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Carg22251 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22251
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:3106266..3106673
RNA-Seq ExpressionCarg22251
SyntenyCarg22251
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577140.1 hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sororia]5.8e-6299.26Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLP QGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN
        MLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN
Subjt:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN

KAG7015140.1 hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-62100Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN
        MLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN
Subjt:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN

XP_022931429.1 uncharacterized protein LOC111437608 [Cucurbita moschata]3.2e-6099.24Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM
        MLSRCSDGGVLEF DVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM

XP_023522331.1 uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo]1.2e-5998.48Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM
        MLSRCS+GGVLEF DVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM

XP_023552096.1 uncharacterized protein LOC111809864 [Cucurbita pepo subsp. pepo]2.7e-5997.73Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM
        MLSRCS+GGVLEF DVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein4.7e-4173.94Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAI--DREERSTEEETEKKVVRITVKL
        MI NLISSLNKKLQAVEIS+RC+RTKKT  VYR +++KK      S   P     EI+KVKKRVRFADTEPVIIAI  DREE   E ETEKKVVRITVKL
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAI--DREERSTEEETEKKVVRITVKL

Query:  TKQEANRMLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN
        TKQEANRMLSRCS+GGVLEF DVASELMRIP  RV SS+V N
Subjt:  TKQEANRMLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN

A0A1S3BS40 uncharacterized protein LOC1034930981.5e-4275Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK
        MI NLISSLNKKLQAVEISNRC+RTKKTT VYR D++KKK     S   P     EI+KVKKRVRFADTEPVIIAI  +    EEETEKKVVRITVKLTK
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN
        QEANRMLSRCS+ GVLEF DVASEL+RIP  RVSSS+V N
Subjt:  QEANRMLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN

A0A5D3D246 Uncharacterized protein1.5e-4275Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK
        MI NLISSLNKKLQAVEISNRC+RTKKTT VYR D++KKK     S   P     EI+KVKKRVRFADTEPVIIAI  +    EEETEKKVVRITVKLTK
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN
        QEANRMLSRCS+ GVLEF DVASEL+RIP  RVSSS+V N
Subjt:  QEANRMLSRCSDGGVLEFRDVASELMRIPAARVSSSMVVN

A0A6J1EU86 uncharacterized protein LOC1114376081.6e-6099.24Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM
        MLSRCSDGGVLEF DVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFRDVASELMRIPAARVSSSM

A0A6J1JBA8 uncharacterized protein LOC1114834362.1e-5796.27Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQ--LPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEA
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYR DMSKKKQPQ   PSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEA
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQ--LPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEA

Query:  NRMLSRCSDGGVLEFRDVASELMRIPAARVSSSM
        NRMLSRCSDGGVLEF DVASELMRIPAARVSSSM
Subjt:  NRMLSRCSDGGVLEFRDVASELMRIPAARVSSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGAGATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGAGGCGATATGAG
CAAGAAGAAGCAGCCGCAGTTGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAG
AGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTCGTTAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGCGGCGTT
CTAGAATTCAGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCCCGCGTTAGCTCTTCTATGGTAGTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGAGATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGAGGCGATATGAG
CAAGAAGAAGCAGCCGCAGTTGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAG
AGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTCGTTAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGCGGCGTT
CTAGAATTCAGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCCCGCGTTAGCTCTTCTATGGTAGTCAATTGA
Protein sequenceShow/hide protein sequence
MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGV
LEFRDVASELMRIPAARVSSSMVVN