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Carg22269 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22269
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:4175722..4176475
RNA-Seq ExpressionCarg22269
SyntenyCarg22269
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063383.1 uncharacterized protein E6C27_scaffold508G00110 [Cucumis melo var. makuwa]9.0e-3891.86Show/hide
Query:  RRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        RRSSVDLPVSKMNH+IV+QNTFIS EET+GFASISDLKDP+VCPKPRRLAILANNHIKQPLRWHQTE CDSKAGADLLDIILKK S
Subjt:  RRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

KAG6581179.1 hypothetical protein SDJN03_21181, partial [Cucurbita argyrosperma subsp. sororia]6.6e-4198.84Show/hide
Query:  RRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        RRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKK S
Subjt:  RRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

KAG7017917.1 hypothetical protein SDJN02_19783, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-63100Show/hide
Query:  MLWSRVGSDCVRVAVYPLSQRRLNRDICRRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSK
        MLWSRVGSDCVRVAVYPLSQRRLNRDICRRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSK
Subjt:  MLWSRVGSDCVRVAVYPLSQRRLNRDICRRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSK

Query:  AGADLLDIILKKASSNYKFNI
        AGADLLDIILKKASSNYKFNI
Subjt:  AGADLLDIILKKASSNYKFNI

XP_022935211.1 uncharacterized protein LOC111442160 [Cucurbita moschata]9.3e-3598.67Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKK S
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

XP_023528274.1 uncharacterized protein LOC111791243 [Cucurbita pepo subsp. pepo]9.3e-3598.67Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKK S
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

TrEMBL top hitse value%identityAlignment
A0A1S3CF27 uncharacterized protein LOC1035001586.1e-3290.67Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        MNH+IV+QNTFIS EET+GFASISDLKDP+VCPKPRRLAILANNHIKQPLRWHQTE CDSKAGADLLDIILKK S
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

A0A5A7V5L2 Uncharacterized protein4.4e-3891.86Show/hide
Query:  RRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        RRSSVDLPVSKMNH+IV+QNTFIS EET+GFASISDLKDP+VCPKPRRLAILANNHIKQPLRWHQTE CDSKAGADLLDIILKK S
Subjt:  RRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

A0A6J1D4M2 uncharacterized protein LOC1110169207.9e-3289.33Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        MNH+IV+QNTFIS EET+GFASISDLKDP+VCPKPRRLAILANNH+KQPLRWHQTE CDSKAGADLLDIILKK S
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

A0A6J1F3X6 uncharacterized protein LOC1114421604.5e-3598.67Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKK S
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

A0A6J1J8C6 uncharacterized protein LOC1114822091.3e-3497.33Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS
        MNHYIV+QNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKK S
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein3.1e-1244.74Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRW---HQTEFCDSKAGADLLDIILKK
        MN   ++QN F   EE +  A++SD +D ++CPKPRR+  L N+H  + LRW   HQ E C+S +G+++LD IL K
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRW---HQTEFCDSKAGADLLDIILKK

AT1G13390.2 unknown protein3.1e-1244.74Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRW---HQTEFCDSKAGADLLDIILKK
        MN   ++QN F   EE +  A++SD +D ++CPKPRR+  L N+H  + LRW   HQ E C+S +G+++LD IL K
Subjt:  MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRW---HQTEFCDSKAGADLLDIILKK

AT1G68490.1 unknown protein1.2e-0841.25Show/hide
Query:  MNHYIVKQNTFISREETKGFASISDL---KDPIVCPKPRRLAILAN-NHIKQPLRW---HQTEFCDSKAGADLLDIILKK
        MNH+ V+ N F +  + +  +S+S +   +  +VCPKPRR+ +  N +H  + LR    HQ E C+SKA  D+LDIIL K
Subjt:  MNHYIVKQNTFISREETKGFASISDL---KDPIVCPKPRRLAILAN-NHIKQPLRW---HQTEFCDSKAGADLLDIILKK

AT3G02555.1 unknown protein8.2e-1351.85Show/hide
Query:  MNHYIVKQNTFISREETKGFASI-SDLKDPIVCPKPRRLAILANNHIKQPLRWH-----QTEFCDSKAGADLLDIILKKAS
        MNH  ++QN F+SREE++GF  I S   D +VCPKPRR    ANN I+ P R H       + CDSKAG DLLDI  +K S
Subjt:  MNHYIVKQNTFISREETKGFASI-SDLKDPIVCPKPRRLAILANNHIKQPLRWH-----QTEFCDSKAGADLLDIILKKAS

AT5G16110.1 unknown protein9.3e-1756.25Show/hide
Query:  VSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQT----EFCDSKAGADLLDIILKK
        V KMNH  ++QN F+SREE  GF    D KD +VCPKPRR+ +LANN I+ PLR H +    + CDSKAGA+LL+II +K
Subjt:  VSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQT----EFCDSKAGADLLDIILKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTGGTCTCGCGTAGGATCTGACTGTGTTAGAGTTGCTGTGTATCCATTGTCTCAACGCCGTTTGAATCGGGATATTTGCAGGCGTTCTTCTGTGGATCTGCCAGT
TTCAAAGATGAATCATTATATTGTTAAGCAGAATACGTTTATTTCACGTGAGGAGACTAAGGGCTTTGCCTCAATCTCTGATCTGAAGGACCCAATTGTCTGCCCAAAGC
CCAGGCGACTCGCAATTCTTGCTAACAATCACATTAAACAGCCCTTAAGATGGCACCAAACTGAGTTTTGTGATTCAAAAGCTGGGGCAGATCTCCTAGATATCATCTTA
AAGAAGGCAAGTTCTAATTATAAGTTCAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTGGTCTCGCGTAGGATCTGACTGTGTTAGAGTTGCTGTGTATCCATTGTCTCAACGCCGTTTGAATCGGGATATTTGCAGGCGTTCTTCTGTGGATCTGCCAGT
TTCAAAGATGAATCATTATATTGTTAAGCAGAATACGTTTATTTCACGTGAGGAGACTAAGGGCTTTGCCTCAATCTCTGATCTGAAGGACCCAATTGTCTGCCCAAAGC
CCAGGCGACTCGCAATTCTTGCTAACAATCACATTAAACAGCCCTTAAGATGGCACCAAACTGAGTTTTGTGATTCAAAAGCTGGGGCAGATCTCCTAGATATCATCTTA
AAGAAGGCAAGTTCTAATTATAAGTTCAATATTTGA
Protein sequenceShow/hide protein sequence
MLWSRVGSDCVRVAVYPLSQRRLNRDICRRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIIL
KKASSNYKFNI