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Carg22270 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22270
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:4175305..4175613
RNA-Seq ExpressionCarg22270
SyntenyCarg22270
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581179.1 hypothetical protein SDJN03_21181, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4597.06Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
        + +GSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA

Query:  VA
        VA
Subjt:  VA

KAG7017916.1 hypothetical protein SDJN02_19782, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-46100Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
        MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA

Query:  VA
        VA
Subjt:  VA

XP_022935211.1 uncharacterized protein LOC111442160 [Cucurbita moschata]8.4e-4596.08Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
        + +GSEQSSSHVASSPPYFSGSPPSRASNPLIQD RFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA

Query:  VA
        VA
Subjt:  VA

XP_022983663.1 uncharacterized protein LOC111482209 [Cucurbita maxima]1.3e-4295.1Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
        + +GSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSAS K GGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA

Query:  VA
        VA
Subjt:  VA

XP_023528274.1 uncharacterized protein LOC111791243 [Cucurbita pepo subsp. pepo]6.4e-4596.08Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
        + +GSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDE+VSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA

Query:  VA
        VA
Subjt:  VA

TrEMBL top hitse value%identityAlignment
A0A0A0L9U7 Uncharacterized protein5.5e-4290.38Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS--KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI
        + +GSEQSS+HVASSPP+FSGSPPSRASNPLIQDARFGDE++SPM ALPAYSPSGLSSPSSASS  KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS--KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI

Query:  PAVA
        PAVA
Subjt:  PAVA

A0A1S3CF27 uncharacterized protein LOC1035001581.6e-4189.42Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS--KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI
        + +GSEQSS+HVASSPP+FSGSPPSRASNPLIQDARFGDE++SPM  LPAYSPSGLSSPSSASS  KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS--KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI

Query:  PAVA
        PAVA
Subjt:  PAVA

A0A5A7V5L2 Uncharacterized protein5.5e-4290.38Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS--KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI
        + +GSEQSS+HVASSPP+FSGSPPSRASNPLIQDARFGDE++SPM ALPAYSPSGLSSPSSASS  KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS--KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRI

Query:  PAVA
        PAVA
Subjt:  PAVA

A0A6J1F3X6 uncharacterized protein LOC1114421604.0e-4596.08Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
        + +GSEQSSSHVASSPPYFSGSPPSRASNPLIQD RFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA

Query:  VA
        VA
Subjt:  VA

A0A6J1J8C6 uncharacterized protein LOC1114822096.5e-4395.1Show/hide
Query:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
        + +GSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSAS K GGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA
Subjt:  MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA

Query:  VA
        VA
Subjt:  VA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein6.7e-0843.3Show/hide
Query:  GSEQSSSHVASSPP-YFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS-KGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS
        G EQ  +    +PP +F+GSPPSR SNPL +D+ F +E +  M A P+ S    + P   SS + G C  A   FG  P  VRV GFDC   DR++S
Subjt:  GSEQSSSHVASSPP-YFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS-KGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS

AT1G13390.2 unknown protein6.7e-0843.3Show/hide
Query:  GSEQSSSHVASSPP-YFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS-KGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS
        G EQ  +    +PP +F+GSPPSR SNPL +D+ F +E +  M A P+ S    + P   SS + G C  A   FG  P  VRV GFDC   DR++S
Subjt:  GSEQSSSHVASSPP-YFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASS-KGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS

AT1G68490.1 unknown protein2.1e-1754.81Show/hide
Query:  GSEQSSSHVASSP-PYFSGSPPSRASNPLIQDARFGDERVSPMAALP---AYSPSGLSSPSSASSKGGGC-ARMKFGLKPAAVRVEGFDCLSRDRQNSRI
        G+EQ +  V  SP P+  GSPPSR +NPL QDARF DE VS  + +P      PS  SSPSS+S + GGC  R  FG  P  VRVEGFDCL RD +N  I
Subjt:  GSEQSSSHVASSP-PYFSGSPPSRASNPLIQDARFGDERVSPMAALP---AYSPSGLSSPSSASSKGGGC-ARMKFGLKPAAVRVEGFDCLSRDRQNSRI

Query:  PAVA
        PA+A
Subjt:  PAVA

AT3G02555.1 unknown protein9.6e-2363.64Show/hide
Query:  SPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        SPP+F GSPPSRA+NPL QDARFGDE+++ +      SPS      SAS    GC RMKFG+KPA VRVEGFDCL+RDR NS IPA+A
Subjt:  SPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

AT5G16110.1 unknown protein3.2e-2663.92Show/hide
Query:  VASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAA----LPAYSPSGLSSPSSASSKGG--GCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        ++SSPPYF GSPPSRA+NPL QDARF DE+++P++     L  YS +G  SPSS+SS     GC RMKFGL   AVRVEGFDCL+RDRQNS IPA+A
Subjt:  VASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAA----LPAYSPSGLSSPSSASSKGG--GCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAGGGGTCGGAACAATCGAGCAGCCACGTAGCTTCGTCGCCCCCATATTTTAGTGGGTCTCCGCCGAGCCGGGCTTCGAACCCATTAATCCAAGATGCACGGTT
TGGAGATGAGAGAGTGAGTCCTATGGCAGCATTGCCTGCATACTCCCCATCAGGTCTGTCATCTCCATCGTCGGCATCATCGAAAGGAGGAGGGTGTGCGAGGATGAAGT
TTGGTCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGTCTTAGTAGGGACCGACAGAATTCTAGGATCCCTGCAGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAGGGGTCGGAACAATCGAGCAGCCACGTAGCTTCGTCGCCCCCATATTTTAGTGGGTCTCCGCCGAGCCGGGCTTCGAACCCATTAATCCAAGATGCACGGTT
TGGAGATGAGAGAGTGAGTCCTATGGCAGCATTGCCTGCATACTCCCCATCAGGTCTGTCATCTCCATCGTCGGCATCATCGAAAGGAGGAGGGTGTGCGAGGATGAAGT
TTGGTCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGTCTTAGTAGGGACCGACAGAATTCTAGGATCCCTGCAGTTGCTTGA
Protein sequenceShow/hide protein sequence
MAQGSEQSSSHVASSPPYFSGSPPSRASNPLIQDARFGDERVSPMAALPAYSPSGLSSPSSASSKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA