; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22323 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22323
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionrhomboid-like protein 20
Genome locationCarg_Chr16:7658876..7660127
RNA-Seq ExpressionCarg22323
SyntenyCarg22323
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596983.1 Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1586.79Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
KAG7015583.1 Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-28100Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDLETRNWRLYSELRRIGSSRIFKAD
        MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDLETRNWRLYSELRRIGSSRIFKAD
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDLETRNWRLYSELRRIGSSRIFKAD
XP_022154191.1 rhomboid-like protein 20 [Momordica charantia]1.3e-1483.02Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
XP_022936013.1 rhomboid-like protein 20 [Cucurbita moschata]3.5e-1586.79Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
XP_023539609.1 rhomboid-like protein 20 [Cucurbita pepo subsp. pepo]3.5e-1586.79Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
TrEMBL top hitse value%identityAlignment
A0A0A0LG81 UBA domain-containing protein6.4e-1583.02Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
A0A1S3CMQ9 rhomboid-like protein 206.4e-1583.02Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
A0A5D3D5B1 Rhomboid-like protein 206.4e-1583.02Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
A0A6J1DN01 rhomboid-like protein 206.4e-1583.02Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
A0A6J1FC34 rhomboid-like protein 201.7e-1586.79Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
        MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD  ++ R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQD--LETRNWRL
SwissProt top hitse value%identityAlignment
Q8RXQ2 Rhomboid-like protein 183.1e-1471.7Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL
        MNGGPSGFNNAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  + R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL
Q9LET3 Rhomboid-like protein 208.0e-1573.58Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL
        MNGGPSGF+NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  + R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL
Arabidopsis top hitse value%identityAlignment
AT2G41160.1 Ubiquitin-associated (UBA) protein2.2e-1571.7Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL
        MNGGPSGFNNAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  + R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL
AT3G56740.1 Ubiquitin-associated (UBA) protein5.7e-1673.58Show/hide
Query:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL
        MNGGPSGF+NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  + R W+L
Subjt:  MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDL--ETRNWRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGCGGCCCCTCTGGTTTCAACAATGCTCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCT
TGGCTTGTCCTATCAGGATTTGGAGACGAGAAACTGGAGATTGTACTCGGAGCTTAGAAGAATAGGAAGTAGCCGAATTTTCAAGGCTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGGCGGCCCCTCTGGTTTCAACAATGCTCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCT
TGGCTTGTCCTATCAGGATTTGGAGACGAGAAACTGGAGATTGTACTCGGAGCTTAGAAGAATAGGAAGTAGCCGAATTTTCAAGGCTGATTAG
Protein sequenceShow/hide protein sequence
MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDLETRNWRLYSELRRIGSSRIFKAD