; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22450 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22450
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionexosome complex component RRP43
Genome locationCarg_Chr03:752594..764060
RNA-Seq ExpressionCarg22450
SyntenyCarg22450
Gene Ontology termsNA
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603214.1 Exosome complex component RRP43, partial [Cucurbita argyrosperma subsp. sororia]8.9e-15999.33Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAV+FHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
        ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS

KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]7.7e-163100Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

XP_022928740.1 exosome complex component RRP43 [Cucurbita moschata]6.5e-16299.34Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

XP_022967860.1 exosome complex component RRP43 [Cucurbita maxima]4.2e-16199.01Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+GG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]1.7e-16299.67Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X17.3e-15995.72Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKE+RKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A1S3CEE1 exosome complex component RRP43 isoform X27.3e-15995.72Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKE+RKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A6J1DFM7 exosome complex component RRP436.8e-15794.74Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERH AESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKE+RKLKL+S+PFSLTC+LHKN+ILADPTAEEES+METIVTVVLD SGQLVSFYKPGGSVLA+TSAVQDCVALTRQR KELQ+ILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A6J1ESF5 exosome complex component RRP433.2e-16299.34Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A6J1HVL5 exosome complex component RRP432.1e-16199.01Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+GG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp437.8e-3330.71Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  IK E+  P   SP+EG I  +  + P+CS   +PG P++ A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS
        +S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA   +++P    ++D + V                +   R ++L++
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS

Query:  LPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR
           S +  +  + +LADPT EEE +    +T++L+SS  +V   K GG+ +     ++ C+ + R +
Subjt:  LPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR

Q2KHU3 Exosome complex component RRP431.3e-4334.63Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK E   P  ++PD+G +  +  + P+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS
         S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA  ++Q+P V +N++  +  V+ +      +K  +N     +  + 
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS

Query:  LPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
          F  T L      + DPT EEE +    +TVV+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE    M+
Subjt:  LPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME

Q8TYC2 Exosome complex component Rrp421.0e-3232.55Show/hide
Query:  RPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADP
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S  ++P   + DD               E E + ++   L +N  P S+T      Y+L DP
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADP

Query:  TAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-AVQDCVALTRQRSKELQ
          EEE +M+T +TV +  SG++ +  K  G +  +    ++D + L  ++++E++
Subjt:  TAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-AVQDCVALTRQRSKELQ

Q96B26 Exosome complex component RRP432.1e-4634.51Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS
         S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +              E   K++  L + +
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS

Query:  LPFSLT-CLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
         P + +  +     ++ DPT EEE +    +T+V+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE I  M+
Subjt:  LPFSLT-CLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME

Q9D753 Exosome complex component RRP436.2e-4635.82Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   P +++PD G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS
         S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V       N +K    K    ++ N 
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNS

Query:  LPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGM
        +  S   +     ++ DPT EEE +    +TVV D  G+L   +KPGGS L   + +QDC++    R KE+  +LDE I  M
Subjt:  LPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGM

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein4.0e-12573.94Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MG+P+AA  DLS+EMEVDAFRR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAK+GSTTMLAAI+MEVMTPS +SPDEGCIA++FHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSP VRPGRPAEAAPVISK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+LQIP+VALND+G++V V+ E+  
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  EN---FEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEA
        +N    EKEAVNKE+RKL L ++PFSLTC+LHKNYILADPT EEES+M+T+VTVVLDSS Q+VSFYK GG+ LAY+SA++ CV L R+R+KEL+ IL E 
Subjt:  EN---FEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEA

Query:  ISGMEID
           M+ID
Subjt:  ISGMEID

AT3G07750.1 3'-5'-exoribonuclease family protein4.9e-2229.29Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  ++G T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   +S+P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPF

Query:  SLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
         +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D +++ +  ++ L   LD  IS  E
Subjt:  SLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME

AT3G07750.2 3'-5'-exoribonuclease family protein4.9e-2229.29Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  ++G T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   +S+P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPF

Query:  SLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
         +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D +++ +  ++ L   LD  IS  E
Subjt:  SLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGAAGACTCTTTCCAATTCAGTTTTTTGAGCGTCATCTCGCTGAATCAAT
ACGTCCTGATGGAAGAGCACTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAACGGATCAGCCCTGGCTAAGGTTGGTTCTACGACAATGT
TGGCTGCTATTAAAATGGAGGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGCATAGCTGTCGATTTCCACATGCCCCCCATATGCTCTCCAATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGC
GTGGATGGCATACTTGGATATTTACTGTTTGGATGCCGACGGATCTCTATTCGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTGG
CTCTAAATGACGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAAGCTGTCAATAAAGAGAGAAGGAAACTGAAATTGAACTCCCTT
CCTTTCTCATTAACATGCCTACTCCACAAGAATTACATCTTGGCTGACCCTACTGCGGAGGAGGAGTCTGTCATGGAAACTATTGTAACCGTGGTCTTGGATTCATCTGG
TCAACTAGTGTCCTTCTACAAACCGGGTGGATCTGTGCTTGCCTATACATCAGCTGTTCAGGATTGTGTTGCACTGACGAGACAAAGATCAAAAGAACTACAGATGATTT
TGGATGAAGCAATTTCTGGTATGGAAATTGACTAA
mRNA sequenceShow/hide mRNA sequence
TTCATTTTTTCTGAAACGTCCTACCTTTCTTGCGCTCATCCCTCCGATTACCAGCTACTGCACCCCAACCCGCACGCCGCTGTCTCAGCCGCCTGAAAAGCTCGCCGCTG
CTACCCCCCGTGTCACGCTCTCTCGTCTCTTTGCGCAATCAGTGCTACTTATAGGCTTCAGCTCCTAACCGCCGCCACTGATAAGAGTACAAACAATGGGACTGCCAAAT
GCTGCTTCTGGGGACTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGAAGACTCTTTCCAATTCAGTTTTTTGAGCGTCATCTCGCTGAATCAATACGTCCTGATGGAAG
AGCACTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAACGGATCAGCCCTGGCTAAGGTTGGTTCTACGACAATGTTGGCTGCTATTAAAA
TGGAGGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGCATAGCTGTCGATTTCCACATGCCCCCCATATGCTCTCCAATTGTTAGGCCTGGGAGACCAGCTGAA
GCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGCGTGGATGGCATACTT
GGATATTTACTGTTTGGATGCCGACGGATCTCTATTCGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTGGCTCTAAATGACGATG
GAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAAGCTGTCAATAAAGAGAGAAGGAAACTGAAATTGAACTCCCTTCCTTTCTCATTAACA
TGCCTACTCCACAAGAATTACATCTTGGCTGACCCTACTGCGGAGGAGGAGTCTGTCATGGAAACTATTGTAACCGTGGTCTTGGATTCATCTGGTCAACTAGTGTCCTT
CTACAAACCGGGTGGATCTGTGCTTGCCTATACATCAGCTGTTCAGGATTGTGTTGCACTGACGAGACAAAGATCAAAAGAACTACAGATGATTTTGGATGAAGCAATTT
CTGGTATGGAAATTGACTAAGTTTTAGGGAGGCCTTCTATATTTTTTTTTTCCTGGTTTAATGAATGAAAAGCTGAATGGTTTGTAGGCTTCCAATTATATACTTAGTTT
GGTTGTCT
Protein sequenceShow/hide protein sequence
MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRP
GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSL
PFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGMEID