; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22213 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22213
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description40S ribosomal protein S10-1-like
Genome locationCarg_Chr16:3334392..3336649
RNA-Seq ExpressionCarg22213
SyntenyCarg22213
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146529.1 40S ribosomal protein S10-1 [Cucumis sativus]1.1e-9598.35Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

XP_022931372.1 40S ribosomal protein S10-1-like [Cucurbita moschata]1.3e-9699.45Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG AASSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

XP_022982956.1 40S ribosomal protein S10-1-like [Cucurbita maxima]2.9e-9698.9Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA ASSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

XP_022985005.1 40S ribosomal protein S10-1-like [Cucurbita maxima]9.8e-9799.45Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

XP_023553253.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo]4.4e-97100Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

TrEMBL top hitse value%identityAlignment
A0A0A0KUQ3 S10_plectin domain-containing protein5.3e-9698.35Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A1S3BST3 40S ribosomal protein S10-1-like1.5e-9597.8Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A6J1EYG0 40S ribosomal protein S10-1-like6.2e-9799.45Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG AASSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A6J1J0T0 40S ribosomal protein S10-1-like1.4e-9698.9Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA ASSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A6J1JA51 40S ribosomal protein S10-1-like4.8e-9799.45Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-11.4e-7479.56Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV +AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS
        PFG GPPGDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +SS
Subjt:  PFG-GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS

P0DKK9 40S ribosomal protein S10-21.4e-7479.56Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV +AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS
        PFG GPPGDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +SS
Subjt:  PFG-GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS

Q9FFS8 40S ribosomal protein S10-21.5e-6880.66Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV FAKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS
        RPFGG  GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA S
Subjt:  RPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS

Q9LTF2 40S ribosomal protein S10-31.6e-7380.33Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVCFAKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDR RG PR EGG+R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S LP
Subjt:  PFGGPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

Q9SW09 40S ribosomal protein S10-12.9e-7579.12Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein2.1e-7679.12Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein6.0e-6066.48Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGP G                                 G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Subjt:  PFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein1.1e-6980.66Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV FAKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS
        RPFGG  GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA S
Subjt:  RPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein3.7e-4980.74Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKG
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK 
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKG

Query:  GAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS
        GAPADY+P F GG GG R GFGRGAG +GGGAA S
Subjt:  GAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein1.1e-7480.33Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVCFAKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        PFGGPPGDR RG PR EGG+R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S LP
Subjt:  PFGGPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATTTCAGAGAAGAACCGCAGGGAGATCTCCAAGTATCTCTTTCAAGAGGGGGTTTGTTTTGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGT
GCCTAATTTGCAGGTTATTAAGCTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCATGGATGCATTACTACTGGTACCTCACCAACGATGGCATTG
AGTTCCTCAGAACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGTGGACCACCTGGTGATCGCCCA
CGGGGTCCGCCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGCGATGGTTACCGTGGTGGTCCTCGTGGACCTGCTGGCGAGTTTGGGGGTGACAAGGGAGGAGC
TCCTGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTAGTTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCATGA
mRNA sequenceShow/hide mRNA sequence
TCCTCATTCTTCTCGCCTCTTGCCTCGGCTGCTGCTGTCTTCAGTTCTTGCTGAATTTCAAACATGATTATTTCAGAGAAGAACCGCAGGGAGATCTCCAAGTATCTCTT
TCAAGAGGGGGTTTGTTTTGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAGGTTATTAAGCTGATGCAGAGCTTCAAGTCCAAGG
AATATGTGCGCGAGACATTTGCATGGATGCATTACTACTGGTACCTCACCAACGATGGCATTGAGTTCCTCAGAACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCT
ACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGTGGACCACCTGGTGATCGCCCACGGGGTCCGCCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCG
CGATGGTTACCGTGGTGGTCCTCGTGGACCTGCTGGCGAGTTTGGGGGTGACAAGGGAGGAGCTCCTGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCAG
GTTTTGGCCGTGGAGCTGGTAGTTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCATGAAAAGCATGATCTTAGAAGCAGTTTAATGAATTTTCAGTGGAAAGAGTT
ATAGCAGCAGCTTGACTGAAGAGTTCATTAGCATTTTTTCCCCCTTTCATTTAGCTTTGGGAATCTTATT
Protein sequenceShow/hide protein sequence
MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRP
RGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP