; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22544 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22544
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:2850891..2853494
RNA-Seq ExpressionCarg22544
SyntenyCarg22544
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012533.1 hypothetical protein SDJN02_25285, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-67100Show/hide
Query:  MIKSEGISSRMATAETDSTCTDFSFGIVHWYSFFSPINVRPPPNSPLQGPTSLLAHCLVSTPLELTSSLTHHLMSSSDTICSGDEIEVEHVDVGDDIPAV
        MIKSEGISSRMATAETDSTCTDFSFGIVHWYSFFSPINVRPPPNSPLQGPTSLLAHCLVSTPLELTSSLTHHLMSSSDTICSGDEIEVEHVDVGDDIPAV
Subjt:  MIKSEGISSRMATAETDSTCTDFSFGIVHWYSFFSPINVRPPPNSPLQGPTSLLAHCLVSTPLELTSSLTHHLMSSSDTICSGDEIEVEHVDVGDDIPAV

Query:  KSPISARNTLPEEDEEAANTVTELDFFSFPP
        KSPISARNTLPEEDEEAANTVTELDFFSFPP
Subjt:  KSPISARNTLPEEDEEAANTVTELDFFSFPP
KAG7028243.1 hypothetical protein SDJN02_09424, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-0561.54Show/hide
Query:  WYSFFSPINVRPPPNSPLQGPTSLLAHCLVSTPL-ELTSSLTHHLMSSSDTI
        W+SF  PI+V PPPNSP  GP SLLAH LV TPL   T  L H  +S SDTI
Subjt:  WYSFFSPINVRPPPNSPLQGPTSLLAHCLVSTPL-ELTSSLTHHLMSSSDTI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAGTCTGAGGGTATTAGCAGTAGAATGGCCACTGCAGAAACTGATTCTACATGCACCGACTTCTCATTCGGAATCGTCCACTGGTACTCGTTTTTTTCTCCCAT
CAATGTAAGGCCCCCACCAAATTCACCCCTTCAGGGCCCAACGTCCTTGTTGGCACACTGCCTCGTATCCACCCCTTTGGAGCTCACCTCCTCGCTGACACATCATCTAA
TGTCTAGCTCTGATACCATTTGTAGTGGCGATGAAATCGAAGTGGAGCATGTGGATGTGGGCGATGATATTCCTGCAGTTAAATCGCCAATCTCTGCGAGGAACACACTG
CCTGAAGAAGACGAAGAAGCAGCGAATACTGTAACGGAGCTCGATTTCTTCTCCTTTCCCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAAGTCTGAGGGTATTAGCAGTAGAATGGCCACTGCAGAAACTGATTCTACATGCACCGACTTCTCATTCGGAATCGTCCACTGGTACTCGTTTTTTTCTCCCAT
CAATGTAAGGCCCCCACCAAATTCACCCCTTCAGGGCCCAACGTCCTTGTTGGCACACTGCCTCGTATCCACCCCTTTGGAGCTCACCTCCTCGCTGACACATCATCTAA
TGTCTAGCTCTGATACCATTTGTAGTGGCGATGAAATCGAAGTGGAGCATGTGGATGTGGGCGATGATATTCCTGCAGTTAAATCGCCAATCTCTGCGAGGAACACACTG
CCTGAAGAAGACGAAGAAGCAGCGAATACTGTAACGGAGCTCGATTTCTTCTCCTTTCCCCCTTGA
Protein sequenceShow/hide protein sequence
MIKSEGISSRMATAETDSTCTDFSFGIVHWYSFFSPINVRPPPNSPLQGPTSLLAHCLVSTPLELTSSLTHHLMSSSDTICSGDEIEVEHVDVGDDIPAVKSPISARNTL
PEEDEEAANTVTELDFFSFPP