; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22594 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22594
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationCarg_Chr17:5232031..5232354
RNA-Seq ExpressionCarg22594
SyntenyCarg22594
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605540.1 Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia]5.0e-40100Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFG
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFG
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFG

XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]2.5e-3988.07Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_022140347.1 protein transport protein Sec61 subunit beta [Momordica charantia]3.8e-4089.72Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGV APRGSAAATAGLRRRRL ST  AG+ G+V  GSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARS AGV
Subjt:  ARSAAGV

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]2.7e-46100Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]9.1e-4292.52Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
        MARG SQSQS SSSTSRPGVVAPRGSAAATAGLRRRR GSTS A +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta1.2e-3988.07Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A5D3CTD4 Protein transport protein Sec61 subunit beta1.6e-3988.07Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1CGL0 Protein transport protein Sec61 subunit beta1.8e-4089.72Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGV APRGSAAATAGLRRRRL ST  AG+ G+V  GSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARS AGV
Subjt:  ARSAAGV

A0A6J1H102 Protein transport protein Sec61 subunit beta1.3e-46100Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

A0A6J1JZ65 Protein transport protein Sec61 subunit beta1.3e-46100Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta1.5e-0743.3Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGK
        MA   SQ+ +  +   R    AP G+A A   LRRR +  + G+GTT             + FYTDD PG K+SP VV+ +SL FI FVT LHV GK
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGK

P38389 Protein transport protein Sec61 subunit beta8.9e-1666.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TSGAG      GG+SGG  G+ML+FYTDDAPGLKISP VVL++S+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY

P60467 Protein transport protein Sec61 subunit beta8.3e-0639.18Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T  AG T      S+G G M RFYT+D+PGLK+ P  VLV+SL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA

P60468 Protein transport protein Sec61 subunit beta8.3e-0639.18Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T  AG T      S+G G M RFYT+D+PGLK+ P  VLV+SL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA

Q9CQS8 Protein transport protein Sec61 subunit beta8.3e-0639.18Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T  AG T      S+G G M RFYT+D+PGLK+ P  VLV+SL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRA

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein6.3e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TSGAG      GG+SGG  G+ML+FYTDDAPGLKISP VVL++S+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein6.3e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TSGAG      GG+SGG  G+ML+FYTDDAPGLKISP VVL++S+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein6.3e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TSGAG      GG+SGG  G+ML+FYTDDAPGLKISP VVL++S+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein6.3e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TSGAG      GG+SGG  G+ML+FYTDDAPGLKISP VVL++S+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGG--GNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLY

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein4.5e-3171.3Show/hide
Query:  MARGTSQSQ---SASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGK
        MARG+SQSQ   S  SST+RPG+ APRGSAAATAG+RRRRLG   G  + G  SG  SG  NMLRFYTDDAPGLKISPTVVL++SLCFIGFVT LHVFGK
Subjt:  MARGTSQSQ---SASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGK

Query:  LYRARSAA
        LY  +S +
Subjt:  LYRARSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGAGGCACGTCTCAATCCCAATCTGCATCATCCTCCACCTCCAGGCCTGGCGTTGTGGCTCCTCGCGGCTCCGCCGCGGCGACGGCTGGTCTTCGCCGTCGCCG
TCTCGGTTCCACTTCTGGTGCCGGCACTACTGGACTTGTTTCTGGCGGATCAAGTGGCGGCGGCAACATGCTGAGGTTCTACACTGACGATGCTCCTGGTTTGAAGATTT
CTCCGACCGTCGTCCTCGTTGTGAGCCTCTGCTTCATCGGCTTTGTCACCGGCCTCCACGTCTTCGGTAAGCTCTATCGCGCGCGATCCGCCGCGGGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGAGGCACGTCTCAATCCCAATCTGCATCATCCTCCACCTCCAGGCCTGGCGTTGTGGCTCCTCGCGGCTCCGCCGCGGCGACGGCTGGTCTTCGCCGTCGCCG
TCTCGGTTCCACTTCTGGTGCCGGCACTACTGGACTTGTTTCTGGCGGATCAAGTGGCGGCGGCAACATGCTGAGGTTCTACACTGACGATGCTCCTGGTTTGAAGATTT
CTCCGACCGTCGTCCTCGTTGTGAGCCTCTGCTTCATCGGCTTTGTCACCGGCCTCCACGTCTTCGGTAAGCTCTATCGCGCGCGATCCGCCGCGGGAGTTTAA
Protein sequenceShow/hide protein sequence
MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGGNMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV