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Carg22408 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22408
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAD-dependent protein deacetylase HST1-like
Genome locationCarg_Chr01:9168088..9168639
RNA-Seq ExpressionCarg22408
SyntenyCarg22408
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607754.1 hypothetical protein SDJN03_01096, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5799.19Show/hide
Query:  IFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEKQTTVFTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSD
        +FLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEKQTTVFTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSD
Subjt:  IFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEKQTTVFTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSD

Query:  EELNRKFDEFIKRMKEEIIEDAQK
        EELNRKFDEFIKRMKEEIIEDAQK
Subjt:  EELNRKFDEFIKRMKEEIIEDAQK

KAG7024968.1 hypothetical protein SDJN02_13788, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2851.79Show/hide
Query:  NQTLQKVTKLLFSISLLSFFFTL--PSW----LFH-SPILRSS--NQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFS-VYELDPLSPPTML
        +QTL+KVTKLLFS+SL SF F L  P+W    LFH SP  R    NQPIDKN +FLLCN LLVFLA YSGLFKSLS+S  ++D  S +Y+  PLS P   
Subjt:  NQTLQKVTKLLFSISLLSFFFTL--PSW----LFH-SPILRSS--NQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFS-VYELDPLSPPTML

Query:  EDEKQTTVFTTTTRG--KNDESEERTISIPEIGDDD----------------VEEHDDRT--TDEEGNDDALSDEELNRKFDEFIKRMKEEIIED
        E  ++  +  T T    KND+ +ER +S PE G++D                VE+    T   +EEGN   LSDEEL RKFDEFIKRMKEEI+ D
Subjt:  EDEKQTTVFTTTTRG--KNDESEERTISIPEIGDDD----------------VEEHDDRT--TDEEGNDDALSDEELNRKFDEFIKRMKEEIIED

KAG7037330.1 hypothetical protein SDJN02_00955, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-92100Show/hide
Query:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK
        MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK
Subjt:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK

Query:  QTTVFTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQKNSSGSLISN
        QTTVFTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQKNSSGSLISN
Subjt:  QTTVFTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQKNSSGSLISN

XP_022981623.1 uncharacterized protein LOC111480689 [Cucurbita maxima]3.3e-7690.4Show/hide
Query:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK
        MADQ NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPIL SSNQPIDKNF+FLLCNGLLVFLAKYSGLFKSLSTS+PNYDAFSVYELD LSPPTMLEDEK
Subjt:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK

Query:  QTTVFT---TTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQK
        QTTV T   TTTR KNDESEE+TISI EIGDD+VEE DDRT DEEGNDDAL+DEELNRKFDEFIKRMKEEII+DAQK
Subjt:  QTTVFT---TTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQK

XP_023525692.1 uncharacterized protein LOC111789225 [Cucurbita pepo subsp. pepo]3.1e-8291.35Show/hide
Query:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK
        MADQ NNQTLQKVTKLLFSISLLSFFF LPSWLFHSPIL SSNQPIDKNF+FLLCNGLLVFLAKYSGLFKSLST RPNYD FSVYELDPLSPPTMLEDEK
Subjt:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK

Query:  QTTV--FTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQKNSSGSLISN
        QTTV   TTTT+ +NDESEERTISIPEIG+D+VEEHDDRTTDE+GNDDALSDEELNRKFDEFIKRMKEEIIEDAQK+SSGSLISN
Subjt:  QTTV--FTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQKNSSGSLISN

TrEMBL top hitse value%identityAlignment
A0A0A0K300 Uncharacterized protein2.5e-2145.56Show/hide
Query:  NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYD-------AFSVYELDPLSPPTMLE-
        ++QTL+KVTKLLFSISL SFF T   + FH       NQPIDKN +FLLCN LLVFLA YSGLFKSLS+S  +          F  + LD L  P+ +  
Subjt:  NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYD-------AFSVYELDPLSPPTMLE-

Query:  ---DEKQTTVFTTTTRGKNDESEERTISIPEIGDDD---VEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIED
           +EK+          +  + +   +     G +    VE   +   ++E N   +SDEELNRKFDEFIKRMKEEII D
Subjt:  ---DEKQTTVFTTTTRGKNDESEERTISIPEIGDDD---VEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIED

A0A1S3CI71 uncharacterized protein LOC1035012397.1e-2449.19Show/hide
Query:  NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDA---FSVYELDPLSPPTMLE----D
        ++ TL+KVTKLLFS+SL SFFFT   + FH       NQPIDKN +FLLCN LLVFLA YSGLFKSLS+S  + D    F  + LD L  P+       +
Subjt:  NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDA---FSVYELDPLSPPTMLE----D

Query:  EKQTTVFTTTTRGKNDESEE---------RTISIPEIGDDDVEEHDD---RTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIED
        EK+      T   +  E EE          T  + E+   + EE DD      +EEGN   +SDEELNRKFDEFIKRMKEEII D
Subjt:  EKQTTVFTTTTRGKNDESEE---------RTISIPEIGDDDVEEHDD---RTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIED

A0A6J1F6C4 uncharacterized protein LOC1114427425.6e-2951.79Show/hide
Query:  NQTLQKVTKLLFSISLLSFFFTL--PSW----LFH-SPILRSS--NQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFS-VYELDPLSPPTML
        +QTL+KVTKLLFS+SL SF F L  P+W    LFH SP  R    NQPIDKN +FLLCN LLVFLA YSGLFKSLS+S  ++D  S +Y+  PLS P   
Subjt:  NQTLQKVTKLLFSISLLSFFFTL--PSW----LFH-SPILRSS--NQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFS-VYELDPLSPPTML

Query:  EDEKQTTVFTTTTRG--KNDESEERTISIPEIGDDD----------------VEEHDDRT--TDEEGNDDALSDEELNRKFDEFIKRMKEEIIED
        E  ++  +  T T    KND+ +ER +S PE G++D                VE+    T   +EEGN   LSDEEL RKFDEFIKRMKEEI+ D
Subjt:  EDEKQTTVFTTTTRG--KNDESEERTISIPEIGDDD----------------VEEHDDRT--TDEEGNDDALSDEELNRKFDEFIKRMKEEIIED

A0A6J1IEZ8 uncharacterized protein LOC1114758271.4e-2750.26Show/hide
Query:  NQTLQKVTKLLFSISLLSFFFTL--PSW----LFH-SPILRSS--NQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFS-VYELDPLSPPTML
        +QTL+KVTKLLFS+SL SF F L  P+W    LFH SP  R    NQPIDKN +FLLCN LLVFLA YSGLFKSLS+S  ++D  S +Y+  PL  P   
Subjt:  NQTLQKVTKLLFSISLLSFFFTL--PSW----LFH-SPILRSS--NQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFS-VYELDPLSPPTML

Query:  EDEKQTTVFTTTTRG--KNDESEERTISIPEIGDDD-------------VEEHDDRTT-----DEEGNDDALSDEELNRKFDEFIKRMKEEIIED
        E  ++  +  T      KND+ +ER +S PE  ++D               E +D T      +EEGN   LSDEEL RKFDEFIKRMKEEI+ D
Subjt:  EDEKQTTVFTTTTRG--KNDESEERTISIPEIGDDD-------------VEEHDDRTT-----DEEGNDDALSDEELNRKFDEFIKRMKEEIIED

A0A6J1J2L4 uncharacterized protein LOC1114806891.6e-7690.4Show/hide
Query:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK
        MADQ NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPIL SSNQPIDKNF+FLLCNGLLVFLAKYSGLFKSLSTS+PNYDAFSVYELD LSPPTMLEDEK
Subjt:  MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEK

Query:  QTTVFT---TTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQK
        QTTV T   TTTR KNDESEE+TISI EIGDD+VEE DDRT DEEGNDDAL+DEELNRKFDEFIKRMKEEII+DAQK
Subjt:  QTTVFT---TTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04495.1 unknown protein8.0e-0427.78Show/hide
Query:  VTKLLFSISLLSFFFTLPSWLF----HSPILRSSNQPIDKNFIFLLCNGLLVF-LAKYSGLFKSLSTSR----------------PNYDAFSVYELDPLS
        VTK++   S+ SF  +  S +        +L   +  +DK ++FLLCNG++ F L  + G  +SLS  +                       V  L    
Subjt:  VTKLLFSISLLSFFFTLPSWLF----HSPILRSSNQPIDKNFIFLLCNGLLVF-LAKYSGLFKSLSTSR----------------PNYDAFSVYELDPLS

Query:  PPTMLEDEKQTTVFTTTTRGKNDESEERTISIPE---IGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEI
          +  E+E++        RG  +E     + + E   + D  +   DD   DEE ND  LS E+LN+K ++FI++MK EI
Subjt:  PPTMLEDEKQTTVFTTTTRGKNDESEERTISIPE---IGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEI

AT2G04515.1 unknown protein3.6e-0427.78Show/hide
Query:  VTKLLFSISLLSFFFTLPSWLF----HSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEKQTTV----
        VTK++   S+ SF  +  S +        +L   +  +DK ++FLLCNG++ F+    G F   S S  +  A ++ E    +    ++D K+T V    
Subjt:  VTKLLFSISLLSFFFTLPSWLF----HSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEKQTTV----

Query:  -------FTTTTRGK----NDESEERTISIPE-----IGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEI
                +    G+     +E EE  + + E     + D  +   DD   D+  ND  LS E+LN+K ++FI++MK EI
Subjt:  -------FTTTTRGK----NDESEERTISIPE-----IGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEI

AT3G13130.1 unknown protein1.3e-0931Show/hide
Query:  DQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRP------NYDAFSVYELDPLSPPTML
        DQI  + L+K+TK +     +    T   +  +  +++     +DKN++FLLCNGL+V +AK SGL   +++S+P      N D    Y  D  S  T+L
Subjt:  DQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRP------NYDAFSVYELDPLSPPTML

Query:  EDE--------------KQTTVFTTTTRGKNDESEERTISIPEIGDDDVEEH-----DDRTTDEEGNDDAL--SDEELNRKFDEFIKRMKEEIIEDAQKN
        E E              ++ TV   T   + +++EE       + D+D EE           +EEGN   +  ++EE+N+KFDEFI++MKEE+  +A+++
Subjt:  EDE--------------KQTTVFTTTTRGKNDESEERTISIPEIGDDDVEEH-----DDRTTDEEGNDDAL--SDEELNRKFDEFIKRMKEEIIEDAQKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCC
AATTCTCCGCTCTTCCAACCAACCAATCGACAAGAATTTCATATTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCA
CTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGA
GGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAGAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGGGAATGACGACGC
GTTGAGCGATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCC
AATTCTCCGCTCTTCCAACCAACCAATCGACAAGAATTTCATATTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCA
CTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGA
GGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAGAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGGGAATGACGACGC
GTTGAGCGATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATT
AA
Protein sequenceShow/hide protein sequence
MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEKQTTVFTTTTR
GKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQKNSSGSLISN