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Carg22651 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22651
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin efflux carrier component
Genome locationCarg_Chr12:8957706..8958857
RNA-Seq ExpressionCarg22651
SyntenyCarg22651
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0060918 - auxin transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004776 - Membrane transport protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586145.1 Auxin efflux carrier component 5, partial [Cucurbita argyrosperma subsp. sororia]4.5e-4778.72Show/hide
Query:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA
        MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK                           + GIFMALQEKLIA
Subjt:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA

Query:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        CG TLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
Subjt:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

KAG7020968.1 Auxin efflux carrier component 5, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-53100Show/hide
Query:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKSAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIA
        MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKSAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIA
Subjt:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKSAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIA

Query:  MGLHGDVLRVAIIQ
        MGLHGDVLRVAIIQ
Subjt:  MGLHGDVLRVAIIQ

XP_022937707.1 auxin efflux carrier component 5 [Cucurbita moschata]4.5e-4778.72Show/hide
Query:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA
        MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK                           + GIFMALQEKLIA
Subjt:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA

Query:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        CG TLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
Subjt:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

XP_022966048.1 auxin efflux carrier component 5 [Cucurbita maxima]4.5e-4778.72Show/hide
Query:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA
        MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK                           + GIFMALQEKLIA
Subjt:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA

Query:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        CG TLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
Subjt:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

XP_023536981.1 auxin efflux carrier component 5 [Cucurbita pepo subsp. pepo]4.5e-4778.72Show/hide
Query:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA
        MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK                           + GIFMALQEKLIA
Subjt:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA

Query:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        CG TLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
Subjt:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LH23 Auxin efflux carrier component6.5e-3665.96Show/hide
Query:  GEGGKDVEGGAMEVEE--RRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA
        GEG KD+EG  MEVEE  R S SH+PS K LMKKVW+K+  NPNSYAC IG AWAFVAK                           + GIFMALQEKLIA
Subjt:  GEGGKDVEGGAMEVEE--RRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA

Query:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        CG TLTI+GMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
Subjt:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

A0A2C9VF50 Auxin efflux carrier component1.6e-2960Show/hide
Query:  KDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACGVTLT
        KD+EG +  V + +  S KPSF  LMK VWLK+  NPNSYACIIGL WAF+AK                           S GIFMALQEKLIACG  LT
Subjt:  KDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACGVTLT

Query:  IIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        ++GMVL+FIAGPAAMAIGSIA+GLHGDVLRVAIIQ
Subjt:  IIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

A0A6J1D820 Auxin efflux carrier component4.5e-3768.31Show/hide
Query:  MVGEGGKDVEGGAMEVEERR-SNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLI
        MV EG K++EG AMEVE R  SNSH+ SFK LMKKVWLKL ANPNSYACIIG AWAFVAK                           + GIFMALQEKLI
Subjt:  MVGEGGKDVEGGAMEVEERR-SNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLI

Query:  ACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        ACG +LTIIGMVLKFIAGPAAMAIGS+AMGLHGDVLRVAIIQ
Subjt:  ACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

A0A6J1FBZ5 Auxin efflux carrier component2.2e-4778.72Show/hide
Query:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA
        MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK                           + GIFMALQEKLIA
Subjt:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA

Query:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        CG TLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
Subjt:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

A0A6J1HQQ5 Auxin efflux carrier component2.2e-4778.72Show/hide
Query:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA
        MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK                           + GIFMALQEKLIA
Subjt:  MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIA

Query:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        CG TLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
Subjt:  CGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

SwissProt top hitse value%identityAlignment
D5A7J3 Probable auxin efflux carrier component 5b3.5e-1841.01Show/hide
Query:  GEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACG
        G    DVE GA       + + + S   L++ VWLK+  NPN YA ++G+AWA V                             S G+FMALQ+K+I CG
Subjt:  GEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACG

Query:  VTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
          LT++GM L+F+AGPAA A+G+ A+GL GD+LR+AIIQ
Subjt:  VTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

Q5JLM1 Probable auxin efflux carrier component 5a2.0e-1845Show/hide
Query:  GKDVE----GGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIAC
        GKDVE      A       + + KPS   L+K V  KL  NPN+YA  +G+ WA +A                            S G+FMA QEK+IAC
Subjt:  GKDVE----GGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIAC

Query:  GVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
        G +   +G+VLKF  GPAAMAIGSIA+GL GDVLRVAIIQ
Subjt:  GVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

Q8RWZ6 Auxin efflux carrier component 42.5e-1635.62Show/hide
Query:  GEGGKDVEGGAMEVEERRSNS-----------------HKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK----------------------
        GEG +++E     + +  SNS                 H P      +L++  VW KL+ NPN+Y+ +IGL WA VA                       
Subjt:  GEGGKDVEGGAMEVEERRSNS-----------------HKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK----------------------

Query:  -----SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
             S G+FMALQ K+IACG ++    M ++FI GPA MA+  IA+GLHGD+LR+AI+Q
Subjt:  -----SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

Q9FFD0 Auxin efflux carrier component 57.7e-2656.52Show/hide
Query:  SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSI
        SF  +M  VWLKL  NPN Y+CI+G+AWAF++                            + GIFMALQEKLI CG +LT++GMVLKFIAGPAAMAIGSI
Subjt:  SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSI

Query:  AMGLHGDVLRVAIIQ
         +GLHGDVLRVAIIQ
Subjt:  AMGLHGDVLRVAIIQ

Q9S7Z8 Auxin efflux carrier component 33.3e-1638.93Show/hide
Query:  GGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVA---------------------------KSAGIFMALQEKLIACGVTLTIIGM
        GGA   + +         +L++  VW KL+ NPN+Y+ +IGL WA VA                            S G+FMALQ KLIACG ++    M
Subjt:  GGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVA---------------------------KSAGIFMALQEKLIACGVTLTIIGM

Query:  VLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
         ++F+ GPA MA+ +IA+GL GD+LRVAI+Q
Subjt:  VLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

Arabidopsis top hitse value%identityAlignment
AT1G23080.1 Auxin efflux carrier family protein2.0e-1639.1Show/hide
Query:  AMEVEERRSNSHKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVA---------------------------KSAGIFMALQEKLIACGVTLTII
        A+E  E     H P      +L++  VW KL+ NPN+Y+ +IGL WA VA                            S G+FMALQ KLIACG +    
Subjt:  AMEVEERRSNSHKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVA---------------------------KSAGIFMALQEKLIACGVTLTII

Query:  GMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
         M ++F  GPA MA+ ++A+GL GD+LRVAI+Q
Subjt:  GMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

AT1G70940.1 Auxin efflux carrier family protein2.3e-1738.93Show/hide
Query:  GGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVA---------------------------KSAGIFMALQEKLIACGVTLTIIGM
        GGA   + +         +L++  VW KL+ NPN+Y+ +IGL WA VA                            S G+FMALQ KLIACG ++    M
Subjt:  GGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVA---------------------------KSAGIFMALQEKLIACGVTLTIIGM

Query:  VLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
         ++F+ GPA MA+ +IA+GL GD+LRVAI+Q
Subjt:  VLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

AT2G01420.1 Auxin efflux carrier family protein1.8e-1735.62Show/hide
Query:  GEGGKDVEGGAMEVEERRSNS-----------------HKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK----------------------
        GEG +++E     + +  SNS                 H P      +L++  VW KL+ NPN+Y+ +IGL WA VA                       
Subjt:  GEGGKDVEGGAMEVEERRSNS-----------------HKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK----------------------

Query:  -----SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
             S G+FMALQ K+IACG ++    M ++FI GPA MA+  IA+GLHGD+LR+AI+Q
Subjt:  -----SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

AT2G01420.2 Auxin efflux carrier family protein1.8e-1735.62Show/hide
Query:  GEGGKDVEGGAMEVEERRSNS-----------------HKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK----------------------
        GEG +++E     + +  SNS                 H P      +L++  VW KL+ NPN+Y+ +IGL WA VA                       
Subjt:  GEGGKDVEGGAMEVEERRSNS-----------------HKP----SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK----------------------

Query:  -----SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ
             S G+FMALQ K+IACG ++    M ++FI GPA MA+  IA+GLHGD+LR+AI+Q
Subjt:  -----SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRVAIIQ

AT5G16530.1 Auxin efflux carrier family protein5.5e-2756.52Show/hide
Query:  SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSI
        SF  +M  VWLKL  NPN Y+CI+G+AWAF++                            + GIFMALQEKLI CG +LT++GMVLKFIAGPAAMAIGSI
Subjt:  SFKLLMKKVWLKLVANPNSYACIIGLAWAFVAK---------------------------SAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSI

Query:  AMGLHGDVLRVAIIQ
         +GLHGDVLRVAIIQ
Subjt:  AMGLHGDVLRVAIIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAGAAGGAGGGAAGGATGTGGAGGGAGGAGCCATGGAGGTTGAGGAAAGAAGAAGCAATAGCCACAAGCCTTCTTTCAAGCTTTTGATGAAGAAAGTTTGGCT
AAAGTTGGTTGCAAATCCCAACTCTTATGCTTGTATCATTGGTTTGGCTTGGGCATTTGTTGCAAAAAGTGCAGGAATCTTCATGGCATTGCAAGAGAAGTTGATAGCTT
GTGGAGTTACCCTTACCATAATAGGAATGGTTCTAAAGTTCATTGCTGGACCAGCTGCCATGGCCATTGGCTCCATTGCCATGGGCTTGCATGGTGACGTTCTACGTGTC
GCTATCATACAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAGAAGGAGGGAAGGATGTGGAGGGAGGAGCCATGGAGGTTGAGGAAAGAAGAAGCAATAGCCACAAGCCTTCTTTCAAGCTTTTGATGAAGAAAGTTTGGCT
AAAGTTGGTTGCAAATCCCAACTCTTATGCTTGTATCATTGGTTTGGCTTGGGCATTTGTTGCAAAAAGTGCAGGAATCTTCATGGCATTGCAAGAGAAGTTGATAGCTT
GTGGAGTTACCCTTACCATAATAGGAATGGTTCTAAAGTTCATTGCTGGACCAGCTGCCATGGCCATTGGCTCCATTGCCATGGGCTTGCATGGTGACGTTCTACGTGTC
GCTATCATACAG
Protein sequenceShow/hide protein sequence
MVGEGGKDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKSAGIFMALQEKLIACGVTLTIIGMVLKFIAGPAAMAIGSIAMGLHGDVLRV
AIIQ