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Carg22359 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22359
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsyntaxin-52-like
Genome locationCarg_Chr16:7127512..7127742
RNA-Seq ExpressionCarg22359
SyntenyCarg22359
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577484.1 DNA topoisomerase 1 alpha, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2998.61Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

KAG7015548.1 Syntaxin-52, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-32100Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPLYVMS
        MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPLYVMS
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPLYVMS

XP_022932220.1 syntaxin-52-like [Cucurbita moschata]4.8e-2998.61Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

XP_022965165.1 syntaxin-52-like [Cucurbita maxima]1.4e-2897.22Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHAS IRRKITILGTKVDGLESLLLKLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

XP_023553408.1 syntaxin-52-like [Cucurbita pepo subsp. pepo]5.3e-2895.83Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MASSDLWL+EYNEASKLGDDINGMISERSSVPATGPEAQRHA AIRRKITILGTKVDGLESLLLKLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

TrEMBL top hitse value%identityAlignment
A0A0A0L4X9 t-SNARE coiled-coil homology domain-containing protein2.8e-2791.67Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MA SDLW+KEYNEASKLGDDINGMISERSS PATGPE+QRHASAIRRKITILGTKVDGL+SLLLKLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

A0A1S3BLB5 syntaxin-51-like1.4e-2690.28Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MA SDLW+KEYNEASKLGDDINGMISERSS PATGPE+QRHASAIRRKITILGTKVDGL+SLL KLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

A0A5A7VFH6 Syntaxin-51-like1.4e-2690.28Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MA SDLW+KEYNEASKLGDDINGMISERSS PATGPE+QRHASAIRRKITILGTKVDGL+SLL KLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

A0A6J1EVS2 syntaxin-52-like2.3e-2998.61Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

A0A6J1HKY8 syntaxin-52-like6.7e-2997.22Show/hide
Query:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL
        MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHAS IRRKITILGTKVDGLESLLLKLPVK PL
Subjt:  MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPL

SwissProt top hitse value%identityAlignment
Q94KK7 Syntaxin-524.7e-1967.65Show/hide
Query:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK
        +SSD W++EYNEA KL +DINGM+SER++   TGP+AQR ASAIRRKITILGT++D L+SLL+K+P K
Subjt:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK

Q9SA23 Syntaxin-515.7e-1766.15Show/hide
Query:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL
        +SSD W++ YNEA KL ++INGMISERSS   TGP+AQR ASAIRRKITI G K+D L+SLL ++
Subjt:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL

Arabidopsis top hitse value%identityAlignment
AT1G16240.1 syntaxin of plants 514.1e-1866.15Show/hide
Query:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL
        +SSD W++ YNEA KL ++INGMISERSS   TGP+AQR ASAIRRKITI G K+D L+SLL ++
Subjt:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL

AT1G16240.2 syntaxin of plants 514.1e-1866.15Show/hide
Query:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL
        +SSD W++ YNEA KL ++INGMISERSS   TGP+AQR ASAIRRKITI G K+D L+SLL ++
Subjt:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL

AT1G16240.3 syntaxin of plants 514.1e-1866.15Show/hide
Query:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL
        +SSD W++ YNEA KL ++INGMISERSS   TGP+AQR ASAIRRKITI G K+D L+SLL ++
Subjt:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKL

AT1G79590.1 syntaxin of plants 523.3e-2067.65Show/hide
Query:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK
        +SSD W++EYNEA KL +DINGM+SER++   TGP+AQR ASAIRRKITILGT++D L+SLL+K+P K
Subjt:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK

AT1G79590.2 syntaxin of plants 523.3e-2067.65Show/hide
Query:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK
        +SSD W++EYNEA KL +DINGM+SER++   TGP+AQR ASAIRRKITILGT++D L+SLL+K+P K
Subjt:  ASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTGATTTATGGTTAAAGGAATATAATGAAGCCTCTAAGCTTGGGGATGATATCAATGGCATGATTTCTGAAAGAAGTTCCGTTCCTGCAACTGGACCAGA
AGCTCAACGTCATGCCTCTGCGATTCGGAGGAAGATCACGATTTTGGGGACTAAAGTTGATGGCTTAGAGTCCCTTTTGTTGAAGCTTCCTGTAAAGCTGCCCCTGTATG
TCATGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTGATTTATGGTTAAAGGAATATAATGAAGCCTCTAAGCTTGGGGATGATATCAATGGCATGATTTCTGAAAGAAGTTCCGTTCCTGCAACTGGACCAGA
AGCTCAACGTCATGCCTCTGCGATTCGGAGGAAGATCACGATTTTGGGGACTAAAGTTGATGGCTTAGAGTCCCTTTTGTTGAAGCTTCCTGTAAAGCTGCCCCTGTATG
TCATGTCTTAA
Protein sequenceShow/hide protein sequence
MASSDLWLKEYNEASKLGDDINGMISERSSVPATGPEAQRHASAIRRKITILGTKVDGLESLLLKLPVKLPLYVMS