CuGenDBv2

Gene ID	Carg22606
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DRBM domain-containing protein
Genome location	Carg_Chr17:5156740..5158365
RNA-Seq Expression	Carg22606
Synteny	Carg22606
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575356.1 hypothetical protein SDJN03_25995, partial [Cucurbita argyrosperma subsp. sororia]

8.3e-117

98.65

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Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

KAG7013891.1 hypothetical protein SDJN02_24060, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-123

100

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Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
        TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGMYSTLLTHR
        LVVVGTKTQQLAYSAVKEATGMYSTLLTHR
Subjt:  LVVVGTKTQQLAYSAVKEATGMYSTLLTHR

XP_022929885.1 uncharacterized protein LOC111436360 isoform X1 [Cucurbita moschata]

5.4e-116

98.2

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Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DAC LATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

XP_022929892.1 uncharacterized protein LOC111436360 isoform X3 [Cucurbita moschata]

5.4e-116

98.2

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Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DAC LATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

XP_023548859.1 uncharacterized protein LOC111807382 isoform X2 [Cucurbita pepo subsp. pepo]

5.4e-116

98.2

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Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DAC LATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

TrEMBL top hits

e value

%identity

Alignment

A0A6J1ENX1 uncharacterized protein LOC111436360 isoform X3

2.6e-116

98.2

Show/hide

Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DAC LATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

A0A6J1EPE2 uncharacterized protein LOC111436360 isoform X1

2.6e-116

98.2

Show/hide

Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DAC LATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

A0A6J1EQ29 uncharacterized protein LOC111436360 isoform X2

2.6e-116

98.2

Show/hide

Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DAC LATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

A0A6J1ETI1 uncharacterized protein LOC111436360 isoform X4

2.6e-116

98.2

Show/hide

Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSPAEKAI+DAC LATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVVGTKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

A0A6J1JUZ0 uncharacterized protein LOC111488583 isoform X1

3.8e-115

97.3

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Query:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
        MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE
Subjt:  MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELE

Query:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG
         PEKQLSP+EKAI+DACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDT ECQPKSVEEEKHVNKKKRVIKKPSKEG
Subjt:  TPEKQLSPAEKAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEG

Query:  LVVVGTKTQQLAYSAVKEATGM
        LVVV TKTQQLAYSAVKEATG+
Subjt:  LVVVGTKTQQLAYSAVKEATGM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05950.1 unknown protein

1.1e-39

46.82

Show/hide

Query:  TGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELETPE
        T  CPTEDAI ALL+ LV+P+LPSK +  + P  ++ +SVAKQ+HAVVLLYNYYHRK +PHLE LSFE+F  LA V+KPALL H+K        E     
Subjt:  TGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELETPE

Query:  KQLSPAEKAILDACDLATCLYTSKDENI-EGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEGLV
         Q    EK I+DAC L+  L  S D  I    P+ +VAV L+DS+K+ C+L  SSITQGVWS++E          K +E+EK   + ++      +EG+ 
Subjt:  KQLSPAEKAILDACDLATCLYTSKDENI-EGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEGLV

Query:  VVGTKTQQLAYSAVKEATGM
              Q++A++ VKEATG+
Subjt:  VVGTKTQQLAYSAVKEATGM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTGCAACAGGTGTATGCCCAACCGAGGATGCCATACTTGCATTATTGGATTACTTAGTTGAACCTATGCTTCCTTCAAAGTCATCTTCAATAGAAAATCCACCACT
AGCTTTGCTGCAATCAGTTGCAAAACAGATGCATGCCGTTGTTTTGTTATACAACTACTACCACAGGAAACAACACCCACATCTTGAATTTTTGAGTTTTGAGGCATTTT
GCAAATTAGCTGTGGTTGTTAAACCAGCTTTGTTGTCTCACATGAAACTCATGCAAAGCTCTGATGATATTGAATTGGAAACTCCCGAGAAGCAGCTTTCTCCAGCAGAA
AAAGCAATATTGGATGCATGTGATTTAGCCACTTGTCTATATACATCAAAAGATGAAAATATAGAGGGCTGGCCCCTTTCCAAGGTTGCCGTTTTTTTGATCGACTCCAA
GAAGGAGCATTGCCATTTGCTGTTTAGTTCCATCACTCAAGGAGTTTGGTCTGTCATTGAACAAAATTTAGATACCTCTGAATGCCAACCAAAAAGCGTGGAAGAGGAAA
AACATGTAAACAAAAAGAAAAGAGTGATTAAGAAACCTTCAAAAGAGGGGCTAGTTGTTGTTGGAACTAAGACTCAGCAGCTTGCATATTCAGCAGTCAAGGAAGCAACT
GGTATGTATTCTACTTTGTTAACTCATCGATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSATGVCPTEDAILALLDYLVEPMLPSKSSSIENPPLALLQSVAKQMHAVVLLYNYYHRKQHPHLEFLSFEAFCKLAVVVKPALLSHMKLMQSSDDIELETPEKQLSPAE
KAILDACDLATCLYTSKDENIEGWPLSKVAVFLIDSKKEHCHLLFSSITQGVWSVIEQNLDTSECQPKSVEEEKHVNKKKRVIKKPSKEGLVVVGTKTQQLAYSAVKEAT
GMYSTLLTHR

Carg22606 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome