; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22528 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22528
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat
Genome locationCarg_Chr12:1008693..1009445
RNA-Seq ExpressionCarg22528
SyntenyCarg22528
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585316.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-13191.2Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNE+IWSM+IAGCRSHGNSELGFYAAEQLLKLRPKDTETY+SLLNMY+SAGRWKDVS VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLMKEEKLGKLKDWSWI+IKEKVYSFKPNDKSH QTAEMY+LLETLLDEVKPLGYEP QY E IEEE G+ETVFSSTIYHSE+LA+AF LLNLP AT IR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVK+IT+CRDCHNFIRF+SLLTGREIVIRD KQLHKFSNGYCSCRGFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

KAG7020234.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-13191.2Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNE+IWSM+IAGCRSHGNSELGFYAAEQLLKLRPKDTETY+SLLNMY+SAGRWKDVS VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLMKEEKLGKLKDWSWI+IKEKVYSFKPNDKSH QTAEMY+LLETLLDEVKPLGYEP QY E IEEE G+ETVFSSTIYHSE+LA+AF LLNLP AT IR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVK+IT+CRDCHNFIRF+SLLTGREIVIRD KQLHKFSNGYCSCRGFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

KAG7020235.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-142100Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

XP_023001915.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima]4.2e-13896.8Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQ +IEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTE+YISLLNMYISAGRWKDVSTVR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLMKEEK+GKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSE+LA+AFGLLNLPKATQIR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVKNIT+CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSC GFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

XP_023538358.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo]6.8e-14198.8Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        K+MKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSE+LAIAFGLLNLPKATQIR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVKNIT+CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

TrEMBL top hitse value%identityAlignment
A0A0A0LRW6 DYW_deaminase domain-containing protein4.2e-12083.53Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQY I+PVMDHFAC+IDMY+RLGRVEEAFDVV KMNFEPNE IWSMLIAGCRSHG S+LGFYAAEQLLKL+PKD ETY+SLLNM+ISAGRWKDVS VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLMKEEK+GKLKDWSWISIKEKVYSFKPNDKSHCQ+ EMYKLLET+L+EVK LGYEP++ +EVIE+E+ +E V SST+ HSE+LAIAFGLLNLP AT IR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGD
        VVK+IT+CRDCHNFIRF+SLL GREIVIRDSKQLHKF NGYCSC G+GD
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGD

A0A6J1BQL4 putative pentatricopeptide repeat-containing protein At5g526307.7e-12286.4Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M KQY I+PVMDHFAC++DMY+RLGRVEEAFDVVKKM+FEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTE Y+SLLNMY+S GRWKDVS VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSH Q+AEMY LLE +LDEVK LGYEPV+YMEVIEEE  +E VFSSTIYHSE+LA+AFGLLNLP AT IR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVK+IT+CRDCHNFIRF+SLL GREIVIRDSKQLHKF NG CSC GFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

A0A6J1GH28 putative pentatricopeptide repeat-containing protein At5g526303.1e-13191.6Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFY+AEQLLKLRPKD ETY+SLLNMYISAGRWKDVS VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLM EEKLGKLKDWSWISIKEKVYSFKPNDKSH QT EMY+LLETLLDEVKPLGYEPVQY E IEEE G+ETVFSSTIYHSE+LA+AF LLNLP AT IR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVK+IT+CRDCHNFIRF+SLLTGREIVIRD KQLHKFSNGYCSCRGFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

A0A6J1KHZ4 putative pentatricopeptide repeat-containing protein At5g526305.3e-13190.8Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFE NE+IWSM+IAGCRSHGNSELGFYAA+QLLKLRPKDTETY+SLLNMYISAGRWKDVS VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLM EEKLGKLKDWSWI+IKEKVYSFKP DKSH QTAEMY+LLETLLDEVKPLGYEPVQYME+ EEEKG+ET FSSTIYHSE+LA+AFGLLNLP AT IR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVK+IT+CRDCHNFIRF+SLLTGREIVIRD KQLHKFSNGYCSCRGFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

A0A6J1KJZ5 pentatricopeptide repeat-containing protein At4g21065-like2.0e-13896.8Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        MQKQ +IEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTE+YISLLNMYISAGRWKDVSTVR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR
        KLMKEEK+GKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSE+LA+AFGLLNLPKATQIR
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIR

Query:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL
        VVKNIT+CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSC GFGDL
Subjt:  VVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDL

SwissProt top hitse value%identityAlignment
A8MQA3 Pentatricopeptide repeat-containing protein At4g210657.3e-5340Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M+++YKIEP ++HF CM+D+  R G+V++A++ +K M  +PN +IW  L+  C  HG+S+L  +A  Q+L+L P  +  Y+ L NMY S  RW DV  +R
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPV---QYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT
        K M  + + K+   S + +  +V+ F   DKSH Q+  +Y  L+ +   ++  GY P     Y++V EEEK      ++ +YHSE++AIAF L++ P+ +
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPV---QYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT

Query:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
         I VVKN+ +C DCH  I+ VS +  REIV+RD  + H F NG CSC+ +
Subjt:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF

Q0WSH6 Pentatricopeptide repeat-containing protein At4g148503.5e-5540.8Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M+  Y IEP  +H++C++DM  R G VE A++ +KKM  +P   +W  L   CR HG  +LG  AAE L KL PKD+  ++ L N + +AGRW + +TVR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP---VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT
        + +K   + K   +SWI++K +V++F+  D+SH    E+   L  L +E++  GY+P   +   ++ EEEK  E       +HSE+LA+AFGLL+LP + 
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP---VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT

Query:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
         IR+ KN+ +C DCH+F +FVS    REI++RD+ + H+F +G CSC+ +
Subjt:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF

Q5G1T1 Pentatricopeptide repeat-containing protein At3g49170, chloroplastic4.3e-5338.15Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M + +KI+P M+H+ACM+D+  R G + +AF+ +  M F+ + ++W   +  CR H N+ELG  AA ++L+L P +   YI L N+Y  AG+W++ + +R
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIY-HSERLAIAFGLLNLPKATQ
        + MKE  L K    SWI + +K++ F   D +H    ++Y  L+ L+ E+K  GY P   + + + EE+ DE      +Y HSE++A+AFGL++  K+  
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIY-HSERLAIAFGLLNLPKATQ

Query:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
        +RV KN+ +C DCHN ++++S ++GREIV+RD  + H F +G CSC  +
Subjt:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF

Q9M4P3 Pentatricopeptide repeat-containing protein At4g16835, mitochondrial6.0e-5540.24Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M + YK+EP  DH+ CM+D+  R G++EEA  +++ M F P+  ++  L+  CR H N EL  +AAE+LL+L  ++   Y+ L N+Y S  RW+DV+ VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP-VQY-MEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQ
        K MKE  + K+  +SWI I+ KV+ F+ +D+ H +   ++K L+ L  ++K  GY+P +++ +  +EEE+ ++ +    ++HSE+LA+AFG + LP+ +Q
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP-VQY-MEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQ

Query:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSC
        I+V KN+ +C DCH  I+F+S +  REI++RD+ + H F +G CSC
Subjt:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSC

Q9SHZ8 Pentatricopeptide repeat-containing protein At2g220701.1e-5640.16Show/hide
Query:  KIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVRKLMKE
        KI P + H+ACM+D++ R G ++EA + ++KM  EP+ + W  L++ CR H N +LG  AAE+LL L P+++  Y +L N+Y + G+W++ + +RK MK+
Subjt:  KIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVRKLMKE

Query:  EKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP--VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIRVVK
         ++ K + +SWI +K KV+ F   D +H +  E+Y  ++ + DE+K +GY P     +  +EEE  ++ +     +HSE+LAIAFGL++ P  T +R++K
Subjt:  EKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP--VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIRVVK

Query:  NITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
        N+ +C DCH  I+F+S L GREI++RD+ + H F +G+CSCR +
Subjt:  NITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF

Arabidopsis top hitse value%identityAlignment
AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein7.7e-5840.16Show/hide
Query:  KIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVRKLMKE
        KI P + H+ACM+D++ R G ++EA + ++KM  EP+ + W  L++ CR H N +LG  AAE+LL L P+++  Y +L N+Y + G+W++ + +RK MK+
Subjt:  KIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVRKLMKE

Query:  EKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP--VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIRVVK
         ++ K + +SWI +K KV+ F   D +H +  E+Y  ++ + DE+K +GY P     +  +EEE  ++ +     +HSE+LAIAFGL++ P  T +R++K
Subjt:  EKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP--VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIRVVK

Query:  NITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
        N+ +C DCH  I+F+S L GREI++RD+ + H F +G+CSCR +
Subjt:  NITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF

AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.0e-5438.15Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M + +KI+P M+H+ACM+D+  R G + +AF+ +  M F+ + ++W   +  CR H N+ELG  AA ++L+L P +   YI L N+Y  AG+W++ + +R
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIY-HSERLAIAFGLLNLPKATQ
        + MKE  L K    SWI + +K++ F   D +H    ++Y  L+ L+ E+K  GY P   + + + EE+ DE      +Y HSE++A+AFGL++  K+  
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIY-HSERLAIAFGLLNLPKATQ

Query:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
        +RV KN+ +C DCHN ++++S ++GREIV+RD  + H F +G CSC  +
Subjt:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF

AT4G14850.1 Pentatricopeptide repeat (PPR) superfamily protein2.5e-5640.8Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M+  Y IEP  +H++C++DM  R G VE A++ +KKM  +P   +W  L   CR HG  +LG  AAE L KL PKD+  ++ L N + +AGRW + +TVR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP---VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT
        + +K   + K   +SWI++K +V++F+  D+SH    E+   L  L +E++  GY+P   +   ++ EEEK  E       +HSE+LA+AFGLL+LP + 
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP---VQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT

Query:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
         IR+ KN+ +C DCH+F +FVS    REI++RD+ + H+F +G CSC+ +
Subjt:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF

AT4G16835.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.2e-5640.24Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M + YK+EP  DH+ CM+D+  R G++EEA  +++ M F P+  ++  L+  CR H N EL  +AAE+LL+L  ++   Y+ L N+Y S  RW+DV+ VR
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP-VQY-MEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQ
        K MKE  + K+  +SWI I+ KV+ F+ +D+ H +   ++K L+ L  ++K  GY+P +++ +  +EEE+ ++ +    ++HSE+LA+AFG + LP+ +Q
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEP-VQY-MEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQ

Query:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSC
        I+V KN+ +C DCH  I+F+S +  REI++RD+ + H F +G CSC
Subjt:  IRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSC

AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.2e-5440Show/hide
Query:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR
        M+++YKIEP ++HF CM+D+  R G+V++A++ +K M  +PN +IW  L+  C  HG+S+L  +A  Q+L+L P  +  Y+ L NMY S  RW DV  +R
Subjt:  MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVR

Query:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPV---QYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT
        K M  + + K+   S + +  +V+ F   DKSH Q+  +Y  L+ +   ++  GY P     Y++V EEEK      ++ +YHSE++AIAF L++ P+ +
Subjt:  KLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPV---QYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKAT

Query:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF
         I VVKN+ +C DCH  I+ VS +  REIV+RD  + H F NG CSC+ +
Subjt:  QIRVVKNITLCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGCAGTACAAGATTGAGCCTGTAATGGACCATTTTGCATGCATGATTGACATGTATATGAGGTTGGGTCGGGTGGAAGAAGCTTTTGATGTAGTCAAGAAGAT
GAACTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCAGGATGTCGAAGTCATGGGAACTCCGAATTGGGGTTTTATGCTGCTGAGCAGTTACTCAAACTCAGGC
CGAAAGACACCGAGACCTACATCTCTCTGCTAAATATGTACATCTCTGCAGGGAGATGGAAGGATGTTTCCACAGTGAGGAAATTAATGAAAGAAGAAAAGCTTGGAAAG
TTGAAGGACTGGAGCTGGATTAGCATCAAAGAAAAAGTTTATTCATTTAAACCCAATGACAAATCACACTGTCAAACTGCAGAGATGTACAAGCTGTTGGAGACTTTACT
CGACGAAGTAAAACCTCTTGGTTACGAACCTGTTCAATATATGGAGGTAATCGAAGAGGAGAAAGGCGATGAAACAGTGTTCTCGTCCACCATTTATCACAGCGAGAGGT
TAGCCATTGCTTTTGGCTTGTTAAACCTGCCAAAAGCCACCCAGATTCGGGTTGTCAAGAACATCACCCTGTGTAGGGACTGCCATAATTTTATCCGATTCGTATCATTA
TTGACAGGCAGGGAAATCGTCATCCGAGATAGCAAGCAGCTTCACAAGTTTTCAAACGGATACTGTTCTTGTAGAGGTTTTGGAGATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGCAGTACAAGATTGAGCCTGTAATGGACCATTTTGCATGCATGATTGACATGTATATGAGGTTGGGTCGGGTGGAAGAAGCTTTTGATGTAGTCAAGAAGAT
GAACTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCAGGATGTCGAAGTCATGGGAACTCCGAATTGGGGTTTTATGCTGCTGAGCAGTTACTCAAACTCAGGC
CGAAAGACACCGAGACCTACATCTCTCTGCTAAATATGTACATCTCTGCAGGGAGATGGAAGGATGTTTCCACAGTGAGGAAATTAATGAAAGAAGAAAAGCTTGGAAAG
TTGAAGGACTGGAGCTGGATTAGCATCAAAGAAAAAGTTTATTCATTTAAACCCAATGACAAATCACACTGTCAAACTGCAGAGATGTACAAGCTGTTGGAGACTTTACT
CGACGAAGTAAAACCTCTTGGTTACGAACCTGTTCAATATATGGAGGTAATCGAAGAGGAGAAAGGCGATGAAACAGTGTTCTCGTCCACCATTTATCACAGCGAGAGGT
TAGCCATTGCTTTTGGCTTGTTAAACCTGCCAAAAGCCACCCAGATTCGGGTTGTCAAGAACATCACCCTGTGTAGGGACTGCCATAATTTTATCCGATTCGTATCATTA
TTGACAGGCAGGGAAATCGTCATCCGAGATAGCAAGCAGCTTCACAAGTTTTCAAACGGATACTGTTCTTGTAGAGGTTTTGGAGATCTTTAG
Protein sequenceShow/hide protein sequence
MQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMYISAGRWKDVSTVRKLMKEEKLGK
LKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSERLAIAFGLLNLPKATQIRVVKNITLCRDCHNFIRFVSL
LTGREIVIRDSKQLHKFSNGYCSCRGFGDL