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Carg22375 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22375
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionStigma-specific STIG1-like protein 4
Genome locationCarg_Chr01:9366096..9366610
RNA-Seq ExpressionCarg22375
SyntenyCarg22375
Gene Ontology termsNA
InterPro domainsIPR006969 - Stigma-specific protein Stig1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646024.1 hypothetical protein Csa_016874 [Cucumis sativus]3.5e-2252.63Show/hide
Query:  LSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGFCG
        ++ LAH+ LLLSLFF +  + E        SPWL  KL+D  + D +   +  HNCS KQ FC K  + G   KRKKIM+CCKHRCVD  SD++NCG+CG
Subjt:  LSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGFCG

Query:  KICPFPRRCCRAEP
        KICPFP++CC+A P
Subjt:  KICPFPRRCCRAEP

KAG6607787.1 hypothetical protein SDJN03_01129, partial [Cucurbita argyrosperma subsp. sororia]7.6e-78100Show/hide
Query:  MPLSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGWKRKKIMRCCKHRCVDVRSDVENCGFCG
        MPLSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGWKRKKIMRCCKHRCVDVRSDVENCGFCG
Subjt:  MPLSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGWKRKKIMRCCKHRCVDVRSDVENCGFCG

Query:  KICPFPRRCCRAEPKGRWKPLYSSKDRCSAGGGLAE
        KICPFPRRCCRAEPKGRWKPLYSSKDRCSAGGGLAE
Subjt:  KICPFPRRCCRAEPKGRWKPLYSSKDRCSAGGGLAE

TYK23073.1 stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]2.5e-2051.79Show/hide
Query:  LSTLAHLSLLLSLFF--LIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGF
        ++  AH+ LLLSL F  LIQAE          SPWL  KL++    + D   +   NCS KQ FC K  + G  WK+KKIM+CCKHRCVD  SD++NCG+
Subjt:  LSTLAHLSLLLSLFF--LIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGF

Query:  CGKICPFPRRCC
        CGKICPFP++CC
Subjt:  CGKICPFPRRCC

XP_022139655.1 stigma-specific STIG1-like protein 1 [Momordica charantia]1.7e-1343.7Show/hide
Query:  PLSTLAHLSLLLSLFFLIQAEP------EPEPEPLPSSPWLNNKL--DDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGW-KRKKIMRCCKHRCVDVRSD
        P   +  + +L+ L FL++AE             L  SPWL  K+  +DY +      +F  H CS K   C K  +DG  +RKK M+CCK+RCVDV SD
Subjt:  PLSTLAHLSLLLSLFFLIQAEP------EPEPEPLPSSPWLNNKL--DDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGW-KRKKIMRCCKHRCVDVRSD

Query:  VENCGFCGKICPFPRRCCR
        V NCGFCG+ C FPR+CCR
Subjt:  VENCGFCGKICPFPRRCCR

XP_038900147.1 stigma-specific STIG1-like protein 1 [Benincasa hispida]4.7e-1951.33Show/hide
Query:  LSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADI---EFFQNHNCSRKQHFCWKNQKDGWK-RKKIMRCCKHRCVDVRSDVENCGF
        ++ LAH+ LL+SL F I  E E        SPWL  KL+D  D++ D      F  H+CS KQ FC K   DG +  KKIM+CCKHRCVD  SDV+NCG 
Subjt:  LSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADI---EFFQNHNCSRKQHFCWKNQKDGWK-RKKIMRCCKHRCVDVRSDVENCGF

Query:  CGKICPFPRRCCR
        C KICPFP++CC+
Subjt:  CGKICPFPRRCCR

TrEMBL top hitse value%identityAlignment
A0A0A0K719 Uncharacterized protein6.4e-2240.96Show/hide
Query:  LSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGFCG
        ++ LAH+ LLLSLFF +  + E        SPWL  KL+D  + D +   +  HNCS KQ FC K  + G   KRKKIM+CCKHRCVD  SD++NCG+CG
Subjt:  LSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGFCG

Query:  KICPFPRRCCRA---------------------------------------EPKGRWKPLYSSKDR
        KICPFP++CC+                                         PKG WKP  S KDR
Subjt:  KICPFPRRCCRA---------------------------------------EPKGRWKPLYSSKDR

A0A5A7U868 Stigma-specific STIG1-like protein 48.1e-0975Show/hide
Query:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCC
        M+CCKHRCVD  SD++NCG+CGKICPFP++CC
Subjt:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCC

A0A5D3DHL9 Stigma-specific STIG1-like protein 41.2e-2051.79Show/hide
Query:  LSTLAHLSLLLSLFF--LIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGF
        ++  AH+ LLLSL F  LIQAE          SPWL  KL++    + D   +   NCS KQ FC K  + G  WK+KKIM+CCKHRCVD  SD++NCG+
Subjt:  LSTLAHLSLLLSLFF--LIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDG--WKRKKIMRCCKHRCVDVRSDVENCGF

Query:  CGKICPFPRRCC
        CGKICPFP++CC
Subjt:  CGKICPFPRRCC

A0A6J1CCX1 stigma-specific STIG1-like protein 18.4e-1443.7Show/hide
Query:  PLSTLAHLSLLLSLFFLIQAEP------EPEPEPLPSSPWLNNKL--DDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGW-KRKKIMRCCKHRCVDVRSD
        P   +  + +L+ L FL++AE             L  SPWL  K+  +DY +      +F  H CS K   C K  +DG  +RKK M+CCK+RCVDV SD
Subjt:  PLSTLAHLSLLLSLFFLIQAEP------EPEPEPLPSSPWLNNKL--DDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGW-KRKKIMRCCKHRCVDVRSD

Query:  VENCGFCGKICPFPRRCCR
        V NCGFCG+ C FPR+CCR
Subjt:  VENCGFCGKICPFPRRCCR

A0A6N2KJW1 Uncharacterized protein3.4e-0772.73Show/hide
Query:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCCR
        MRCC+H+C DV SDV NCGFCGK CPF  +CCR
Subjt:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCCR

SwissProt top hitse value%identityAlignment
Q9C6P6 Stigma-specific STIG1-like protein 42.0e-0456.25Show/hide
Query:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCC
        MRCC+++CVDV SD  +C FC K C F   CC
Subjt:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCC

Arabidopsis top hitse value%identityAlignment
AT1G11925.1 Stigma-specific Stig1 family protein9.2e-0550Show/hide
Query:  CCKHRCVDVRSDVENCGFCGKICPFPRRCC
        CC+ +CVD+R++  NCG CGK C +   CC
Subjt:  CCKHRCVDVRSDVENCGFCGKICPFPRRCC

AT1G50650.1 Stigma-specific Stig1 family protein1.4e-0556.25Show/hide
Query:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCC
        MRCC+++CVDV SD  +C FC K C F   CC
Subjt:  MRCCKHRCVDVRSDVENCGFCGKICPFPRRCC

AT1G53130.1 Stigma-specific Stig1 family protein1.6e-0445.95Show/hide
Query:  KRKKIMRCCKHRCVDVRSDVENCGFCGKICPFPRRCC
        K   ++ CCK  C +V  D  NCG CG  C F +RCC
Subjt:  KRKKIMRCCKHRCVDVRSDVENCGFCGKICPFPRRCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTCTCAACCTTAGCCCATCTTTCCCTTCTCCTCTCCCTCTTCTTCCTCATCCAAGCCGAACCCGAACCCGAACCCGAACCCTTACCCTCGTCCCCGTGGCTAAA
CAACAAGCTCGACGATTACACCGACCACGATGCCGATATCGAGTTTTTTCAAAACCATAATTGCTCCCGAAAACAACACTTCTGTTGGAAGAATCAAAAGGATGGATGGA
AGAGAAAGAAGATCATGAGGTGTTGTAAACATCGATGTGTTGATGTTCGGTCCGACGTCGAAAACTGCGGGTTTTGTGGTAAGATCTGCCCGTTTCCGCGACGATGTTGT
AGAGCCGAACCGAAGGGACGGTGGAAGCCATTGTATTCATCGAAGGATCGCTGCTCGGCCGGCGGTGGACTGGCAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTCTCAACCTTAGCCCATCTTTCCCTTCTCCTCTCCCTCTTCTTCCTCATCCAAGCCGAACCCGAACCCGAACCCGAACCCTTACCCTCGTCCCCGTGGCTAAA
CAACAAGCTCGACGATTACACCGACCACGATGCCGATATCGAGTTTTTTCAAAACCATAATTGCTCCCGAAAACAACACTTCTGTTGGAAGAATCAAAAGGATGGATGGA
AGAGAAAGAAGATCATGAGGTGTTGTAAACATCGATGTGTTGATGTTCGGTCCGACGTCGAAAACTGCGGGTTTTGTGGTAAGATCTGCCCGTTTCCGCGACGATGTTGT
AGAGCCGAACCGAAGGGACGGTGGAAGCCATTGTATTCATCGAAGGATCGCTGCTCGGCCGGCGGTGGACTGGCAGAGTAG
Protein sequenceShow/hide protein sequence
MPLSTLAHLSLLLSLFFLIQAEPEPEPEPLPSSPWLNNKLDDYTDHDADIEFFQNHNCSRKQHFCWKNQKDGWKRKKIMRCCKHRCVDVRSDVENCGFCGKICPFPRRCC
RAEPKGRWKPLYSSKDRCSAGGGLAE