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Carg22236 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22236
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionarabinogalactan peptide 22-like
Genome locationCarg_Chr16:3186752..3187694
RNA-Seq ExpressionCarg22236
SyntenyCarg22236
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577157.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]1.9e-27100Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_022136454.1 arabinogalactan peptide 22-like [Momordica charantia]1.5e-2492.96Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAALIFAIFLPVA P SL PAPAP+SDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]9.3e-2798.59Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_022985432.1 arabinogalactan peptide 20 [Cucurbita maxima]3.5e-2697.18Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLS+SF
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]1.5e-2491.55Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVS  SFGF+AAAALIFAIFLPVAQP SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSN+F
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

TrEMBL top hitse value%identityAlignment
A0A5D3CYF3 Arabinogalactan peptide 22-like4.4e-2287.14Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS
        MAVSR SF  +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSN+
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS

A0A6J1C4C2 arabinogalactan peptide 22-like7.2e-2592.96Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAALIFAIFLPVA P SL PAPAP+SDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

A0A6J1ETC6 arabinogalactan peptide 22-like4.5e-2798.59Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

A0A6J1FMT5 arabinogalactan peptide 22-like5.2e-2388.57Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS
        MAVSR SFGFVAAAAL+F IFLPVAQPQSLAPAPAPTSDGTSIDQGIAY+LM VALALTYLIH+ADL +S
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS

A0A6J1J4V7 arabinogalactan peptide 201.7e-2697.18Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLS+SF
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 161.1e-1464.71Show/hide
Query:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        SR S    A  + +FA+ L +A  QSLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S+
Subjt:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

Q8L9T8 Arabinogalactan protein 417.7e-1671.43Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH
        M+ SR+ FG     ++IFAI LP+A  QS APAPAPTSDGT+IDQGIAYVLMLVAL LTYLIH
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH

Q9FK16 Arabinogalactan protein 221.0e-1263.49Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH
        MA  +     +A   +I  I LP+AQ  S +PAPAPTSDGTSIDQGIAYVLM+VALALTY IH
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH

Q9M373 Arabinogalactan protein 202.2e-1565.67Show/hide
Query:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS
        SR S   +A  A +FA+  P A  QSLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S
Subjt:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 167.9e-1664.71Show/hide
Query:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
        SR S    A  + +FA+ L +A  QSLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S+
Subjt:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF

AT3G61640.1 arabinogalactan protein 201.6e-1665.67Show/hide
Query:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS
        SR S   +A  A +FA+  P A  QSLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+S
Subjt:  SRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNS

AT5G24105.1 arabinogalactan protein 415.5e-1771.43Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH
        M+ SR+ FG     ++IFAI LP+A  QS APAPAPTSDGT+IDQGIAYVLMLVAL LTYLIH
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH

AT5G53250.1 arabinogalactan protein 227.4e-1463.49Show/hide
Query:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH
        MA  +     +A   +I  I LP+AQ  S +PAPAPTSDGTSIDQGIAYVLM+VALALTY IH
Subjt:  MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCCAGGATGTCTTTTGGATTTGTGGCTGCCGCTGCGCTCATCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCAC
CAGCGACGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAACAGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTTCCAGGATGTCTTTTGGATTTGTGGCTGCCGCTGCGCTCATCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCAC
CAGCGACGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAACAGCTTCTAA
Protein sequenceShow/hide protein sequence
MAVSRMSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF