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Carg22289 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22289
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHomeobox Hox-B3-like protein
Genome locationCarg_Chr14:4080215..4080775
RNA-Seq ExpressionCarg22289
SyntenyCarg22289
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581162.1 hypothetical protein SDJN03_21164, partial [Cucurbita argyrosperma subsp. sororia]2.3e-9398.39Show/hide
Query:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP
        MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRN+LYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFS VLRKENRKP
Subjt:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
         PGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI

KAG7017899.1 hypothetical protein SDJN02_19765, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-95100Show/hide
Query:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP
        MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP
Subjt:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
        PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI

XP_022934584.1 uncharacterized protein LOC111441720 [Cucurbita moschata]2.9e-8895.65Show/hide
Query:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRN+LY D+EQPEKPTPP KKQVKFMGLETVKKRSAAVAQSVPDFS VLRKENRKP
Subjt:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVK
        PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAG KRVGRLTDVRKSYAGFEEVK LTTAAANSINGENRGRRGKTVLGVK
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVK

XP_022983943.1 uncharacterized protein LOC111482410 [Cucurbita maxima]3.0e-8593.01Show/hide
Query:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRN+LY DDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFS VLRKENRKP
Subjt:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
        PPGLSPVMEMTPPGKT GKNIAGLSAN +G KSASAG KRVGRLTDVRKSYAGFEEVK LTTAAANSINGENR  RGKTVLGV QI
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI

XP_038903179.1 uncharacterized protein LOC120089840 [Benincasa hispida]5.6e-7181.08Show/hide
Query:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLS
        HQNS AD PISL LTAE FSMERGPRYRAYAELRESKLRLRN++Y D EQPEK TPPAKKQVKF+  ET++KRSAAVAQSVPDFS VLRKENRKPPPGLS
Subjt:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLS

Query:  PVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR----GRRGKTVLGVKQI
        PVMEMTPPGKT GK I GLS NS+GSKSASAG KR G LT VRKSYAGFEE+K  +TAAAN+INGENR    GRRGKTVLG++QI
Subjt:  PVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR----GRRGKTVLGVKQI

TrEMBL top hitse value%identityAlignment
A0A0A0L9P8 Uncharacterized protein1.9e-6980.98Show/hide
Query:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPG-L
        HQNS AD+PISL LT E FSMERGPRYRAYAELRESKLRLRN++Y  DE PEK TPP KKQVKF+G ETV+KRSA VAQSVPDFS VLRKENRKPPPG L
Subjt:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPG-L

Query:  SPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR--GRRGKTVLGVKQI
        SPVMEMTPPGKT GKNI GLS  S+GSKSASAG KR G LT VRKSYAGFEE+K  +TAAAN+INGENR  GRRGKTVLGV+QI
Subjt:  SPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR--GRRGKTVLGVKQI

A0A6J1F314 uncharacterized protein LOC1114417201.4e-8895.65Show/hide
Query:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRN+LY D+EQPEKPTPP KKQVKFMGLETVKKRSAAVAQSVPDFS VLRKENRKP
Subjt:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVK
        PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAG KRVGRLTDVRKSYAGFEEVK LTTAAANSINGENRGRRGKTVLGVK
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVK

A0A6J1GA97 uncharacterized protein LOC1114522041.5e-6676.88Show/hide
Query:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLS
        HQNS   +   L LTAE FSMERGPRYRAYAELRESKLRLRN++Y D EQPEK TPPAKKQV+F+G ETV+KRSA VAQSVPDFS VLRKENR+PPPGLS
Subjt:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLS

Query:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR----GRRGKTVLGVKQI
        PVMEMTPPGKT GK NI G+SANS+GSKSASAG KR G L   RKSYAGFEE+K  +TAAAN+INGEN+    GRRGKTVLGV+QI
Subjt:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR----GRRGKTVLGVKQI

A0A6J1J952 uncharacterized protein LOC1114824101.5e-8593.01Show/hide
Query:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRN+LY DDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFS VLRKENRKP
Subjt:  MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
        PPGLSPVMEMTPPGKT GKNIAGLSAN +G KSASAG KRVGRLTDVRKSYAGFEEVK LTTAAANSINGENR  RGKTVLGV QI
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI

A0A6J1KFU5 uncharacterized protein LOC1114928442.0e-6677.3Show/hide
Query:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLS
        HQNS   +   L LTAE FSMERGPRYRAYAELRESKLRLRNS+Y D EQPEK TPPAKKQV+F+G ETV+KRSA VAQSVPDFS VLRKEN++PPPGLS
Subjt:  HQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLS

Query:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR---GRRGKTVLGVKQI
        PVMEMTPPGKT GK NI G+SANS+GSKSASAG KR G L   RKSYAGFEE+K  +TAAAN+INGEN+   GRRGKTVLGV+QI
Subjt:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENR---GRRGKTVLGVKQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67035.1 unknown protein3.4e-1032.47Show/hide
Query:  STADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLY-----------CDDEQPEKPTPPAKKQVKF--MGLETVKKRSAAVAQSVPDFSVVLRK
        S     + LL+    +  ERG RY  YA LRESKLR++                  E+  +  P  K +  F     +T    S+++AQSVPDFS ++RK
Subjt:  STADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLY-----------CDDEQPEKPTPPAKKQVKF--MGLETVKKRSAAVAQSVPDFSVVLRK

