; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22577 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22577
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr18:3201696..3202148
RNA-Seq ExpressionCarg22577
SyntenyCarg22577
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573403.1 hypothetical protein SDJN03_27290, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5985.33Show/hide
Query:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
        MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
Subjt:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA

Query:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        LIVVSL                    FKKQ+SRSPSSLSASETASI+VSK
Subjt:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

KAG7012565.1 hypothetical protein SDJN02_25317, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-74100Show/hide
Query:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
        MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
Subjt:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA

Query:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
Subjt:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

XP_022954449.1 uncharacterized protein LOC111456713 [Cucurbita moschata]1.6e-7398.67Show/hide
Query:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
        MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSG GGDHIRGA
Subjt:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA

Query:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        LIVVSLVCGIIGFSLLIASAFIYFFKFKKQ+SRSPSSLSASETASIIVSK
Subjt:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

XP_022994105.1 uncharacterized protein LOC111489933 [Cucurbita maxima]4.6e-6893.33Show/hide
Query:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
        MAIPSQIAAFAAV C LAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGN+ +SS VELPKAVNTSLPSQWWNRSH NRSG GGDHIRGA
Subjt:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA

Query:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        LIVVSLVCGIIGFSLLIASAFIYFFKFKKQ+SRSPSSLSASETASI+VSK
Subjt:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

XP_038895122.1 uncharacterized protein LOC120083432 [Benincasa hispida]2.3e-5175.97Show/hide
Query:  AIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGE-----GGDH
        AIPSQI +FAAV+  LA I   G SNARDLRPSEHGLEYQNPGA  NSS  MQSFF+GNSWSSS+V LPKA+NTSLP QWWNRSH NRSG      GGDH
Subjt:  AIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGE-----GGDH

Query:  IRGALIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        IRGAL+V SLVCGIIG SLLIASAFIYFFKF+KQ SRS SSLS SET +II +K
Subjt:  IRGALIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

TrEMBL top hitse value%identityAlignment
A0A5D3C2L6 Uncharacterized protein1.6e-4570.59Show/hide
Query:  SQIAAFAAVYCFLAAIFFF--GCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSG---EGGDHIRG
        S I +FA +Y  LA I       SNARDLRPSEHGL+YQNP A  NSS  MQSFF+GNSWS+S+V LPKA+NTSLP QWWNRSH NRSG    GGDHIRG
Subjt:  SQIAAFAAVYCFLAAIFFF--GCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSG---EGGDHIRG

Query:  ALIVVSLVCGIIGFSLLIASAFIYFFKFKKQ--SSRSPSSLSASETASIIVSK
        AL+V SLVCGIIG SLL+ASAFIYFFKF+KQ  SS S SSLSASET +II +K
Subjt:  ALIVVSLVCGIIGFSLLIASAFIYFFKFKKQ--SSRSPSSLSASETASIIVSK

A0A6J1EH69 uncharacterized protein LOC1114342714.3e-5173.55Show/hide
Query:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGE-----GGD
        M I S+IAA AA+YC +A IF  G SNARDLRPSEHGLEYQNPGA  NSS +MQSFF+GNSWSSS+V LPKA+NTSLPSQWWNRSH +RSG      GGD
Subjt:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGE-----GGD

Query:  HIRGALIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        HIRGAL+V SLVCG+IG SLLIASAFIY FKF+KQ +RS SSLS SET +II +K
Subjt:  HIRGALIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

A0A6J1GT11 uncharacterized protein LOC1114567138.0e-7498.67Show/hide
Query:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
        MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSG GGDHIRGA
Subjt:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA

Query:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        LIVVSLVCGIIGFSLLIASAFIYFFKFKKQ+SRSPSSLSASETASIIVSK
Subjt:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

A0A6J1K0B3 uncharacterized protein LOC1114899332.2e-6893.33Show/hide
Query:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA
        MAIPSQIAAFAAV C LAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGN+ +SS VELPKAVNTSLPSQWWNRSH NRSG GGDHIRGA
Subjt:  MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGA

Query:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        LIVVSLVCGIIGFSLLIASAFIYFFKFKKQ+SRSPSSLSASETASI+VSK
Subjt:  LIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

A0A6J1KLE3 uncharacterized protein LOC1114952324.3e-5174.51Show/hide
Query:  IPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRS-----GEGGDHI
        I S+IAAFAA+YC LA IF  G SNARDLRPSEHGLEYQNPGA  NSS +MQSFF+GNSWSSS+V LPKA+NTSLPSQWWNRSH +RS     G  GDHI
Subjt:  IPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRS-----GEGGDHI

Query:  RGALIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK
        RGAL+V SLVCG+IG SLLIASAFIY FKF+KQ +RS SSLS SET +II +K
Subjt:  RGALIVVSLVCGIIGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein4.0e-0939.09Show/hide
Query:  NARDLRPSEHGLE-YQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGALIVV-SLVCGIIGFSLLIASAFIYF
        NAR+LRPS+HGLE Y  PG     SS M SFF G   S+    +    ++ LPS   +        +  D +   ++VV SLVCG+ G +L++ASA IYF
Subjt:  NARDLRPSEHGLE-YQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGALIVV-SLVCGIIGFSLLIASAFIYF

Query:  FKFKKQSSRS
          + K  + S
Subjt:  FKFKKQSSRS

AT4G21740.1 unknown protein1.0e-0935.56Show/hide
Query:  IFFFGCSNARDLRPSEHGLEYQ---NPGATGNSSSNMQSFFQGNSWSSSEVE-----LPK--AVNTSLPSQWWNRSHANRSGEGGDHI-RGALIVVSLVC
        + F G S A +LRPS+HGL+YQ    P  + +    M+SFF G+S SSS        LPK  A +      WW     + +G   DH+ R   +  S++C
Subjt:  IFFFGCSNARDLRPSEHGLEYQ---NPGATGNSSSNMQSFFQGNSWSSSEVE-----LPK--AVNTSLPSQWWNRSHANRSGEGGDHI-RGALIVVSLVC

Query:  GIIGFSLLIASAFIYFFKFKKQS-SRSPSSLSASE
        G+ G +LL+    IYFF+++K + S SP+   + E
Subjt:  GIIGFSLLIASAFIYFFKFKKQS-SRSPSSLSASE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCCCTCGCAGATTGCTGCATTCGCCGCCGTCTATTGCTTTCTCGCCGCCATTTTCTTCTTCGGATGCTCAAATGCGAGAGACCTGCGTCCATCGGAGCACGG
TTTGGAGTACCAAAACCCTGGCGCTACTGGAAACTCTTCATCGAATATGCAATCGTTCTTCCAAGGAAACTCCTGGTCCTCCTCCGAGGTCGAGCTTCCGAAGGCGGTGA
ACACGAGCCTGCCGTCGCAGTGGTGGAATCGCAGCCACGCTAACCGCTCTGGAGAAGGCGGAGATCACATTCGCGGCGCGTTGATTGTTGTGAGTTTGGTATGTGGAATT
ATAGGCTTTTCTTTACTGATTGCTTCTGCTTTTATTTACTTCTTCAAGTTCAAGAAGCAGAGTAGTAGATCGCCGTCCTCGCTCTCTGCCTCTGAAACTGCTAGCATTAT
TGTTAGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTCCCTCGCAGATTGCTGCATTCGCCGCCGTCTATTGCTTTCTCGCCGCCATTTTCTTCTTCGGATGCTCAAATGCGAGAGACCTGCGTCCATCGGAGCACGG
TTTGGAGTACCAAAACCCTGGCGCTACTGGAAACTCTTCATCGAATATGCAATCGTTCTTCCAAGGAAACTCCTGGTCCTCCTCCGAGGTCGAGCTTCCGAAGGCGGTGA
ACACGAGCCTGCCGTCGCAGTGGTGGAATCGCAGCCACGCTAACCGCTCTGGAGAAGGCGGAGATCACATTCGCGGCGCGTTGATTGTTGTGAGTTTGGTATGTGGAATT
ATAGGCTTTTCTTTACTGATTGCTTCTGCTTTTATTTACTTCTTCAAGTTCAAGAAGCAGAGTAGTAGATCGCCGTCCTCGCTCTCTGCCTCTGAAACTGCTAGCATTAT
TGTTAGCAAGTGA
Protein sequenceShow/hide protein sequence
MAIPSQIAAFAAVYCFLAAIFFFGCSNARDLRPSEHGLEYQNPGATGNSSSNMQSFFQGNSWSSSEVELPKAVNTSLPSQWWNRSHANRSGEGGDHIRGALIVVSLVCGI
IGFSLLIASAFIYFFKFKKQSSRSPSSLSASETASIIVSK