CuGenDBv2

Gene ID	Carg22211
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription initiation factor IIE subunit beta
Genome location	Carg_Chr16:3338063..3343375
RNA-Seq Expression	Carg22211
Synteny	Carg22211
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0005673 - transcription factor TFIIE complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	IPR003166 - Transcription factor TFIIE beta subunit, DNA-binding domain IPR016656 - Transcription initiation factor TFIIE, beta subunit IPR040501 - TFA2, Winged helix domain 2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008452012.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo]

3.9e-137

93.86

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC
        MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RP APA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+C
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_011653191.1 general transcription factor IIE subunit 2 [Cucumis sativus]

3.5e-138

93.86

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC
        MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RPPAPA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+C
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_022931511.1 general transcription factor IIE subunit 2-like [Cucurbita moschata]

1.6e-146

100

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD
        MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD

Query:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
        INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
Subjt:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD

Query:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_022984812.1 general transcription factor IIE subunit 2-like [Cucurbita maxima]

3.5e-146

99.64

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD
        MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+CYVD
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD

Query:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
        INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
Subjt:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD

Query:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

XP_038906431.1 general transcription factor IIE subunit 2-like [Benincasa hispida]

4.1e-139

94.91

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYV
        MALQE+LDRFK+QQERCQTTLSGIAA+K+ + +TP+FTPAPAASRPPAPA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+CYV
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYV

Query:  DINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD
        DINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD
Subjt:  DINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPK KKKKQEISKRTKLTNAHLPELFKN
Subjt:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWU5 Transcription initiation factor IIE subunit beta

1.7e-138

93.86

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC
        MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RPPAPA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+C
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A1S3BS95 Transcription initiation factor IIE subunit beta

1.9e-137

93.86

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC
        MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RP APA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+C
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A5A7TNR4 Transcription initiation factor IIE subunit beta

1.9e-137

93.86

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC
        MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RP APA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+C
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESC

Query:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
        YVDINSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A6J1ETU7 Transcription initiation factor IIE subunit beta

7.6e-147

100

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD
        MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD

Query:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
        INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
Subjt:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD

Query:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

A0A6J1J372 Transcription initiation factor IIE subunit beta

1.7e-146

99.64

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD
        MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+CYVD
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD

Query:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
        INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD
Subjt:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDD

Query:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Subjt:  DLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

SwissProt top hits

e value

%identity

Alignment

P79011 Transcription initiation factor IIE subunit beta

3.1e-12

28.75

Show/hide

Query:  AASRPPAPAIKFSNDTERLQHINSIRKSPVG----AQIKRVIDLLLETRQAFTPEQINESCYVDINSNKAVFDSLRNNPKVHYDGRR--FSYKSKHDLKD
        AAS P + ++K       L + +    S VG    +Q+   ++ L E  +  T E+I  + Y+       + + L+ N +++YD R   F++K  H+++ 
Subjt:  AASRPPAPAIKFSNDTERLQHINSIRKSPVG----AQIKRVIDLLLETRQAFTPEQINESCYVDINSNKAVFDSLRNNPKVHYDGRR--FSYKSKHDLKD

Query:  KNQLLYLI--RKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPAT
           LL  +  +K   G+++ +L+D +P+V  +L+ L+  G+V LL +  D    + + ND      VD + +Q++ EI +P   LD+  +L K G+KP +
Subjt:  KNQLLYLI--RKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPAT

Query:  ---NTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHL
           +T KR  + Q      PK KK K   ++R K+TN HL
Subjt:  ---NTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHL

Q54KJ8 General transcription factor IIE subunit 2

2.5e-14

26.3

Show/hide

Query:  FKRQQERCQTTLSGI-AASKTTTTTPRFTPAPAASRPPAPAIKFSN-DTERLQHINSIRKSPVGAQIKRVIDLL--LETRQAFTPEQINESCYVDINSNK
        FK  Q +   TL+ I   S +T +  ++ P  +     + A + S+  T        +++ P    +  +++ L  LE   A T E ++ + ++ I+   
Subjt:  FKRQQERCQTTLSGI-AASKTTTTTPRFTPAPAASRPPAPAIKFSN-DTERLQHINSIRKSPVGAQIKRVIDLL--LETRQAFTPEQINESCYVDINSNK

Query:  AVFDSLRNNPKVHYDGR-RFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQ
         + + LRNN K+   G  RFS+K K +++ +  +L L+  +P GI V +L +SY +   D++ LK + Q++ +   +S  DI +PND R+++ +  +L  
Subjt:  AVFDSLRNNPKVHYDGR-RFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQ

Query:  LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
        +++ I+LP +  D+EK+++  G+    +  +   +A+   S+K K ++KK    + TK+TN H+     N
Subjt:  LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

Arabidopsis top hits

e value

%identity

Alignment

AT4G20330.1 Transcription initiation factor TFIIE, beta subunit

7.1e-97

68.57

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPR-FTPAPAA---SRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINES
        MAL+E+LD+F +QQ +CQ+TLS IA+S+  T++ R   P PAA    +P A  +KFS+DTERLQ+IN+IRK+PVGAQIKRVIDLL E R A TPEQINE 
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPR-FTPAPAA---SRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINES

Query:  CYVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQI
        C+VD+++NKAVFDSLR NPK HYDGRRFSYK+ HD+ DKNQLL L+RK+ +GIAV+DLKD+YP+VMEDL+AL ASG ++LLSN  SQEDIAYPND + +I
Subjt:  CYVDINSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQI

Query:  KVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-NVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN
        KVDD+ K LFR+I +P DMLDVEK+L K G+KPATNTA+RRA AQ +  S+KPK  KKKKQEISKRTKLTNAHLPELF+N
Subjt:  KVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-NVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN

AT4G21010.1 Transcription initiation factor TFIIE, beta subunit

7.4e-78

58.12

Show/hide

Query:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD
        MAL+E+LD+F +QQE+CQ+TLS I++S+T  +      A  + +P     KFS +T++LQHI +IR S VGAQ+K VIDLL +TR A+T EQINE+CYVD
Subjt:  MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVD

Query:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQV-WLLSNFDSQEDIAYPNDPRIQIKVD
        +++NKAVFDSLR NPKVHYDGRRFSYK+ H++KDK QLL  + K  + I V DLKD+YP+VMEDL++LK+SG++ WLLSN DS+E   Y N+     K+D
Subjt:  INSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQV-WLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-NVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN
        D+LK LFR+I +P DML+VEK+L K G+KPATN A+RRA  Q +  S+KPK  KKKK+EI+ RTKLTN+H+ ELF++
Subjt:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-NVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTGCAAGAAAAACTAGATAGGTTTAAGAGACAACAAGAAAGATGCCAGACTACCTTGTCTGGCATTGCTGCATCCAAGACTACTACTACTACACCCAGGTTTAC
GCCTGCTCCAGCCGCTTCAAGACCTCCGGCTCCTGCTATAAAATTTTCAAATGACACTGAGAGACTTCAACACATTAACAGCATAAGGAAATCCCCAGTCGGGGCTCAGA
TCAAGAGGGTTATTGACCTGCTTCTGGAGACAAGACAAGCCTTTACACCTGAGCAAATCAATGAATCATGTTATGTTGATATAAATTCCAACAAAGCTGTCTTTGATAGT
TTGCGGAATAACCCAAAGGTGCACTATGATGGGAGGCGTTTCTCATACAAGTCCAAGCATGATCTGAAGGATAAGAATCAACTTCTTTACTTGATTCGGAAATTTCCAGA
AGGCATTGCTGTCATTGATCTCAAGGATTCTTATCCAAGCGTTATGGAAGATTTGCAAGCCCTAAAAGCCTCAGGCCAGGTTTGGCTTCTCTCAAACTTTGATTCACAAG
AAGATATTGCATACCCAAATGACCCTCGAATTCAAATCAAAGTAGACGATGATCTGAAGCAACTGTTTCGGGAAATTGAATTACCTCGTGATATGCTCGATGTCGAAAAG
GATCTGCAGAAGAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGCGAGCCAATGCACAAAATGTGGCGTCCTCGAAACCAAAGCCGAAGAAAAAGAAGCAAGAGAT
CAGCAAGAGGACCAAGCTCACCAATGCACATCTTCCGGAGCTCTTCAAGAATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MALQEKLDRFKRQQERCQTTLSGIAASKTTTTTPRFTPAPAASRPPAPAIKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVDINSNKAVFDS
LRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEK
DLQKNGMKPATNTAKRRANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

Carg22211 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome