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Carg22480 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22480
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr12:1358577..1360309
RNA-Seq ExpressionCarg22480
SyntenyCarg22480
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020283.1 hypothetical protein SDJN02_16966, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-60100Show/hide
Query:  MVGKYTETPPREDLEANSSQKRVRKERVKVSKRMGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEEYICSHRQRFPDAINGGQEGGGTTQHGGAGEDE
        MVGKYTETPPREDLEANSSQKRVRKERVKVSKRMGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEEYICSHRQRFPDAINGGQEGGGTTQHGGAGEDE
Subjt:  MVGKYTETPPREDLEANSSQKRVRKERVKVSKRMGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEEYICSHRQRFPDAINGGQEGGGTTQHGGAGEDE

Query:  EEESDRVTAAKLPEKVQGMRRTM
        EEESDRVTAAKLPEKVQGMRRTM
Subjt:  EEESDRVTAAKLPEKVQGMRRTM

XP_022951797.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]3.4e-0897.06Show/hide
Query:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
        MG LQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
Subjt:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE

XP_023002540.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]3.4e-0897.06Show/hide
Query:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
        MG LQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
Subjt:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE

XP_023538508.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]7.5e-0894.12Show/hide
Query:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
        MG LQIWHRNKHLSIPFLFFLSVFLFIHLTS+AE
Subjt:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE

TrEMBL top hitse value%identityAlignment
A0A6J1GIN2 Epidermal patterning factor-like protein1.6e-0897.06Show/hide
Query:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
        MG LQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
Subjt:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE

A0A6J1KP85 Epidermal patterning factor-like protein1.6e-0897.06Show/hide
Query:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
        MG LQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE
Subjt:  MGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAAAATACACTGAAACCCCTCCCCGAGAAGATCTCGAGGCTAATTCTTCACAAAAACGAGTTCGAAAAGAGAGAGTAAAGGTCTCTAAAAGGATGGGCAGGCT
TCAAATTTGGCACAGAAACAAACACCTTTCAATTCCCTTCCTCTTCTTCCTCTCTGTTTTCCTCTTCATTCATCTTACGTCCATAGCTGAAGAGTACATTTGTTCACATA
GGCAGAGGTTTCCAGACGCCATTAATGGAGGACAGGAAGGTGGAGGAACAACGCAGCACGGCGGAGCTGGTGAGGATGAGGAGGAGGAGTCAGATAGGGTCACAGCCGCC
AAGCTGCCGGAGAAGGTGCAGGGAATGCGGCGGACCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAAAATACACTGAAACCCCTCCCCGAGAAGATCTCGAGGCTAATTCTTCACAAAAACGAGTTCGAAAAGAGAGAGTAAAGGTCTCTAAAAGGATGGGCAGGCT
TCAAATTTGGCACAGAAACAAACACCTTTCAATTCCCTTCCTCTTCTTCCTCTCTGTTTTCCTCTTCATTCATCTTACGTCCATAGCTGAAGAGTACATTTGTTCACATA
GGCAGAGGTTTCCAGACGCCATTAATGGAGGACAGGAAGGTGGAGGAACAACGCAGCACGGCGGAGCTGGTGAGGATGAGGAGGAGGAGTCAGATAGGGTCACAGCCGCC
AAGCTGCCGGAGAAGGTGCAGGGAATGCGGCGGACCATGTGA
Protein sequenceShow/hide protein sequence
MVGKYTETPPREDLEANSSQKRVRKERVKVSKRMGRLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEEYICSHRQRFPDAINGGQEGGGTTQHGGAGEDEEEESDRVTAA
KLPEKVQGMRRTM