Query:  ENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
        ENR+PP     L    E+TPP            +  +GS SASAG K+ G     RKS  G                    G  G+T+LG +QI
Subjt:  ENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI

AT1G67035.2 unknown protein4.2e-1634.12Show/hide
Query:  STADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLY-----------CDDEQPEKPTPPAKKQVKF--MGLETVKKRSAAVAQSVPDFSVVLRK
        S     + LL+    +  ERG RY  YA LRESKLR++                  E+  +  P  K +  F     +T    S+++AQSVPDFS ++RK
Subjt:  STADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLY-----------CDDEQPEKPTPPAKKQVKF--MGLETVKKRSAAVAQSVPDFSVVLRK

Query:  ENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKR-VGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRR---------------
        ENR+PP     L    E+TPP            +  +GS SASAG K+ +G +   RKSYA  +++K+++ AAA++ING    RR               
Subjt:  ENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKR-VGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRR---------------

Query:  -GKTVLGVKQI
         G+T+LG +QI
Subjt:  -GKTVLGVKQI

AT5G38300.1 unknown protein9.9e-1833.74Show/hide
Query:  QNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLY------------------------CDDEQPEKPTPPAKKQVKFMGL----------
        QNS   + + LLL       ERGPRY  Y+ LRESKLR++                             + ++ +K +P  KKQ +F G+          
Subjt:  QNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLY------------------------CDDEQPEKPTPPAKKQVKFMGL----------

Query:  -ETVKKRS------------AAVAQSVPDFSVVLRKENRKPPPGLSPVMEMTPPGKTPGKNIAGL--SANSKGSKSASAGGKR---VGRLTDVRKSYAGF
         E VKK+S            +++AQSVPDFS V+RKENR+P      +  +TPP  T      G+   + S+GSKSASAG K+   +  +   RKSYA  
Subjt:  -ETVKKRS------------AAVAQSVPDFSVVLRKENRKPPPGLSPVMEMTPPGKTPGKNIAGL--SANSKGSKSASAGGKR---VGRLTDVRKSYAGF

Query:  EEVKELTTAAANSINGENRGRRG-----------KTVLGVKQI
        E++K+++ AAA++ING   G  G           +T+LG +QI
Subjt:  EEVKELTTAAANSINGENRGRRG-----------KTVLGVKQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATAAATTCCACCAGAACTCCACCGCCGATTACCCAATTTCTCTCCTTCTCACGGCGGAGATTTTTTCCATGGAAAGAGGCCCGAGGTACAGAGCCTAC
GCAGAGCTCAGAGAATCCAAGCTCCGGCTGAGAAACTCACTGTACTGCGACGACGAACAGCCAGAAAAGCCTACGCCGCCGGCGAAGAAGCAAGTTAAATTTATG
GGTTTGGAGACCGTAAAGAAAAGGTCAGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCTGTAGTACTGAGGAAGGAGAACAGAAAGCCACCGCCGGGACTGTCG
CCGGTGATGGAGATGACACCACCAGGGAAGACGCCGGGGAAGAACATTGCCGGATTGTCGGCGAATTCGAAAGGGAGTAAGTCGGCGAGTGCAGGGGGAAAAAGG
GTCGGCAGATTGACCGACGTGAGGAAGAGCTACGCCGGATTTGAGGAGGTGAAGGAGCTTACAACGGCGGCGGCGAACTCCATTAATGGCGAAAACAGAGGAAGG
AGAGGGAAAACTGTATTGGGAGTTAAACAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATAAATTCCACCAGAACTCCACCGCCGATTACCCAATTTCTCTCCTTCTCACGGCGGAGATTTTTTCCATGGAAAGAGGCCCGAGGTACAGAGCCTAC
GCAGAGCTCAGAGAATCCAAGCTCCGGCTGAGAAACTCACTGTACTGCGACGACGAACAGCCAGAAAAGCCTACGCCGCCGGCGAAGAAGCAAGTTAAATTTATG
GGTTTGGAGACCGTAAAGAAAAGGTCAGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCTGTAGTACTGAGGAAGGAGAACAGAAAGCCACCGCCGGGACTGTCG
CCGGTGATGGAGATGACACCACCAGGGAAGACGCCGGGGAAGAACATTGCCGGATTGTCGGCGAATTCGAAAGGGAGTAAGTCGGCGAGTGCAGGGGGAAAAAGG
GTCGGCAGATTGACCGACGTGAGGAAGAGCTACGCCGGATTTGAGGAGGTGAAGGAGCTTACAACGGCGGCGGCGAACTCCATTAATGGCGAAAACAGAGGAAGG
AGAGGGAAAACTGTATTGGGAGTTAAACAGATTTGA
Protein sequenceShow/hide protein sequence
MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLS
PVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI