CuGenDBv2

Gene ID	Carg22339
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein CWC15 homolog
Genome location	Carg_Chr16:7500901..7506203
RNA-Seq Expression	Carg22339
Synteny	Carg22339
Gene Ontology terms	GO:0045292 - mRNA cis splicing, via spliceosome (biological process) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR006973 - Pre-mRNA-splicing factor Cwf15/Cwc15

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577507.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-113

99.13

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSDSESDDDDE DDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

KAG7015567.1 Protein CWC15-like A [Cucurbita argyrosperma subsp. argyrosperma]

3.5e-115

100

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

XP_022932353.1 protein CWC15 homolog [Cucurbita moschata]

6.6e-114

99.13

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSDSESDDDDED+DEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

XP_022965169.1 protein CWC15 homolog [Cucurbita maxima]

2.3e-114

99.13

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVD+KSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

XP_023553384.1 protein CWC15 homolog [Cucurbita pepo subsp. pepo]

6.6e-114

99.13

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFL KYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1F1Z0 protein CWC15 homolog

3.2e-114

99.13

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSDSESDDDDED+DEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

A0A6J1GEX7 protein CWC15 homolog isoform X2

1.0e-112

97.39

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDR+HRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSD+ESDDD++DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFL KYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

A0A6J1HQ93 protein CWC15 homolog

1.1e-114

99.13

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVD+KSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

A0A6J1KV80 protein CWC15 homolog isoform X2

1.0e-112

97.39

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDR+HRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSD+ESDDD++DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK
        ARGETKTPKRFINDTIRNDFHRKFL KYMK
Subjt:  ARGETKTPKRFINDTIRNDFHRKFLQKYMK

A0A6J1KXM9 protein CWC15 homolog isoform X1

1.9e-111

97.4

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDR+HRKGSQ LLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDE-DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKN
        RIIPRSLDADDSDVDVKSD+ES DDDE DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKN
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDE-DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKN

Query:  QARGETKTPKRFINDTIRNDFHRKFLQKYMK
        QARGETKTPKRFINDTIRNDFHRKFL KYMK
Subjt:  QARGETKTPKRFINDTIRNDFHRKFLQKYMK

SwissProt top hits

e value

%identity

Alignment

Q0VFP5 Protein CWC15 homolog

4.8e-43

48.95

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    REH           K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN-----EQPASFSVKRRWDDDV
        +I   +LDADD      +D ++DDD ++D +DDT ALLAELE+IKKERAEE+ RKE +++ EE +++   +L GNPLLN     +  A+F VKRRWDDDV
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN-----EQPASFSVKRRWDDDV

Query:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK
        VFKN A+G  E K  KRF+NDT+R++FH+KF++KY+K
Subjt:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK

Q5BJP2 Spliceosome-associated protein CWC15 homolog

3.7e-43

49.79

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    REH   S       K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV
        +I   +LDADD      +D E +D +E+ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN     QP A+F VKRRWDDDV
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV

Query:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK
        VFKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Subjt:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK

Q5RE65 Spliceosome-associated protein CWC15 homolog

3.7e-43

49.79

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    REH   S       K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV
        +I   +LDADD      +D E +D +E+ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN     QP A+F VKRRWDDDV
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV

Query:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK
        VFKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Subjt:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK

Q9JHS9 Spliceosome-associated protein CWC15 homolog

3.7e-43

49.79

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    REH   S       K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV
        +I   +LDADD      +D E +D +E+ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN     QP A+F VKRRWDDDV
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV

Query:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK
        VFKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Subjt:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK

Q9P013 Spliceosome-associated protein CWC15 homolog

3.7e-43

49.79

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    REH   S       K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV
        +I   +LDADD      +D E +D +E+ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN     QP A+F VKRRWDDDV
Subjt:  RIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-ASFSVKRRWDDDV

Query:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK
        VFKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Subjt:  VFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK

Arabidopsis top hits

e value

%identity

Alignment

AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein

5.2e-93

79.65

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY-DDREHRKGSQFLLEGGKRDIE
        MTTAARPTWAPAKGGNEQGG RIFGPSQKYSSRD+A+HTTLKPR+EGQ T +ELQ+ NLRDELE+RERRHFSSK+KSY DDR+ R+GSQ LLE  KRD E
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY-DDREHRKGSQFLLEGGKRDIE

Query:  DRIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKN
        +RIIPRS+DADDSDVD+KSD +SDD+ +DDDEDDTEAL+AEL+QIKKER EE+LRKE++++ EEL  KE ELL+GNPLLN  P SFSVKRRWDDDVVFKN
Subjt:  DRIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKN

Query:  QARGETKTPKRFINDTIRNDFHRKFLQKYMK
        QARGE K PKRFINDTIRNDFHRKFL +YMK
Subjt:  QARGETKTPKRFINDTIRNDFHRKFLQKYMK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTACTGCAGCTCGACCAACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGCACTCGAATTTTCGGCCCATCCCAGAAATATTCATCCAGAGATATTGCTTC
TCATACGACCTTGAAACCCAGAAAGGAAGGTCAAGATACCCATGATGAATTGCAGAGGAGGAATCTCAGGGACGAGTTGGAAGATCGTGAAAGGAGGCATTTTTCATCAA
AGAATAAGTCATATGATGATAGAGAACATAGAAAAGGAAGCCAATTTCTGTTAGAAGGTGGAAAGAGAGATATCGAAGATCGGATTATTCCACGAAGTTTAGATGCTGAC
GATTCTGATGTGGATGTCAAAAGTGACAGTGAGAGTGATGACGACGACGAAGACGATGATGAGGATGATACTGAAGCGCTTTTGGCTGAGCTGGAACAAATAAAGAAGGA
AAGAGCAGAGGAAAAGCTTCGAAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAAGAAGCGGAGTTACTCAGAGGAAATCCGCTGCTTAATGAGCAGCCTGCCT
CTTTTAGTGTCAAAAGAAGATGGGATGATGATGTTGTGTTCAAGAATCAGGCCCGTGGTGAAACAAAGACTCCTAAGCGCTTTATAAACGACACCATTAGGAATGACTTC
CACCGAAAATTCTTGCAGAAGTACATGAAGTAA

mRNA sequence

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TCTGACTTACAAATTCGCAGACCGATCATCAATCAATTAGAAGGGGGACTCCTGAGGTATATCTTGTAATGTTCCTTCATGTATTTATGTGTTCTAGCGCATCAAGTTTA
CTTTTTTGTTCTTTGAATTCGATTCCAATCAAGTTTATTGAGCTAGGGTTTTCTCTGGTTTGTGTGGGGGAATTTTCGTTTTTATATGCTGAATCTGAAGTGTAACTTCT
TCAATTTTCTTGGCATTTGAAGGCCCGAGGCGACGAGGAAAAAATCTAGAGATGACTACTGCAGCTCGACCAACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGG
CACTCGAATTTTCGGCCCATCCCAGAAATATTCATCCAGAGATATTGCTTCTCATACGACCTTGAAACCCAGAAAGGAAGGTCAAGATACCCATGATGAATTGCAGAGGA
GGAATCTCAGGGACGAGTTGGAAGATCGTGAAAGGAGGCATTTTTCATCAAAGAATAAGTCATATGATGATAGAGAACATAGAAAAGGAAGCCAATTTCTGTTAGAAGGT
GGAAAGAGAGATATCGAAGATCGGATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGATGTCAAAAGTGACAGTGAGAGTGATGACGACGACGAAGACGATGA
TGAGGATGATACTGAAGCGCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCAGAGGAAAAGCTTCGAAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCA
AAGAAGCGGAGTTACTCAGAGGAAATCCGCTGCTTAATGAGCAGCCTGCCTCTTTTAGTGTCAAAAGAAGATGGGATGATGATGTTGTGTTCAAGAATCAGGCCCGTGGT
GAAACAAAGACTCCTAAGCGCTTTATAAACGACACCATTAGGAATGACTTCCACCGAAAATTCTTGCAGAAGTACATGAAGTAACATGGTTATCAAAATCTAAGACCAAG
TAAATCTAGAGTGAGGTGAGCCCTACAACTGTGTACGTATCATAACACGTTGAAAATACTCGACATTTGTTTTATCTGCATATCATAGCAACTTAAACATGCATCGAATG
ATCTAGTCTGTGTTCTCAATTGGACGAATGAGTATTAAAATGGTTTCATAAGAACCTGTCTTACCTCATATTTTACATGGAAATGATGCTTTTGTTCAAATATTA

Protein sequence

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MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQFLLEGGKRDIEDRIIPRSLDAD
DSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDF
HRKFLQKYMK

Carg22339 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome