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Carg22639 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22639
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:4753640..4755945
RNA-Seq ExpressionCarg22639
SyntenyCarg22639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013858.1 hypothetical protein SDJN02_24027, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-132100Show/hide
Query:  MPITKKCFFIRYPLFLMKQAKSRLRDSRENHSRTVVPSLNGHGSRHATEKRILGESPMRCQICCNLQKSIGSTIPDTGESVRLHPAARPSSRRHQPFIRE
        MPITKKCFFIRYPLFLMKQAKSRLRDSRENHSRTVVPSLNGHGSRHATEKRILGESPMRCQICCNLQKSIGSTIPDTGESVRLHPAARPSSRRHQPFIRE
Subjt:  MPITKKCFFIRYPLFLMKQAKSRLRDSRENHSRTVVPSLNGHGSRHATEKRILGESPMRCQICCNLQKSIGSTIPDTGESVRLHPAARPSSRRHQPFIRE

Query:  WTKKHVSSFVFPSGTSTTNDSITSVPGLPSITSGWTKLQSLSTGSSRKPRFDINFSKTPYSKAISPHHTPTNKRLVPLWPIEPPNQRPYLTNQHQNFTTI
        WTKKHVSSFVFPSGTSTTNDSITSVPGLPSITSGWTKLQSLSTGSSRKPRFDINFSKTPYSKAISPHHTPTNKRLVPLWPIEPPNQRPYLTNQHQNFTTI
Subjt:  WTKKHVSSFVFPSGTSTTNDSITSVPGLPSITSGWTKLQSLSTGSSRKPRFDINFSKTPYSKAISPHHTPTNKRLVPLWPIEPPNQRPYLTNQHQNFTTI

Query:  QILKEINSEIHPNIFRDRIDSPRFTKQIKRSVQSTT
        QILKEINSEIHPNIFRDRIDSPRFTKQIKRSVQSTT
Subjt:  QILKEINSEIHPNIFRDRIDSPRFTKQIKRSVQSTT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATTACAAAAAAATGCTTTTTTATTAGGTACCCTTTGTTCTTGATGAAACAAGCTAAGTCGAGGCTTAGAGACTCGAGAGAAAATCACTCCAGAACGGTGGTTCC
AAGCTTGAACGGTCATGGATCTCGGCATGCGACCGAGAAGAGGATACTGGGTGAGTCTCCAATGAGATGCCAAATCTGCTGCAACCTACAAAAATCGATTGGTTCGACTA
TACCCGACACTGGTGAATCGGTTCGACTTCATCCTGCAGCACGGCCATCCTCAAGGAGACATCAGCCATTTATAAGGGAATGGACAAAGAAACATGTCTCCTCTTTCGTG
TTTCCCTCGGGTACATCCACGACAAATGACTCGATCACCAGTGTCCCCGGTCTTCCATCGATAACTTCAGGATGGACGAAGCTCCAATCTCTCAGTACTGGTAGTAGCAG
GAAGCCCAGATTTGACATCAACTTCTCTAAGACTCCCTATTCCAAGGCCATCTCCCCTCACCACACACCGACTAACAAAAGGCTTGTACCTCTGTGGCCGATCGAACCTC
CTAACCAACGACCATACCTAACAAATCAACACCAAAATTTCACAACCATACAAATACTAAAGGAGATTAACAGTGAAATTCATCCCAATATTTTCAGAGACCGAATCGAT
TCCCCTCGATTTACGAAACAAATTAAGAGAAGTGTTCAATCTACGACC
mRNA sequenceShow/hide mRNA sequence
AATCGGTTGTTGGATATTCTCCAGATAAAAGTCAGAATATGGTTCTTACGGGGTTTAACAAAGGGGTTTAACAAAGCATATGCCAATTACAAAAAAATGCTTTTTTATTA
GGTACCCTTTGTTCTTGATGAAACAAGCTAAGTCGAGGCTTAGAGACTCGAGAGAAAATCACTCCAGAACGGTGGTTCCAAGCTTGAACGGTCATGGATCTCGGCATGCG
ACCGAGAAGAGGATACTGGGTGAGTCTCCAATGAGATGCCAAATCTGCTGCAACCTACAAAAATCGATTGGTTCGACTATACCCGACACTGGTGAATCGGTTCGACTTCA
TCCTGCAGCACGGCCATCCTCAAGGAGACATCAGCCATTTATAAGGGAATGGACAAAGAAACATGTCTCCTCTTTCGTGTTTCCCTCGGGTACATCCACGACAAATGACT
CGATCACCAGTGTCCCCGGTCTTCCATCGATAACTTCAGGATGGACGAAGCTCCAATCTCTCAGTACTGGTAGTAGCAGGAAGCCCAGATTTGACATCAACTTCTCTAAG
ACTCCCTATTCCAAGGCCATCTCCCCTCACCACACACCGACTAACAAAAGGCTTGTACCTCTGTGGCCGATCGAACCTCCTAACCAACGACCATACCTAACAAATCAACA
CCAAAATTTCACAACCATACAAATACTAAAGGAGATTAACAGTGAAATTCATCCCAATATTTTCAGAGACCGAATCGATTCCCCTCGATTTACGAAACAAATTAAGAGAA
GTGTTCAATCTACGACC
Protein sequenceShow/hide protein sequence
MPITKKCFFIRYPLFLMKQAKSRLRDSRENHSRTVVPSLNGHGSRHATEKRILGESPMRCQICCNLQKSIGSTIPDTGESVRLHPAARPSSRRHQPFIREWTKKHVSSFV
FPSGTSTTNDSITSVPGLPSITSGWTKLQSLSTGSSRKPRFDINFSKTPYSKAISPHHTPTNKRLVPLWPIEPPNQRPYLTNQHQNFTTIQILKEINSEIHPNIFRDRID
SPRFTKQIKRSVQSTT