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Carg22534 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22534
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:2769911..2772095
RNA-Seq ExpressionCarg22534
SyntenyCarg22534
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA0395685.1 unnamed protein product [Arabidopsis thaliana]6.5e-0661.22Show/hide
Query:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV
        P ILSWK +TAK GT G PK  +A E REE+SK+ P  P ENTCQ+ AV
Subjt:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV

EXC50736.1 hypothetical protein L484_000382 [Morus notabilis]1.0e-0661.82Show/hide
Query:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV
        MA  L+PSILSWKK+TAKTGT GK K  M LEK E+TS+M PT P   +C  +AV
Subjt:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV

KAG7012523.1 hypothetical protein SDJN02_25275, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-39100Show/hide
Query:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKPASSRLVK
        MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKPASSRLVK
Subjt:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKPASSRLVK

NP_001329273.1 hypothetical protein AT4G18215, partial [Arabidopsis thaliana]9.4e-0562.22Show/hide
Query:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQ
        P ILSWK +TAK GT G PK  +A E REE+SK+ P  P ENTCQ
Subjt:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQ

RXH99001.1 hypothetical protein DVH24_011326 [Malus domestica]9.4e-0542.5Show/hide
Query:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKP
        +A   +PS+LS KK+TA+TG  GKP+A M LE +E+TS + P          MA     + VR++ +PYPA+A TV   P
Subjt:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKP

TrEMBL top hitse value%identityAlignment
A0A1P8B771 Uncharacterized protein (Fragment)4.6e-0562.22Show/hide
Query:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQ
        P ILSWK +TAK GT G PK  +A E REE+SK+ P  P ENTCQ
Subjt:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQ

A0A498K0X3 Uncharacterized protein4.6e-0542.5Show/hide
Query:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKP
        +A   +PS+LS KK+TA+TG  GKP+A M LE +E+TS + P          MA     + VR++ +PYPA+A TV   P
Subjt:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKP

A0A654FQX5 Uncharacterized protein3.2e-0661.22Show/hide
Query:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV
        P ILSWK +TAK GT G PK  +A E REE+SK+ P  P ENTCQ+ AV
Subjt:  PSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV

W9SMF6 Uncharacterized protein4.9e-0761.82Show/hide
Query:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV
        MA  L+PSILSWKK+TAKTGT GK K  M LEK E+TS+M PT P   +C  +AV
Subjt:  MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAATTTTGATGCCATCCATATTGTCATGGAAGAAAATGACAGCGAAAACAGGAACAATGGGCAAACCCAAAGCACCAATGGCATTGGAAAAGAGAGAAGAGAC
GTCAAAAATGAGACCCACAGAGCCAACGGAGAACACTTGCCAGCTTATGGCTGTCCAAAACAATGCTAGTTGGGTTAGGGATAGCACTAGGCCATACCCGGCTGAGGCCG
CTACCGTGCACACGAAACCTGCTTCTTCTAGGTTGGTCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAATTTTGATGCCATCCATATTGTCATGGAAGAAAATGACAGCGAAAACAGGAACAATGGGCAAACCCAAAGCACCAATGGCATTGGAAAAGAGAGAAGAGAC
GTCAAAAATGAGACCCACAGAGCCAACGGAGAACACTTGCCAGCTTATGGCTGTCCAAAACAATGCTAGTTGGGTTAGGGATAGCACTAGGCCATACCCGGCTGAGGCCG
CTACCGTGCACACGAAACCTGCTTCTTCTAGGTTGGTCAAG
Protein sequenceShow/hide protein sequence
MATILMPSILSWKKMTAKTGTMGKPKAPMALEKREETSKMRPTEPTENTCQLMAVQNNASWVRDSTRPYPAEAATVHTKPASSRLVK