; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22628 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22628
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpolcalcin Phl p 7-like
Genome locationCarg_Chr17:4934661..4934915
RNA-Seq ExpressionCarg22628
SyntenyCarg22628
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150429.1 polcalcin Syr v 3-like [Momordica charantia]1.5e-3184.52Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MA+    RAECERIFNRFD NGDG+ISLSELE+AL ALGSSSPEEVRRRMSEIDKDG+G+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]1.5e-39100Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

XP_022992461.1 polcalcin Phl p 7-like [Cucurbita maxima]8.1e-3897.62Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MAESEA+RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDEL EFQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

XP_023549323.1 polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]9.6e-3997.62Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MAESEA+RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVC+RL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]2.7e-3388.1Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MA+SE  R ECERIF RFD +GDGKISLSELE+AL ALGSSSPEEVRRRMSEIDKDGNGFISLDELC+FQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein3.2e-3284.52Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MA+S+  R ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNG+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like3.6e-3184.52Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNGFISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

A0A6J1DA15 polcalcin Syr v 3-like7.2e-3284.52Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MA+    RAECERIFNRFD NGDG+ISLSELE+AL ALGSSSPEEVRRRMSEIDKDG+G+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like7.2e-40100Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

A0A6J1JTM0 polcalcin Phl p 7-like3.9e-3897.62Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL
        MAESEA+RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDEL EFQRANPDLMKEVCKRL
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 31.5e-1858.54Show/hide
Query:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK
        MA+     AE ERIF RFD NGDGKIS SEL   L  LGS +PEE++R M+EID DG+GFIS +E   F RAN  L+K+V K
Subjt:  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK

O82040 Polcalcin Phl p 75.2e-1961.84Show/hide
Query:  MRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK
        M  + ERIF RFD NGDGKISLSEL +AL  LGS+S +EV+R M+EID DG+GFI  +E   F  ANP LMK+V K
Subjt:  MRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK

P58171 Polcalcin Syr v 31.1e-1862.16Show/hide
Query:  AECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK
        AE ERIF RFD NGDGKIS SEL   L  LGS +PEE++R M+EID DG+GFIS +E  +F RAN  L+K+V K
Subjt:  AECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK

P94092 Polcalcin Cyn d 72.6e-1861.64Show/hide
Query:  ECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK
        + E IF RFD NGDGKISL+EL +AL  LGS+S +EV+R M+EID DG+GFI  DE   F  ANP LMK+V K
Subjt:  ECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK

Q84V36 Polcalcin Che a 33.0e-1964.86Show/hide
Query:  AECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK
        A+ ERIF RFD NGDGKIS SEL +AL  LGS +P+EVRR M+EID DG+GFIS DE  +F RAN  L+K+V K
Subjt:  AECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G66400.1 calmodulin like 231.0e-0950.88Show/hide
Query:  ECERIFNRFDCNGDGKISLSELENALHALG-SSSPEEVRRRMSEIDKDGNGFISLDE
        + +++F RFD N DGKIS+ EL++ + AL  ++S EE +  M E D DGNGFI LDE
Subjt:  ECERIFNRFDCNGDGKISLSELENALHALG-SSSPEEVRRRMSEIDKDGNGFISLDE

AT1G73630.1 EF hand calcium-binding protein family1.3e-0944.62Show/hide
Query:  ECERIFNRFDCNGDGKISLSELENALHALGSS-SPEEVRRRMSEIDKDGNGFISLDELCEFQRAN
        E +++F++FD NGDGKIS+SEL N   ++G+S + EE+ R + EID D +GFI+ +E     R++
Subjt:  ECERIFNRFDCNGDGKISLSELENALHALGSS-SPEEVRRRMSEIDKDGNGFISLDELCEFQRAN

AT3G03430.1 Calcium-binding EF-hand family protein5.0e-1754.67Show/hide
Query:  RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK
        +AE +RIF +FD NGDGKIS +EL +AL  LGS + E+++R M+EID DG+G+IS  E  +F  AN  LMK+V K
Subjt:  RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK

AT5G17480.1 pollen calcium-binding protein 15.0e-1756Show/hide
Query:  RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK
        +AE +RIF +FD NGDGKIS +ELE AL  LGS + ++V+R M+EID DG+G IS  E  +F  AN  LMK+V K
Subjt:  RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCK

AT5G37770.1 EF hand calcium-binding protein family2.0e-1052.63Show/hide
Query:  ECERIFNRFDCNGDGKISLSELENALHALG-SSSPEEVRRRMSEIDKDGNGFISLDE
        + +++F RFD NGDGKIS+ EL+  + AL  ++SPEE    M + D DGNGFI LDE
Subjt:  ECERIFNRFDCNGDGKISLSELENALHALG-SSSPEEVRRRMSEIDKDGNGFISLDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGTCGGAGGCAATGAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGC
ACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATC
CCGATTTGATGAAGGAGGTCTGCAAAAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGTCGGAGGCAATGAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGC
ACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATC
CCGATTTGATGAAGGAGGTCTGCAAAAGGCTTTAG
Protein sequenceShow/hide protein sequence
MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL