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Carg22537 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22537
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description(thale cress) hypothetical protein
Genome locationCarg_Chr18:2799577..2803926
RNA-Seq ExpressionCarg22537
SyntenyCarg22537
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573362.1 hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sororia]7.1e-6899.26Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
        MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIH GGRESLGKAIEHLNTIEAWDNKPSDVKR
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR

Query:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR
        ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR
Subjt:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR

KAG7012526.1 hypothetical protein SDJN02_25278 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-68100Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
        MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR

Query:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR
        ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR
Subjt:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR

XP_022955331.1 uncharacterized protein LOC111457324 [Cucurbita moschata]9.6e-5785.93Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
        MQSLLCLPLDAAAEGETKDISANKR+AL+ALLANNPS AE IMK VLQTYE  NMQTKY+A LA V ILIH GGRESLG AI HLN IE WDNKPSDVKR
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR

Query:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR
        ILYRAVIYTLL+ D+EAKTNWKTFSDQIGKGPKPR
Subjt:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR

XP_022994895.1 uncharacterized protein LOC111490483 [Cucurbita maxima]1.6e-4371.97Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
        MQSLLC  LDAAAE ETKDISA KR+AL+ALLANNP+ AE IMKKVLQ Y+N  ++ KY+ATLAMVAILIH G R+SL  A+ +LN IEAW  KPSD+KR
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR

Query:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP
        ILYRAVIYTLLE   +AK NWK FSD IG GP
Subjt:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP

XP_023542455.1 uncharacterized protein LOC111802357 [Cucurbita pepo subsp. pepo]3.8e-5382.71Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
        MQSLLCLPLDAAAEGETKDISANKR+AL+ LLANNPS AE IMKK+LQ YEN NMQTKY+ATLAMVAILIH GG ESL  AI +LN +EAW+NKPSD KR
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR

Query:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPK
        ILYRAVIYTLLE   +AKTNWKTFSDQIGKGPK
Subjt:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPK

TrEMBL top hitse value%identityAlignment
A0A0A0LXK7 Uncharacterized protein2.2e-1438.35Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTY-ENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVK
        ++SLLC    +     T  ++  KR+AL ALL  NP  AE I+K V   Y  N N Q +Y+A +A++ ILIHMG  ESL  A++  + I   + +PSD  
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTY-ENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVK

Query:  RILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP
          LY AVI TL+  +     +WK + + I   P
Subjt:  RILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP

A0A1S3BA19 uncharacterized protein LOC1034876761.6e-0938.41Show/hide
Query:  MQSLLCL-PLDAAAEGETKDISANKREALRALLANNPS----RAENIMKKVLQTYENG-NMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNK
        +QSLLC  P D   + +T  I+  K  AL+ALL   P+    RA  IM KV + Y N  N   +Y+A +A + ILIH+G  +S  +A E L  +E    +
Subjt:  MQSLLCL-PLDAAAEGETKDISANKREALRALLANNPS----RAENIMKKVLQTYENG-NMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNK

Query:  PSDVKRILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP
        PSD    LY+AVI TLL R    K +W  +++     P
Subjt:  PSDVKRILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP

A0A6J1CHE7 uncharacterized protein LOC1110109061.1e-1843.88Show/hide
Query:  MQSLLCLPLD----AAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAW---DN
        +++LLC  +     AA       I+  K+EAL+ L+A N   AENIM +V + Y+  N QT+YDA LA+V  LIH G  ES  KA+ HLN +E     +N
Subjt:  MQSLLCLPLD----AAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAW---DN

Query:  KPSDVKRILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP
         PSD K  LY A++ TLL+ D EAK +W  ++  IG GP
Subjt:  KPSDVKRILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP

A0A6J1GTH1 uncharacterized protein LOC1114573244.7e-5785.93Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
        MQSLLCLPLDAAAEGETKDISANKR+AL+ALLANNPS AE IMK VLQTYE  NMQTKY+A LA V ILIH GGRESLG AI HLN IE WDNKPSDVKR
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR

Query:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR
        ILYRAVIYTLL+ D+EAKTNWKTFSDQIGKGPKPR
Subjt:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR

A0A6J1K2L3 uncharacterized protein LOC1114904837.7e-4471.97Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR
        MQSLLC  LDAAAE ETKDISA KR+AL+ALLANNP+ AE IMKKVLQ Y+N  ++ KY+ATLAMVAILIH G R+SL  A+ +LN IEAW  KPSD+KR
Subjt:  MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKR

Query:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP
        ILYRAVIYTLLE   +AK NWK FSD IG GP
Subjt:  ILYRAVIYTLLERDTEAKTNWKTFSDQIGKGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34540.2 unknown protein1.2e-0933.62Show/hide
Query:  DISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKRILYRAVIYTLLERDTEAK
        DI + K EA+R +       A  +++     Y N   +  ++  +A+V ILI +   E   +A E+ + +   + + SDV+  LY+A+IYT+L++DTEAK
Subjt:  DISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKRILYRAVIYTLLERDTEAK

Query:  TNWKTFSDQIGKGPKP
          WK F   IG+G  P
Subjt:  TNWKTFSDQIGKGPKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGCTGCTGTGCCTCCCTTTGGATGCGGCGGCGGAGGGTGAAACCAAAGACATAAGTGCAAACAAGAGAGAAGCTTTACGGGCATTGTTGGCTAATAATCCTTC
ACGGGCTGAGAATATAATGAAGAAGGTGCTTCAAACATACGAAAATGGCAATATGCAGACTAAATATGATGCTACCTTGGCAATGGTTGCAATTCTCATCCACATGGGAG
GAAGAGAAAGCTTGGGTAAAGCTATTGAGCATCTGAACACCATAGAAGCGTGGGACAATAAGCCAAGTGATGTAAAGCGTATCCTTTATCGGGCTGTTATTTATACCTTA
TTGGAGCGCGATACTGAGGCTAAAACTAATTGGAAAACTTTCTCAGACCAAATAGGCAAGGGCCCAAAACCGAGGTGA
mRNA sequenceShow/hide mRNA sequence
AACGTGTCTTCTTCCGTTCACCTCGTCCCTAACAAGACCGTTAACAAGCACGACGCTCGGAGGTGTACTAATAATGGCATCAAAATAGTGTGTCACGTATTTAACCCAAA
GGAGCCGTCCAGTTCTCATAACAATGGCTTTCCTTTATTAGACACCAAAGTGGCTATGCAGTCGCTGCTGTGCCTCCCTTTGGATGCGGCGGCGGAGGGTGAAACCAAAG
ACATAAGTGCAAACAAGAGAGAAGCTTTACGGGCATTGTTGGCTAATAATCCTTCACGGGCTGAGAATATAATGAAGAAGGTGCTTCAAACATACGAAAATGGCAATATG
CAGACTAAATATGATGCTACCTTGGCAATGGTTGCAATTCTCATCCACATGGGAGGAAGAGAAAGCTTGGGTAAAGCTATTGAGCATCTGAACACCATAGAAGCGTGGGA
CAATAAGCCAAGTGATGTAAAGCGTATCCTTTATCGGGCTGTTATTTATACCTTATTGGAGCGCGATACTGAGGCTAAAACTAATTGGAAAACTTTCTCAGACCAAATAG
GCAAGGGCCCAAAACCGAGGTGATAACATATATATATATAT
Protein sequenceShow/hide protein sequence
MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYDATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKRILYRAVIYTL
LERDTEAKTNWKTFSDQIGKGPKPR