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Carg22690 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22690
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBHLH domain-containing protein
Genome locationCarg_Chr11:4728262..4728514
RNA-Seq ExpressionCarg22690
SyntenyCarg22690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5131831.1 hypothetical protein JHK84_038228 [Glycine max]7.3e-0783.33Show/hide
Query:  RSMACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        R MACR+ + GNLDP+RKRSGGLRTKQAGRGSCRGS
Subjt:  RSMACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
KAG6588244.1 Transcription factor LHW, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0897.06Show/hide
Query:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRG+
Subjt:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
KAG7023802.1 hypothetical protein SDJN02_14828, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-1192.68Show/hide
Query:  KLSARRSMACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        KLSARRSMACRR+IVGN+DP RKRSGGLRTKQAGRGSCRGS
Subjt:  KLSARRSMACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
PIN10641.1 hypothetical protein CDL12_16762 [Handroanthus impetiginosus]4.3e-0791.18Show/hide
Query:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MAC+R I GNLDPERKRSGGLRTKQAGRGSCRGS
Subjt:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
XP_016900899.1 PREDICTED: uncharacterized protein LOC103491944 [Cucumis melo]2.9e-0897.06Show/hide
Query:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MACRR+IVGNLDPERKRSGGLRTKQAGRGSCRGS
Subjt:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
TrEMBL top hitse value%identityAlignment
A0A1S4DY36 uncharacterized protein LOC1034919441.4e-0897.06Show/hide
Query:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MACRR+IVGNLDPERKRSGGLRTKQAGRGSCRGS
Subjt:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
A0A2C9W1D8 Uncharacterized protein2.4e-0850Show/hide
Query:  MEQIMAVYKIQTCGIVFFQQKPVFAGSALFHFHYTLFSLSLKLSARRSMACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MEQI A +K++ CG                           KL   R M CRR + GNLDPERKRSGGLRTKQAGRGSCRGS
Subjt:  MEQIMAVYKIQTCGIVFFQQKPVFAGSALFHFHYTLFSLSLKLSARRSMACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
A0A2G9GZE1 Uncharacterized protein2.1e-0791.18Show/hide
Query:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MAC+R I GNLDPERKRSGGLRTKQAGRGSCRGS
Subjt:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
B9RIZ7 Uncharacterized protein3.5e-0748.81Show/hide
Query:  MEQIMAVYKIQTCGIVFFQQKPVFAGSALFHFHYTLFSLSLKLSARRSMACRRK--IVGNLDPERKRSGGLRTKQAGRGSCRGS
        MEQIMA++K++ C     ++K +F                        M CRR   I GNLDPERKRSGGLRTKQAGRGSCRGS
Subjt:  MEQIMAVYKIQTCGIVFFQQKPVFAGSALFHFHYTLFSLSLKLSARRSMACRRK--IVGNLDPERKRSGGLRTKQAGRGSCRGS
V7BY75 Uncharacterized protein4.6e-0788.24Show/hide
Query:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MACR  +VGNLDP+RKRSGGLRTKQAGRGSCRGS
Subjt:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27228.1 conserved peptide upstream open reading frame 61.1e-0882.35Show/hide
Query:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS
        MACR  I  +LDPERK+SGGLRTKQAGRGSCRGS
Subjt:  MACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGATCATGGCAGTCTACAAGATTCAGACCTGTGGGATAGTGTTTTTTCAGCAGAAACCGGTTTTCGCTGGTTCTGCTCTGTTTCACTTTCATTACACCCTTTT
CTCCCTTTCTCTCAAGCTTTCGGCTCGCCGGAGCATGGCTTGCCGTAGAAAAATTGTGGGAAATCTTGACCCAGAAAGGAAAAGAAGTGGTGGTTTGAGAACGAAGCAGG
CGGGGAGAGGATCGTGCCGGGGAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGATCATGGCAGTCTACAAGATTCAGACCTGTGGGATAGTGTTTTTTCAGCAGAAACCGGTTTTCGCTGGTTCTGCTCTGTTTCACTTTCATTACACCCTTTT
CTCCCTTTCTCTCAAGCTTTCGGCTCGCCGGAGCATGGCTTGCCGTAGAAAAATTGTGGGAAATCTTGACCCAGAAAGGAAAAGAAGTGGTGGTTTGAGAACGAAGCAGG
CGGGGAGAGGATCGTGCCGGGGAAGTTAG
Protein sequenceShow/hide protein sequence
MEQIMAVYKIQTCGIVFFQQKPVFAGSALFHFHYTLFSLSLKLSARRSMACRRKIVGNLDPERKRSGGLRTKQAGRGSCRGS