CuGenDBv2

Gene ID	Carg22469
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NADH:ubiquinone oxidoreductase, ESSS subunit
Genome location	Carg_Chr03:1012795..1013121
RNA-Seq Expression	Carg22469
Synteny	Carg22469
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK00850.1 uncharacterized protein E5676_scaffold509G00110 [Cucumis melo var. makuwa]

8.8e-53

95.37

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHR LSSLRTRGGAAAG+SRWTSPGHE+RPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME LGIS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GS SSESD
Subjt:  GSVSSESD

XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]

2.0e-52

93.52

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHRLL +LRTRGGAAAGQSRWTSPGHE+RPKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEN+GIS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
         S SSESD
Subjt:  GSVSSESD

XP_022928682.1 uncharacterized protein LOC111435525 [Cucurbita moschata]

1.1e-55

100

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GSVSSESD
Subjt:  GSVSSESD

XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]

3.4e-52

94.44

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHRLL SLRTRGGAA GQSRWTSPGHE++PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENL IS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GS SSESD
Subjt:  GSVSSESD

XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]

1.8e-53

96.3

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHRLL SLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME LG+S
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GS SSESD
Subjt:  GSVSSESD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VJ63 Uncharacterized protein

1.6e-52

94.44

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHR LSSLRTRGGAAAG+SRWTSPGHE+ PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME LGIS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GS SSESD
Subjt:  GSVSSESD

A0A5D3BP74 Uncharacterized protein

4.3e-53

95.37

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHR LSSLRTRGGAAAG+SRWTSPGHE+RPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME LGIS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GS SSESD
Subjt:  GSVSSESD

A0A6J1DCT8 uncharacterized protein LOC111019565

9.5e-53

93.52

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHRLL +LRTRGGAAAGQSRWTSPGHE+RPKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEN+GIS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
         S SSESD
Subjt:  GSVSSESD

A0A6J1EKL9 uncharacterized protein LOC111435525

5.4e-56

100

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GSVSSESD
Subjt:  GSVSSESD

A0A6J1HPH2 uncharacterized protein LOC111466129

1.6e-52

94.44

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Query:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS
        MLRHRLL SLRTRGGAA GQSRWTSPGHE++PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENL IS
Subjt:  MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGIS

Query:  GSVSSESD
        GS SSESD
Subjt:  GSVSSESD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42310.1 unknown protein

2.2e-41

74.76

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Query:  LRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGISG
        LR+R+ S     G  +AG SRW +PGHE+RPKGY  NRTPP PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKALERLEME L  +G
Subjt:  LRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGISG

Query:  SVS
          S
Subjt:  SVS

AT3G57785.1 unknown protein

2.8e-41

80.22

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Query:  GGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGISGSVS
        G  + G SRW +PGHE+RPKGY  NRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKALERLEME L  +G  S
Subjt:  GGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGISGSVS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTCCGGCACCGCCTTCTCTCTTCTCTCCGGACCCGCGGTGGAGCCGCCGCCGGTCAGAGTCGGTGGACCAGTCCTGGCCATGAGGATCGGCCGAAGGGCTATCTTTT
CAATCGGACGCCGCCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATGTTACTAGTTTTCTTACTATTGTGATTCTTGGCGTTGGCCTCAACG
CCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAGGCCCTCGAGCGCCTCGAGATGGAGAACCTAGGTATCTCTGGCTCTGTATCATCTGAATCTGATTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MLRHRLLSSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLGISGSVSSESD

Carg22469 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome