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Carg22499 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22499
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein CutA, chloroplastic
Genome locationCarg_Chr12:1231943..1233629
RNA-Seq ExpressionCarg22499
SyntenyCarg22499
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065110.1 protein CutA [Cucumis melo var. makuwa]6.9e-0488.46Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGSL+YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
KAG7020264.1 hypothetical protein SDJN02_16947, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-48100Show/hide
Query:  MAFTLCSRDAAPLLSASAVQRPVLQSPHLHNGFLSFSLSLSVVCVSLECSCWFTNGKRMSGRRLPVKYRLGMVPEVLALPINGGSLKYLDWIKSSTKD
        MAFTLCSRDAAPLLSASAVQRPVLQSPHLHNGFLSFSLSLSVVCVSLECSCWFTNGKRMSGRRLPVKYRLGMVPEVLALPINGGSLKYLDWIKSSTKD
Subjt:  MAFTLCSRDAAPLLSASAVQRPVLQSPHLHNGFLSFSLSLSVVCVSLECSCWFTNGKRMSGRRLPVKYRLGMVPEVLALPINGGSLKYLDWIKSSTKD
XP_004152609.1 protein CutA, chloroplastic [Cucumis sativus]6.9e-0488.46Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGSL+YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
XP_008444893.1 PREDICTED: protein CutA, chloroplastic [Cucumis melo]6.9e-0488.46Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGSL+YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
XP_038886215.1 protein CutA, chloroplastic [Benincasa hispida]6.9e-0488.46Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGSL+YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
TrEMBL top hitse value%identityAlignment
A0A0A0LRU0 Uncharacterized protein3.3e-0488.46Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGSL+YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
A0A1S3BBF3 protein CutA, chloroplastic3.3e-0488.46Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGSL+YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
A0A5A7VD29 Protein CutA3.3e-0488.46Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGSL+YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
A0A6J1K4I7 protein CutA, chloroplastic7.4e-0484.62Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPINGGS++YL+WIKSSTKD
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
SwissProt top hitse value%identityAlignment
P93009 Protein CutA, chloroplastic4.2e-0469.23Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPI GGS KYL+W+K+ST++
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
Q109R6 Protein CutA 1, chloroplastic8.4e-0569.23Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPI GG+LKYL+W+K+ST++
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD
Arabidopsis top hitse value%identityAlignment
AT2G33740.2 Nitrogen regulatory PII-like, alpha/beta3.0e-0569.23Show/hide
Query:  VPEVLALPINGGSLKYLDWIKSSTKD
        VPEV+ALPI GGS KYL+W+K+ST++
Subjt:  VPEVLALPINGGSLKYLDWIKSSTKD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCACTCTCTGCAGTAGAGACGCGGCTCCTTTGCTATCGGCCTCTGCCGTTCAGCGTCCGGTTCTCCAATCTCCTCATCTTCATAACGGATTCCTATCTTTCTC
TCTCTCTCTCTCTGTCGTTTGCGTCTCTCTTGAGTGTTCTTGTTGGTTTACTAATGGAAAACGTATGTCAGGTCGAAGATTGCCGGTCAAGTACCGGCTGGGGATGGTGC
CTGAAGTTCTTGCTTTGCCTATCAATGGTGGCAGCCTCAAGTACCTAGACTGGATCAAGAGCAGCACGAAGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCACTCTCTGCAGTAGAGACGCGGCTCCTTTGCTATCGGCCTCTGCCGTTCAGCGTCCGGTTCTCCAATCTCCTCATCTTCATAACGGATTCCTATCTTTCTC
TCTCTCTCTCTCTGTCGTTTGCGTCTCTCTTGAGTGTTCTTGTTGGTTTACTAATGGAAAACGTATGTCAGGTCGAAGATTGCCGGTCAAGTACCGGCTGGGGATGGTGC
CTGAAGTTCTTGCTTTGCCTATCAATGGTGGCAGCCTCAAGTACCTAGACTGGATCAAGAGCAGCACGAAGGACTGA
Protein sequenceShow/hide protein sequence
MAFTLCSRDAAPLLSASAVQRPVLQSPHLHNGFLSFSLSLSVVCVSLECSCWFTNGKRMSGRRLPVKYRLGMVPEVLALPINGGSLKYLDWIKSSTKD