; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22558 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22558
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription termination factor MTEF1, chloroplastic-like
Genome locationCarg_Chr18:2939997..2940896
RNA-Seq ExpressionCarg22558
SyntenyCarg22558
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0032502 - developmental process (biological process)
GO:0071472 - cellular response to salt stress (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0042646 - plastid nucleoid (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573378.1 Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.5e-16098.35Show/hide
Query:  MPATPFHSSLCF----SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQ
        MPATPFHSSLC     SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQ
Subjt:  MPATPFHSSLCF----SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQ

Query:  SKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLI
        SKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLI
Subjt:  SKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLI

Query:  PKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR
        PKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR
Subjt:  PKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR

Query:  EGA
        EGA
Subjt:  EGA

KAG7012547.1 Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-163100Show/hide
Query:  MPATPFHSSLCFSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGI
        MPATPFHSSLCFSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGI
Subjt:  MPATPFHSSLCFSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGI

Query:  HQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLR
        HQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLR
Subjt:  HQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLR

Query:  YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREGA
        YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREGA
Subjt:  YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREGA

XP_022954670.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita moschata]7.1e-16199Show/hide
Query:  MPATPFHSSLCF--SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
        MPATPFHSSLCF  SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
Subjt:  MPATPFHSSLCF--SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK

Query:  GIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
        GIHQKDFAKIFGMCPK+LTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
Subjt:  GIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK

Query:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
Subjt:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

Query:  A
        A
Subjt:  A

XP_022994850.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita maxima]6.5e-15496.69Show/hide
Query:  MPATPFHSSLCFSSS---SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
        MPATPFHSSLCFSSS   SSSSSPSNSHQPNPFLS KPTT LFHKH  PLLHSTLSSQ KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
Subjt:  MPATPFHSSLCFSSS---SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS

Query:  KGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
        KGIHQKDFAKIFGMCPK+LTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
Subjt:  KGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP

Query:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        KL+YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
Subjt:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Query:  GA
        GA
Subjt:  GA

XP_023541269.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp. pepo]2.0e-15596.41Show/hide
Query:  MPATPFHSSLCF------SSSSSSSSPSNSHQPNP-FLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVIS
        MPATPFHSSLCF      SSSSSSSSPSNSHQPNP FLS KPTT LFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVIS
Subjt:  MPATPFHSSLCF------SSSSSSSSPSNSHQPNP-FLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVIS

Query:  FLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEK
        FLQSKGIHQKDFAKIFGMCPK+LTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEK
Subjt:  FLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEK

Query:  TLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRE
        TLIPKL YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRE
Subjt:  TLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRE

Query:  LLREGA
        LLREGA
Subjt:  LLREGA

TrEMBL top hitse value%identityAlignment
A0A0A0LVD4 Uncharacterized protein4.4e-13284.9Show/hide
Query:  ATPFHSSLCFSSSSS-SSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGI
        AT FHSS CFSS +  SSSPSNSHQPN  LSPKP TLL HKHP    LHST+SSQTKEKILCLE+MGVD+GKALS NPSLHS TL+SIHSVISFLQSKGI
Subjt:  ATPFHSSLCFSSSSS-SSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGI

Query:  HQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLR
        HQKDFAKIFGMCPK+LTSDVKTDL+PVF FLSEDLK+PDQNFR+AINKCPRLLASSA+DQLKP LFYLQRLGLKDLEALAYHD VLLVSSVEKTLIPKL+
Subjt:  HQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLR

Query:  YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        YL SLGF++S IVGMVLRCPALLTFSIENNFKPKFEYFS EMH+KLEEL+ FPQYF+FSLEKRIKPRYVET +SGK V LSLMLK+TD EFRELL EG
Subjt:  YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

A0A5D3DB89 Transcription termination factor MTEF13.7e-13184.9Show/hide
Query:  ATPFHSSLCFSSSSS-SSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGI
        AT FHSS CFSS +  SSSPSNSHQPN  LSPKP TLL HKHP    LHSTLSSQTKEKILCLE+MGVD+GKALS NPSLH  TL+SIHSVISFLQSKGI
Subjt:  ATPFHSSLCFSSSSS-SSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGI

Query:  HQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLR
        HQKDFAKIFGMCPK+LTSDVKTDLIPVF FLSEDLK+PDQNFR+AINKCPRLLASSA+DQLKP LFYLQRLGLKDLEALAYHD VLLVSSVEKTLIPKL+
Subjt:  HQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLR

Query:  YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        YL SLGF++S  VGMVLRCPALLTFSIENNFKPKFEYFS EMHRKLEEL+ FPQYF+FSLEKRIKPR+VET +SGK V LSLMLK+TD EFRELL EG
Subjt:  YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

A0A6J1CE81 transcription termination factor MTEF1, chloroplastic1.2e-13284.72Show/hide
Query:  ATPFHSSLCFSSSSSSSSP----SNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
        AT FHSS CFSS   SSSP    SNSHQPN  L+ KP T LFHKHP    LHSTLSSQ KEKILCLE+MGVDAGKALSLNPSLHS TL+SIHSVISFLQS
Subjt:  ATPFHSSLCFSSSSSSSSP----SNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS

Query:  KGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
        KGIHQKDFAKIFGMCPK+LTSDVKTDLIPVF FLSEDLK+PDQ+FRR INKCPRLLASSAKDQLKP LFYLQRLGL+DLEALAYHD VLLVSSVE+TLIP
Subjt:  KGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP

Query:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        KL+YL SLGFS+S  VGMVLRCPALLTFSIENNFKPKFEYFSGEMH KLEEL+ FPQYF+FSLEKRIKPRY+ET QSGK V LSLMLK+TDDEFRELLRE
Subjt:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Query:  G
        G
Subjt:  G

A0A6J1GT19 transcription termination factor MTEF1, chloroplastic-like3.4e-16199Show/hide
Query:  MPATPFHSSLCF--SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
        MPATPFHSSLCF  SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
Subjt:  MPATPFHSSLCF--SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK

Query:  GIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
        GIHQKDFAKIFGMCPK+LTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
Subjt:  GIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK

Query:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
Subjt:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

Query:  A
        A
Subjt:  A

A0A6J1K2G9 transcription termination factor MTEF1, chloroplastic-like3.1e-15496.69Show/hide
Query:  MPATPFHSSLCFSSS---SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
        MPATPFHSSLCFSSS   SSSSSPSNSHQPNPFLS KPTT LFHKH  PLLHSTLSSQ KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
Subjt:  MPATPFHSSLCFSSS---SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS

Query:  KGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
        KGIHQKDFAKIFGMCPK+LTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
Subjt:  KGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP

Query:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        KL+YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
Subjt:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Query:  GA
        GA
Subjt:  GA

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic6.1e-2229.84Show/hide
Query:  KEKILCLEVMGV---DAGKALSLNPSLHSATLQS-IHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRL
        ++KI  L+  G+   + G+ L+  P L   +++     ++ +    GI ++   +I  + P L   D++  + P   FL E + +P++     + K P L
Subjt:  KEKILCLEVMGV---DAGKALSLNPSLHSATLQS-IHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRL

Query:  LASSAKDQLKP-TLFYLQRLGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEEL
        L +S   +++P  +F L R G+  KD+  +   DP LL  S+   L P +RY  SLG     +  M+   P LL ++++ N +PK+ Y    M R L++L
Subjt:  LASSAKDQLKP-TLFYLQRLGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEEL

Query:  EGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
          FP++FS+SLE+RI PR+    ++  +  L  ML  TD+EF   +R+
Subjt:  EGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

F4JVI3 Transcription termination factor MTERF5, chloroplastic2.5e-2330.71Show/hide
Query:  EKILCLEVMGVDAGKALSLNPSLHSATL-QSIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS
        E +L L +   D    L   P +   +L  ++   ++FL++ GI +  +AKI    P +LT   +  L     FLS+   + ++   R + +CP +++ S
Subjt:  EKILCLEVMGVDAGKALSLNPSLHSATL-QSIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS

Query:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYF
         +D+L+PT+ Y + L + D+  L +  P     S+E  L P   +    GF    I  M+ R  AL TFS++ N  PK++YF   M     EL  FPQ+F
Subjt:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYF

Query:  SFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
         +SL++RIKPRY   ++SG  + L+ +L  +  EF +++++
Subjt:  SFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Q84X53 Transcription termination factor MTEF1, chloroplastic3.3e-5245.04Show/hide
Query:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS
        +EK++ L+ + VD  KAL +NPSL SA + S+ SV + L S G+ +    +I  M P LLTSD +++++PV  FLS ++ + +Q+  ++I++CPRLL SS
Subjt:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS

Query:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY
           QL+P L +L+ LG    + +   + VLLVS+VE+TLIPK+ YL   LGF++  +  MV+R PALLT+S++NN  PK E+F  EM   ++EL+ FPQY
Subjt:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY

Query:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        FSFSLE++IKPR+   ++ G  + LS MLK +D +F   L E
Subjt:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Q9FM80 Transcription termination factor MTERF9, chloroplastic9.1e-1825.11Show/hide
Query:  LFHKHPPPLLHSTLSSQTK-EKILCLEVMGVDAGKALSLNPSLHSATLQ-SIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLK
        ++ +H P L  +  S+Q + + +L + V   D  + L   P +   T++ ++ + ISFL   GI      +I    P L +  V+  L P   +L E++ 
Subjt:  LFHKHPPPLLHSTLSSQTK-EKILCLEVMGVDAGKALSLNPSLHSATLQ-SIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLK

Query:  VPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQR-LGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKP
        + + +  + +   P++L             +L + LG     +  +    P LL  S++   +P++ +L S+G   S I+ ++     +L+ S+E+N KP
Subjt:  VPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQR-LGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKP

Query:  KFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRY
        K+ Y   E++ ++  L  +P Y S SL++RI+PR+
Subjt:  KFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRY

Q9ZT96 Transcription termination factor MTERF4, chloroplastic2.1e-1425.08Show/hide
Query:  KPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGV---DAGKALSLNPSLHSATLQSIHSV-ISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFT
        K T   F +  P +LHS++       +  L+ + +   D  + L   P +    L+   S  +++L   G+ +++   I    P++L   V   + P+  
Subjt:  KPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGV---DAGKALSLNPSLHSATLQSIHSV-ISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFT

Query:  FLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQ---------------------------------------RLGLKDLEALAYHDPVLLVSS
        +L E L +P     R I K P +L     D +KP +  LQ                                        L  +DL +L    P   VS 
Subjt:  FLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQ---------------------------------------RLGLKDLEALAYHDPVLLVSS

Query:  VEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDE
         E  ++  + +L   GFS      MV+ CP +L  ++    K  FEYF  EM R L++L  FP +F++ LE  +KPR+ +  + G   SL+ ML  +D++
Subjt:  VEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDE

Query:  FRE
        F +
Subjt:  FRE

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein2.4e-5345.04Show/hide
Query:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS
        +EK++ L+ + VD  KAL +NPSL SA + S+ SV + L S G+ +    +I  M P LLTSD +++++PV  FLS ++ + +Q+  ++I++CPRLL SS
Subjt:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS

Query:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY
           QL+P L +L+ LG    + +   + VLLVS+VE+TLIPK+ YL   LGF++  +  MV+R PALLT+S++NN  PK E+F  EM   ++EL+ FPQY
Subjt:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY

Query:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        FSFSLE++IKPR+   ++ G  + LS MLK +D +F   L E
Subjt:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

AT2G34620.1 Mitochondrial transcription termination factor family protein4.5e-9764.26Show/hide
Query:  SSLCFSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLL---HSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKD
        SS  + S    S P  S   + FLS KPTT+  + H  PL      T++ Q KEKILCLE+MG+D+GKALSLNP L SA L SI SV+ FLQSKGI+  D
Subjt:  SSLCFSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLL---HSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKD

Query:  FAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGS
          +I GMCPK+LTSDV+T+L PVF FLS DL VP+  FRR I KCPRLL SS +DQLKP LFYLQRLGLKDLEALAY DP+LLVSSVE TLIPKLR+L S
Subjt:  FAKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGS

Query:  LGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL
        +GFS+   +GM+LRCPAL TFSIENNFKPK +YF  E+  KLE L+ FPQYF+FSLEKRIKPR++E+ + G ++ LSLMLKSTD+EF +LL
Subjt:  LGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL

AT2G36000.1 Mitochondrial transcription termination factor family protein1.1e-4238.14Show/hide
Query:  SLCFSSSSSSSSPSNSHQPN-PFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKDF
        +L F  ++SSSS S    P+ P LS   TT             TL S   EK++ L+ +G+D    ++ +P L S  L ++ SV+ ++ +  I+   +DF
Subjt:  SLCFSSSSSSSSPSNSHQPN-PFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKDF

Query:  AKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGS
         ++  MCP+LLTS + +  IPV TFL  ++ V    + R+A+ + PRLLA S   QL+PTL++LQR+G+ D     Y    LL  SV+  L+P++ Y   
Subjt:  AKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGS

Query:  LGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL
        LGFS+ +   M  R P L  +SI  N++PK +Y   EM R + E+  FPQYFSFSLE RIKPR+      G    L +MLK+ +  FR+ L
Subjt:  LGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL

AT2G36000.2 Mitochondrial transcription termination factor family protein1.1e-4238.14Show/hide
Query:  SLCFSSSSSSSSPSNSHQPN-PFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKDF
        +L F  ++SSSS S    P+ P LS   TT             TL S   EK++ L+ +G+D    ++ +P L S  L ++ SV+ ++ +  I+   +DF
Subjt:  SLCFSSSSSSSSPSNSHQPN-PFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKDF

Query:  AKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGS
         ++  MCP+LLTS + +  IPV TFL  ++ V    + R+A+ + PRLLA S   QL+PTL++LQR+G+ D     Y    LL  SV+  L+P++ Y   
Subjt:  AKIFGMCPKLLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGS

Query:  LGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL
        LGFS+ +   M  R P L  +SI  N++PK +Y   EM R + E+  FPQYFSFSLE RIKPR+      G    L +MLK+ +  FR+ L
Subjt:  LGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL

AT3G18870.1 Mitochondrial transcription termination factor family protein2.1e-3336.4Show/hide
Query:  SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSL--HSATLQSIHSVISFLQSKGIHQKDFAKIFG
        SS SS  SPS+S         KP  L F             +  +E +  L  +G+     +  NP L   +  L  I S ++ L+SKGI  +DF ++  
Subjt:  SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSL--HSATLQSIHSVISFLQSKGIHQKDFAKIFG

Query:  MCPKLL--TSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFS
        +CP+L   T D+ + L PVF FL+ +L    +  R  I  CP +L S  +  L+PTL YL+ LG+++L   +  +  +L + VEK L  K+R+L S+GF 
Subjt:  MCPKLL--TSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFS

Query:  KSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEF
              +  R PA+  +S+E+N +PKFE+   +M R+LEEL+ FPQYF+FSL KRI+PR+   ++    VSLS ML   D +F
Subjt:  KSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCAACTCCTTTCCACTCTTCTCTCTGCTTCTCTTCTTCTTCTTCTTCTTCTTCGCCCTCAAACTCACACCAACCAAACCCTTTCTTATCACCCAAACCCACAAC
CCTCCTCTTCCACAAGCATCCTCCTCCTCTTCTTCACTCCACTCTCTCTTCCCAAACCAAAGAAAAAATCCTCTGCCTCGAAGTCATGGGCGTCGACGCCGGCAAGGCCC
TCTCTCTCAACCCATCTCTCCACTCTGCAACTCTTCAATCCATTCACTCTGTCATCTCCTTCCTCCAATCCAAAGGCATTCACCAAAAGGACTTCGCCAAGATCTTTGGA
ATGTGTCCTAAACTCCTCACTTCTGATGTCAAAACTGATCTAATCCCAGTTTTCACCTTCCTCTCTGAAGATCTTAAAGTCCCAGATCAGAATTTCAGAAGGGCTATCAA
CAAATGCCCTAGGTTGCTTGCTTCCAGTGCCAAAGATCAGCTGAAACCTACTCTGTTTTACCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCCTTGGCTTACCATGATC
CTGTGTTGCTGGTTTCTAGTGTGGAGAAGACCTTGATTCCTAAGCTGAGATATTTGGGGAGTTTGGGGTTTTCTAAGAGTGCCATTGTGGGGATGGTTTTGAGATGTCCA
GCACTGCTTACTTTCAGCATTGAAAATAACTTCAAGCCGAAGTTTGAGTACTTTTCTGGTGAGATGCATAGAAAATTGGAGGAGCTTGAGGGTTTTCCTCAGTATTTTTC
GTTTAGCTTGGAGAAGAGGATAAAGCCTAGGTATGTGGAGACTGAGCAGAGTGGTAAGGATGTGTCTTTGTCACTTATGCTCAAATCCACAGATGATGAGTTTAGAGAGT
TGTTAAGAGAAGGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCAACTCCTTTCCACTCTTCTCTCTGCTTCTCTTCTTCTTCTTCTTCTTCTTCGCCCTCAAACTCACACCAACCAAACCCTTTCTTATCACCCAAACCCACAAC
CCTCCTCTTCCACAAGCATCCTCCTCCTCTTCTTCACTCCACTCTCTCTTCCCAAACCAAAGAAAAAATCCTCTGCCTCGAAGTCATGGGCGTCGACGCCGGCAAGGCCC
TCTCTCTCAACCCATCTCTCCACTCTGCAACTCTTCAATCCATTCACTCTGTCATCTCCTTCCTCCAATCCAAAGGCATTCACCAAAAGGACTTCGCCAAGATCTTTGGA
ATGTGTCCTAAACTCCTCACTTCTGATGTCAAAACTGATCTAATCCCAGTTTTCACCTTCCTCTCTGAAGATCTTAAAGTCCCAGATCAGAATTTCAGAAGGGCTATCAA
CAAATGCCCTAGGTTGCTTGCTTCCAGTGCCAAAGATCAGCTGAAACCTACTCTGTTTTACCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCCTTGGCTTACCATGATC
CTGTGTTGCTGGTTTCTAGTGTGGAGAAGACCTTGATTCCTAAGCTGAGATATTTGGGGAGTTTGGGGTTTTCTAAGAGTGCCATTGTGGGGATGGTTTTGAGATGTCCA
GCACTGCTTACTTTCAGCATTGAAAATAACTTCAAGCCGAAGTTTGAGTACTTTTCTGGTGAGATGCATAGAAAATTGGAGGAGCTTGAGGGTTTTCCTCAGTATTTTTC
GTTTAGCTTGGAGAAGAGGATAAAGCCTAGGTATGTGGAGACTGAGCAGAGTGGTAAGGATGTGTCTTTGTCACTTATGCTCAAATCCACAGATGATGAGTTTAGAGAGT
TGTTAAGAGAAGGGGCTTAG
Protein sequenceShow/hide protein sequence
MPATPFHSSLCFSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFG
MCPKLLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCP
ALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREGA