CuGenDBv2

Gene ID	Carg22332
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RPM1-interacting protein 4-like isoform X2
Genome location	Carg_Chr16:7560260..7562325
RNA-Seq Expression	Carg22332
Synteny	Carg22332
Gene Ontology terms	GO:0005886 - plasma membrane (cellular component)
InterPro domains	IPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site IPR040387 - RPM1-interacting protein 4/NOI4

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577515.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-34

100

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Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES

XP_022932368.1 RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata]

3.7e-26

100

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA

XP_022932369.1 RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata]

1.1e-35

100

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES

XP_022965236.1 RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima]

3.1e-25

98.36

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQA
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA

XP_022965237.1 RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima]

9.7e-35

98.65

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQAKWFCCIQSPPTES
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7F7 AvrRpt-cleavage domain-containing protein

7.5e-25

81.58

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPA-AAGSGKPQA-KWFCCIQSPPTES
        M+EKGQPLPKFGEWDVNNPASAEGFTVIFNKAR EKK+GGQ  SPGKA R    A  GKPQA KWFCCIQSPPT+S
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPA-AAGSGKPQA-KWFCCIQSPPTES

A0A6J1EWT6 RPM1-interacting protein 4-like isoform X2

5.5e-36

100

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES

A0A6J1F1G4 RPM1-interacting protein 4-like isoform X1

1.8e-26

100

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA

A0A6J1HJT3 RPM1-interacting protein 4-like isoform X2

4.7e-35

98.65

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQAKWFCCIQSPPTES
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES

A0A6J1HL52 RPM1-interacting protein 4-like isoform X1

1.5e-25

98.36

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA
        MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQA
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA

SwissProt top hits

e value

%identity

Alignment

O22633 Protein NOI4

2.2e-21

62.03

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKA----LRPAAAGSGKPQ-AKWFCCIQSPPTES
        M++KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+    ++       KPQ  KW CC+Q+P  +S
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKA----LRPAAAGSGKPQ-AKWFCCIQSPPTES

Q8GYN5 RPM1-interacting protein 4

4.7e-08

45.31

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Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCC
        EK   +PKFG+WD NNP+SA+G+T IFNK R E+ SG  +   G +  P    S  P     CC
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCC

Arabidopsis top hits

e value

%identity

Alignment

AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein

8.5e-21

65.75

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSG----KPQAKWFCCIQS
        MA+KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR EKK GG+  SPGK   P    +G    KP  KWFCCI++
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSG----KPQAKWFCCIQS

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein

8.8e-18

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Query:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALR-PAAAGSGKP
        M++KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+      +G G P
Subjt:  MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALR-PAAAGSGKP

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein

4.4e-17

70.69

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Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALR-PAAAGSGKP
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+      +G G P
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALR-PAAAGSGKP

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein

1.0e-21

62.34

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Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKA----LRPAAAGSGKPQ-AKWFCCIQSPPTES
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+    ++       KPQ  KW CC+Q+P  +S
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKA----LRPAAAGSGKPQ-AKWFCCIQSPPTES

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein

5.0e-13

52.56

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Query:  MAE-KGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGS-PGKALRPA-----------AAGSGKPQAKWFC
        MAE KG+PLPKFGEWDVNNPASAEGFTVIF+KA  EKK+    G+ P   + P            ++ + K + KWFC
Subjt:  MAE-KGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGS-PGKALRPA-----------AAGSGKPQAKWFC

Sequences

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CDS sequence

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ATGGCGGAGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTTAATAACCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGATGTGAGAAGAA
ATCCGGTGGCCAAATCGGATCACCTGGAAAGGCACTAAGGCCTGCAGCAGCAGGCTCTGGCAAACCTCAGGCAAAATGGTTCTGCTGCATTCAGAGCCCACCTACAGAAT
CTTGA

mRNA sequence

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TTTTAGCTTTTTAATTAATTTAGCCGATATTTATTATTATTATTATTAATTATTTAGAATCGAAATAAAAGGCAGCAGTTGGAGGCCGATTTGGCATAAACAAAATCTCT
TCTTCTTGTCTCTCTTGCTCGCTCCTCTCCTTCTCCTGGTGTCGCCATCCTCTTTCTTCCCTTCTTCCGTTCTTCGTTTTGGCCGATTATCTTCTCCTTTTTCCCAATTT
CTGCAATCATGGCGGAGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTTAATAACCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGATGT
GAGAAGAAATCCGGTGGCCAAATCGGATCACCTGGAAAGGCACTAAGGCCTGCAGCAGCAGGCTCTGGCAAACCTCAGGCAAAATGGTTCTGCTGCATTCAGAGCCCACC
TACAGAATCTTGATGGTACTACCTGTCTGTAGATAACCACCGAAACGGCCTAAGATCGTCCACTGGTCTTCGAAGAAGATGAGATTTTCAAAGCTGTGATCATCAGCCTG
CTATACTATTTGCTTCATAATCTGGGTCATGGAGGAAAAAGGTAGAACAATTTTACCTTCTTTGTTTGTGATACTGATATGATGAATTGTCACTAGAAGCTGAGCTATTC
CATCTCATTTGTCTCTACCTCCTTTTTGCCCCTTTTTGCTCCTTATATCTTATATTCAATCTCTATTATTGTTTCTG

Protein sequence

Show/hide protein sequence

MAEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES

Carg22332 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome