  +INGY      ++AI 
Subjt:  MIRN---RVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIM

Query:  LFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        ++ +M S  V+P++VTMI L+S+CS  GD   G+  +E +K   +  ++ LVN ++D+ SK
Subjt:  LFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-3330.46Show/hide
Query:  PLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-IHYAHLVFAQIENPNCFLWNTMIKGYCR
        P     ++  P ++S+ N    +P+L +L +C ++  L+ I A M   GL N  +  S+++ FC LS   + + YA  VF  I+ PN  +WNTM +G+  
Subjt:  PLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-IHYAHLVFAQIENPNCFLWNTMIKGYCR

Query:  AKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDES----------------
        +  P      +  MI   +  +  +F   LK C +         +H  V KLG   +L V   LI  YV+ G +  A +VFD+S                
Subjt:  AKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDES----------------

Query:  ---------------SVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDIS
                        VKDVV+W  MI+GY       EA+ LF  M  +NV P+E TM+ ++SAC+Q G   +GR +H  I      S++ +VN ++D+ 
Subjt:  ---------------SVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDIS

Query:  SK
        SK
Subjt:  SK

AT2G22410.1 SLOW GROWTH 16.9e-4536.4Show/hide
Query:  WNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQ
        WNS  +  + NP L +L+ C  + HLKQIQA M   GL+   F +SR++AFCALS++  + Y+  +   IENPN F WN  I+G+  ++ P   FL ++Q
Subjt:  WNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQ

Query:  MIRN---RVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIM
        M+R+       D  ++    KVC      ++   +   V KL       V N  I  +   G +  AR+VFDES V+D+V+W  +INGY      ++AI 
Subjt:  MIRN---RVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIM

Query:  LFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        ++ +M S  V+P++VTMI L+S+CS  GD   G+  +E +K   +  ++ LVN ++D+ SK
Subjt:  LFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-3432.38Show/hide
Query:  ILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMI-RNRVELDCGSFV
        +++ C S+  LKQ   HM  TG  +  + AS++ A  ALS    + YA  VF +I  PN F WNT+I+ Y     P +    F  M+  ++   +  +F 
Subjt:  ILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMI-RNRVELDCGSFV

Query:  SALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTM
          +K   + S  ++  ++H +  K   GS++ V N LI  Y   G +  A +VF     KDVV+W +MING+      D+A+ LF  M S +V+ + VTM
Subjt:  SALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTM

Query:  IALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        + +LSAC++  +   GR +   I+   ++ ++ L N MLD+ +K
Subjt:  IALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

AT3G22690.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885)3.5e-3329.39Show/hide
Query:  ILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVA-FCALSDAGDIHYAHLVFAQIEN-PNCFLWNT
        +LH    + ++    KP  + L     T  T   L++C ++  LK     +T  GL N +   +++VA  C L     + +A  VF   E+   CF++N+
Subjt:  ILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVA-FCALSDAGDIHYAHLVFAQIEN-PNCFLWNT

Query:  MIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWT
        +I+GY  +   +   L F +M+ + +  D  +F   L  C +   K   + +H ++ K+G+  +L VQN L+ +Y E G +  AR+VFDE S ++VV+WT
Subjt:  MIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWT

Query:  TMINGYTTNNCLDEAI-MLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK
        +MI GY   +   +A+ + F M+    V PN VTM+ ++SAC++  D   G  ++  I+   I  +  +V+ ++D+  K
Subjt:  TMINGYTTNNCLDEAI-MLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein5.5e-3429.17Show/hide
Query:  LTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-----IHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFF
        L  +   +P L +LQSCSS   LK I   +  T L++ +F ASR++A C      +     + YA+ +F+QI+NPN F++N +I+ +     PS  F F+
Subjt:  LTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGD-----IHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPSMGFLFF

Query:  RQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCI----------GF---------------------ARQV
         QM+++R+  D  +F   +K   +     +    HS + + GF +++ V+N L+  Y   G I          GF                     AR++
Subjt:  RQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCI----------GF---------------------ARQV

Query:  FDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDI
        FDE   +++ TW+ MINGY  NNC ++AI LF+ M    V  NE  M++++S+C+  G    G   +E + + +++ ++ L   ++D+
Subjt:  FDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCCCTCTTCTCTTCCGTTCAAAACCCATCTCGATTTTCAATCTTCCCGTTCAAACTCACCTTCAAAATCCTCCATTCTTTCCGACCACTCTCATCATCGGCAGC
CGCCGGAAAACCCAAATGGAATTCACTCACCAATGTCTTCATTACCAACCCAACTCTTCTGATCCTACAATCATGCTCTTCCATGTTTCATTTGAAGCAAATTCAAGCTC
ACATGACTTGCACTGGCCTCATGAACCAAATCTTCCCGGCCAGCCGCGTCGTAGCCTTTTGTGCTCTCTCCGATGCCGGTGACATTCATTATGCCCATCTCGTTTTCGCT
CAAATTGAAAACCCTAATTGCTTTTTGTGGAATACGATGATTAAGGGTTATTGCAGAGCTAAATGCCCTTCAATGGGGTTCTTGTTTTTCCGGCAAATGATTCGGAATCG
AGTTGAATTGGACTGTGGGAGCTTTGTTTCTGCGCTCAAGGTGTGCGGCCAATTTTCCGGGAAAGCAATAAGAATGGCGGTGCATTCTGTGGTTTGGAAGTTGGGGTTTG
GTTCTGAATTGCTGGTTCAAAATGGATTGATTCAGTACTATGTTGAAACTGGGTGTATTGGTTTTGCACGCCAAGTGTTTGATGAAAGTTCTGTGAAGGATGTTGTTACT
TGGACGACGATGATCAATGGATACACAACGAACAATTGTTTGGATGAGGCTATAATGTTGTTCGATATGATGTCGTCGAGTAACGTTGAGCCGAATGAGGTCACTATGAT
TGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTATGTAATGGGGAGGTCACTTCATGAACTCATAAAAAGGAAGAACATAAGCTCCAGTGTTAATTTGGTCAATACCA
TGTTGGATATTAGTTCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACCCCTCTTCTCTTCCGTTCAAAACCCATCTCGATTTTCAATCTTCCCGTTCAAACTCACCTTCAAAATCCTCCATTCTTTCCGACCACTCTCATCATCGGCAGC
CGCCGGAAAACCCAAATGGAATTCACTCACCAATGTCTTCATTACCAACCCAACTCTTCTGATCCTACAATCATGCTCTTCCATGTTTCATTTGAAGCAAATTCAAGCTC
ACATGACTTGCACTGGCCTCATGAACCAAATCTTCCCGGCCAGCCGCGTCGTAGCCTTTTGTGCTCTCTCCGATGCCGGTGACATTCATTATGCCCATCTCGTTTTCGCT
CAAATTGAAAACCCTAATTGCTTTTTGTGGAATACGATGATTAAGGGTTATTGCAGAGCTAAATGCCCTTCAATGGGGTTCTTGTTTTTCCGGCAAATGATTCGGAATCG
AGTTGAATTGGACTGTGGGAGCTTTGTTTCTGCGCTCAAGGTGTGCGGCCAATTTTCCGGGAAAGCAATAAGAATGGCGGTGCATTCTGTGGTTTGGAAGTTGGGGTTTG
GTTCTGAATTGCTGGTTCAAAATGGATTGATTCAGTACTATGTTGAAACTGGGTGTATTGGTTTTGCACGCCAAGTGTTTGATGAAAGTTCTGTGAAGGATGTTGTTACT
TGGACGACGATGATCAATGGATACACAACGAACAATTGTTTGGATGAGGCTATAATGTTGTTCGATATGATGTCGTCGAGTAACGTTGAGCCGAATGAGGTCACTATGAT
TGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTATGTAATGGGGAGGTCACTTCATGAACTCATAAAAAGGAAGAACATAAGCTCCAGTGTTAATTTGGTCAATACCA
TGTTGGATATTAGTTCAAAGTGA
Protein sequenceShow/hide protein sequence
MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQSCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFA
QIENPNCFLWNTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVT
WTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDISSK