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Carg22276 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22276
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionconserved peptide upstream open reading frame 9
Genome locationCarg_Chr14:4146604..4148126
RNA-Seq ExpressionCarg22276
SyntenyCarg22276
Gene Ontology termsNA
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650573.1 hypothetical protein Csa_010068 [Cucumis sativus]3.3e-2198.28Show/hide
Query:  ANDLMESKGGKKK-SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        ANDLMESKGGKKK SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  ANDLMESKGGKKK-SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

KAG6581173.1 hypothetical protein SDJN03_21175, partial [Cucurbita argyrosperma subsp. sororia]9.6e-4571.9Show/hide
Query:  MAARRGGRRLGITVIKSKSRGFSAKTFTKSQTIFCLLNSDQVFSLSNFVVLGLRFLAQGLGIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFIANDL
        MAARRGGRRLGITVIKSKSRGFSAK F                           F +  L I L+ F       RYEGKGFLGVKLFPDLLHFVFIANDL
Subjt:  MAARRGGRRLGITVIKSKSRGFSAKTFTKSQTIFCLLNSDQVFSLSNFVVLGLRFLAQGLGIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFIANDL

Query:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

KAG6607040.1 Uridine kinase-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2096.55Show/hide
Query:  NDLMESKGGKKK--SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        NDLMESKGGKKK  SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  NDLMESKGGKKK--SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

KAG7017910.1 hypothetical protein SDJN02_19776, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-77100Show/hide
Query:  MAARRGGRRLGITVIKSKSRGFSAKTFTKSQTIFCLLNSDQVFSLSNFVVLGLRFLAQGLGIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFIANDL
        MAARRGGRRLGITVIKSKSRGFSAKTFTKSQTIFCLLNSDQVFSLSNFVVLGLRFLAQGLGIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFIANDL
Subjt:  MAARRGGRRLGITVIKSKSRGFSAKTFTKSQTIFCLLNSDQVFSLSNFVVLGLRFLAQGLGIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFIANDL

Query:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

RZC28874.1 hypothetical protein D0Y65_000731 [Glycine soja]2.2e-2094.64Show/hide
Query:  NDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        N+LMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Subjt:  NDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

TrEMBL top hitse value%identityAlignment
A0A0A0LAP2 Uncharacterized protein1.7e-2695.59Show/hide
Query:  FPDLLHFVFIANDLMESKGGKKK-SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        F D LHFVFIANDLMESKGGKKK SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  FPDLLHFVFIANDLMESKGGKKK-SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

A0A1S4E3B1 uncharacterized protein LOC1079902741.8e-20100Show/hide
Query:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

A0A445LZX9 Uncharacterized protein1.0e-2094.64Show/hide
Query:  NDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        N+LMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Subjt:  NDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

A0A5B6VQX8 S-adenosylmethionine decarboxylase uORF4.0e-2091.07Show/hide
Query:  NDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        NDLME+KGGKK  S+SSSKS FYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  NDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

A0A5J5AL23 Uncharacterized protein3.0e-2065.31Show/hide
Query:  GIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFI-----ANDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        G FL  FFS      +  + F GV L       + I      NDLMESKGGKKK  SSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNC RKPS
Subjt:  GIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFI-----ANDLMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 91.3e-1881.48Show/hide
Query:  LMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        +MESKGGKKKSSSSS  SLFYEAPLGYSIEDVRP+GGIKKF+S+ YSNC ++PS
Subjt:  LMESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

AT3G25572.1 conserved peptide upstream open reading frame 114.0e-1781.48Show/hide
Query:  MESKGGKKKSSSSSSK-SLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        ME+KGGKKKSS+SSS+ SLF+EAPL YSIEDVRP+GGIKKFRSAAYSN   KPS
Subjt:  MESKGGKKKSSSSSSK-SLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

AT5G15948.1 conserved peptide upstream open reading frame 107.6e-1675.47Show/hide
Query:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESK G KKSSS+S  SL YEAPLGYSIEDVRP GGIKKF+S+ YSNC ++PS
Subjt:  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGAGAAGAGGAGGGAGACGGTTGGGTATAACCGTAATAAAATCGAAATCGCGTGGCTTTTCCGCTAAGACCTTCACAAAATCGCAAACGATCTTCTGCCTCTT
GAATTCTGATCAAGTTTTCTCTCTATCGAATTTTGTTGTCCTTGGCTTGCGGTTTCTTGCACAAGGTCTAGGGATTTTTCTGGTTTCGTTCTTCTCCGCTGATTCATTTA
ATCGGTACGAAGGAAAAGGATTTCTTGGTGTTAAACTGTTTCCCGATCTTTTACATTTCGTATTTATTGCGAATGATTTAATGGAGTCAAAAGGTGGGAAGAAGAAGTCT
AGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTTAGACCACACGGTGGAATCAAGAAATTCAGATCTGCTGCTTACTCCAA
CTGCGTTCGAAAGCCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGAGAAGAGGAGGGAGACGGTTGGGTATAACCGTAATAAAATCGAAATCGCGTGGCTTTTCCGCTAAGACCTTCACAAAATCGCAAACGATCTTCTGCCTCTT
GAATTCTGATCAAGTTTTCTCTCTATCGAATTTTGTTGTCCTTGGCTTGCGGTTTCTTGCACAAGGTCTAGGGATTTTTCTGGTTTCGTTCTTCTCCGCTGATTCATTTA
ATCGGTACGAAGGAAAAGGATTTCTTGGTGTTAAACTGTTTCCCGATCTTTTACATTTCGTATTTATTGCGAATGATTTAATGGAGTCAAAAGGTGGGAAGAAGAAGTCT
AGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTTAGACCACACGGTGGAATCAAGAAATTCAGATCTGCTGCTTACTCCAA
CTGCGTTCGAAAGCCATCCTGA
Protein sequenceShow/hide protein sequence
MAARRGGRRLGITVIKSKSRGFSAKTFTKSQTIFCLLNSDQVFSLSNFVVLGLRFLAQGLGIFLVSFFSADSFNRYEGKGFLGVKLFPDLLHFVFIANDLMESKGGKKKS
SSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS