; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22431 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22431
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationCarg_Chr14:11177877..11179900
RNA-Seq ExpressionCarg22431
SyntenyCarg22431
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018489.1 hypothetical protein SDJN02_20358 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-102100Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEVGITLTIIFVHKSAQLLTEA
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEVGITLTIIFVHKSAQLLTEA
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEVGITLTIIFVHKSAQLLTEA

XP_008453969.1 PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Cucumis melo]3.2e-9097.63Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMA GHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNI+REKYRLTRLEQYKNYENIPSSGAAVDKECKA+
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGH+APTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

XP_022955648.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Cucurbita moschata]1.3e-91100Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

XP_022979745.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Cucurbita maxima]3.8e-9199.41Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGD+EFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

XP_038904422.1 uncharacterized WD repeat-containing protein C2A9.03-like [Benincasa hispida]1.7e-9199.41Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKA+
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

TrEMBL top hitse value%identityAlignment
A0A0A0KXF7 WD_REPEATS_REGION domain-containing protein3.8e-8995.86Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMA GHEMAD+IDDGGDGE GDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNI+REKYRLTRLEQYKNYENIPSSGAAVDKECKA+
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNF+GH+APTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

A0A1S3BX05 uncharacterized WD repeat-containing protein C2A9.03-like1.5e-9097.63Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMA GHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNI+REKYRLTRLEQYKNYENIPSSGAAVDKECKA+
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGH+APTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

A0A5D3D2Z8 Putative WD repeat-containing protein C2A9.03-like1.5e-9097.63Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMA GHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNI+REKYRLTRLEQYKNYENIPSSGAAVDKECKA+
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGH+APTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

A0A6J1GUK0 uncharacterized WD repeat-containing protein C2A9.03-like isoform X16.3e-92100Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

A0A6J1IU81 uncharacterized WD repeat-containing protein C2A9.03-like isoform X21.8e-9199.41Show/hide
Query:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGD+EFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
Subjt:  MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55680.1 Transducin/WD40 repeat-like superfamily protein3.0e-4656.47Show/hide
Query:  DEFDYMAGGHEMADEID-----DGGDGELGD---DEFDMLTKSI-DTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKA
        D+ +YM    +  DE D      G D    D   DEFD     I DTS+  ARKG DIQGIPWDRL+ITRE YR TRLEQYKNYEN+P+SG +  K+C A
Subjt:  DEFDYMAGGHEMADEID-----DGGDGELGD---DEFDMLTKSI-DTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKA

Query:  VEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
         +KG  +Y+F+ NTR +K +ILHFQLRNLVWATSKHDVYLMS Y V H+S+L+    ++LN  GHV+P+E
Subjt:  VEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

AT3G13340.1 Transducin/WD40 repeat-like superfamily protein2.2e-4956.98Show/hide
Query:  DEFDYMAGGHEMADEIDDGGDGEL-GDD---------EFDMLTKSI-DTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKEC
        D+ +YM    +  ++++D  D E  GDD         EFD     + DT++  ARKG DIQGIPWDRLNI+REKYR TRLEQYKNYEN+P+SG + +K C
Subjt:  DEFDYMAGGHEMADEIDDGGDGEL-GDD---------EFDMLTKSI-DTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKEC

Query:  KAVEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        K  +KGG +Y+F+ N+R +K TILHFQLRNLVWATSKHDVYLMSN+ V H+SSL+    E+LN  GHVAP+E
Subjt:  KAVEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

AT3G13340.2 Transducin/WD40 repeat-like superfamily protein2.2e-4956.98Show/hide
Query:  DEFDYMAGGHEMADEIDDGGDGEL-GDD---------EFDMLTKSI-DTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKEC
        D+ +YM    +  ++++D  D E  GDD         EFD     + DT++  ARKG DIQGIPWDRLNI+REKYR TRLEQYKNYEN+P+SG + +K C
Subjt:  DEFDYMAGGHEMADEIDDGGDGEL-GDD---------EFDMLTKSI-DTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKEC

Query:  KAVEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        K  +KGG +Y+F+ N+R +K TILHFQLRNLVWATSKHDVYLMSN+ V H+SSL+    E+LN  GHVAP+E
Subjt:  KAVEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

AT5G56190.1 Transducin/WD40 repeat-like superfamily protein3.1e-5161.63Show/hide
Query:  MDEFD-YMAGGHEMADEID------DGGDGELGDDE---FDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKEC
        M +FD YMA  ++M D  D      DG D +  D E   FD L K+ DTS+A AR G DIQGIPWD L +TR+ YR TRLEQYKNYENIP+SG    K+C
Subjt:  MDEFD-YMAGGHEMADEID------DGGDGELGDDE---FDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKEC

Query:  KAVEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
           EKG ++YEF  N+R V+ TILHFQLRNLVWATSKHDVYL+SNYS+ HWSSL+G  SEILN  GHVAP+E
Subjt:  KAVEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE

AT5G56190.2 Transducin/WD40 repeat-like superfamily protein3.1e-5161.54Show/hide
Query:  EFDYMAGGHEMADEID------DGGDGELGDDE---FDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV
        E +YMA  ++M D  D      DG D +  D E   FD L K+ DTS+A AR G DIQGIPWD L +TR+ YR TRLEQYKNYENIP+SG    K+C   
Subjt:  EFDYMAGGHEMADEID------DGGDGELGDDE---FDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAV

Query:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE
        EKG ++YEF  N+R V+ TILHFQLRNLVWATSKHDVYL+SNYS+ HWSSL+G  SEILN  GHVAP+E
Subjt:  EKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTACCAACAGCAAAATATGGATGAATTTGATTACATGGCGGGTGGGCATGAAATGGCTGATGAAATTGATGATGGGGGTGATGGAGAATTGGGTGACGACGAATT
CGACATGCTTACGAAGTCAATAGATACGTCGTCTGCCCTTGCGAGGAAGGGATTGGACATTCAAGGTATTCCATGGGATCGATTGAACATTACCCGTGAAAAGTATCGAT
TAACAAGGCTTGAACAATATAAAAATTATGAAAATATTCCTTCATCTGGAGCTGCTGTTGATAAGGAATGCAAAGCTGTAGAGAAAGGAGGGAACTACTATGAGTTCTTT
CATAATACAAGATTGGTTAAGCCGACTATCTTGCACTTTCAGTTAAGGAACTTGGTCTGGGCAACTTCAAAACACGATGTCTATTTGATGTCGAACTATTCTGTCATGCA
TTGGTCATCTTTATCTGGCAACTTATCTGAAATCCTCAATTTTTCCGGGCATGTTGCTCCTACAGAGGTCGGTATCACACTTACTATCATCTTTGTGCACAAATCAGCTC
AGTTATTAACAGAAGCATGA
mRNA sequenceShow/hide mRNA sequence
TAGATATGTTTCATACTTAGTTTATCATGTTCTTCATTTTTTTTATTTGATATAATATTAAGTGCATTTAATTTATAATTCGAGAGAGGTCGGTTTGCCGACTCGCTTAA
AACCCCCCACCATCGTTGTTCGTTGTCACTTCTGAGAAATTTTTAGGAAGAGAGGCGCAACGAAACGAAACGACGAATCCATAGGGAGTGAAAACCCTTTTTTTACCAGC
AAGATTTCTGCATTTGATTCCAAAGAAATAGATAGTCAAGGAGTGAATAATCATGTCTTACCAACAGCAAAATATGGATGAATTTGATTACATGGCGGGTGGGCATGAAA
TGGCTGATGAAATTGATGATGGGGGTGATGGAGAATTGGGTGACGACGAATTCGACATGCTTACGAAGTCAATAGATACGTCGTCTGCCCTTGCGAGGAAGGGATTGGAC
ATTCAAGGTATTCCATGGGATCGATTGAACATTACCCGTGAAAAGTATCGATTAACAAGGCTTGAACAATATAAAAATTATGAAAATATTCCTTCATCTGGAGCTGCTGT
TGATAAGGAATGCAAAGCTGTAGAGAAAGGAGGGAACTACTATGAGTTCTTTCATAATACAAGATTGGTTAAGCCGACTATCTTGCACTTTCAGTTAAGGAACTTGGTCT
GGGCAACTTCAAAACACGATGTCTATTTGATGTCGAACTATTCTGTCATGCATTGGTCATCTTTATCTGGCAACTTATCTGAAATCCTCAATTTTTCCGGGCATGTTGCT
CCTACAGAGGTCGGTATCACACTTACTATCATCTTTGTGCACAAATCAGCTCAGTTATTAACAGAAGCATGA
Protein sequenceShow/hide protein sequence
MSYQQQNMDEFDYMAGGHEMADEIDDGGDGELGDDEFDMLTKSIDTSSALARKGLDIQGIPWDRLNITREKYRLTRLEQYKNYENIPSSGAAVDKECKAVEKGGNYYEFF
HNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEVGITLTIIFVHKSAQLLTEA