; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22700 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22700
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionML domain-containing protein
Genome locationCarg_Chr11:4812047..4814865
RNA-Seq ExpressionCarg22700
SyntenyCarg22700
Gene Ontology termsGO:0032366 - intracellular sterol transport (biological process)
GO:0032934 - sterol binding (molecular function)
InterPro domainsIPR003172 - MD-2-related lipid-recognition domain
IPR014756 - Immunoglobulin E-set
IPR033917 - ML domain, phosphatidylinositol/phosphatidylglycerol transfer protein
IPR039670 - Sterol transport protein NPC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588252.1 Protein IQ-DOMAIN 1, partial [Cucurbita argyrosperma subsp. sororia]5.0e-8498.75Show/hide
Query:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
        MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
Subjt:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI

Query:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLV
        KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESL+
Subjt:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLV

KAG7022171.1 putative phosphatidylglycerol/phosphatidylinositol transfer protein [Cucurbita argyrosperma subsp. argyrosperma]3.1e-86100Show/hide
Query:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
        MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
Subjt:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI

Query:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Subjt:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

XP_022933704.1 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucurbita moschata]1.9e-8396.93Show/hide
Query:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
        MDGRMFSRILFLLFAVHLLLPAI AAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSAS+EKNLSGGKFEVEVSLFGV IHSESHDLCE TSCP+
Subjt:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI

Query:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Subjt:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

XP_023001324.1 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucurbita maxima]8.6e-8496.93Show/hide
Query:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
        MDGR+FSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
Subjt:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI

Query:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        KPGKFSLSHSQSLPPFTPPGMYSVKIILKD +KEQLTCISFKLKIVFGDEKSAIP+ESLVAES
Subjt:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

XP_023520653.1 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucurbita pepo subsp. pepo]7.0e-8699.39Show/hide
Query:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
        MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
Subjt:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI

Query:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Subjt:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

TrEMBL top hitse value%identityAlignment
A0A0A0LXM9 ML domain-containing protein1.1e-6579.5Show/hide
Query:  GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKP
        GR F+RI+FLLFAV LLLP I AAKF+YCD+RG+YPVKV  L+VSP PVK G+PATF VSAS+EKNLSGGKF VEVSLFG+HIHSESHDLCEETSCPI P
Subjt:  GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKP

Query:  GKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        GKFSLSHSQSLPPFTPPG Y+VKIIL+D+  +QLTCI+FKLKIVFGD +SAI E+ LVAES
Subjt:  GKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

A0A1S3B808 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G02821797.8e-6780.75Show/hide
Query:  GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKP
        GR F+RI+FLLF V LL P I AAKF+YCD+RGNYPVKVD L+VSP PVK G+PATF VSAS+EKNLSGGKF VEVSLFG+HIHSESHDLCEETSCPI P
Subjt:  GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKP

Query:  GKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        GKFSLSHSQSLPPFTPPG Y VKIIL+D+  +QLTCISFKLKIVFGD +SAI E+SLVAES
Subjt:  GKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

A0A6J1CKB6 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G02821791.8e-6378.26Show/hide
Query:  GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKP
        G  F RIL L FAVHLL PAI AAKF+YCDKRGNY VKV  L+VSP PVK GKPATF VSAS++K LSGGKF VEVSLFG+HIHSE+HDLCE TSCP+ P
Subjt:  GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKP

Query:  GKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        GKFSL+HSQSLPPFTPPG YSVKI+LKD    QLTCI+FKLKIVFGD +SAI EESLVAES
Subjt:  GKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

A0A6J1F0H6 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G02821799.2e-8496.93Show/hide
Query:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
        MDGRMFSRILFLLFAVHLLLPAI AAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSAS+EKNLSGGKFEVEVSLFGV IHSESHDLCE TSCP+
Subjt:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI

Query:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Subjt:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

A0A6J1KME8 putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G02821794.1e-8496.93Show/hide
Query:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
        MDGR+FSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI
Subjt:  MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPI

Query:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
        KPGKFSLSHSQSLPPFTPPGMYSVKIILKD +KEQLTCISFKLKIVFGDEKSAIP+ESLVAES
Subjt:  KPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

SwissProt top hitse value%identityAlignment
O94183 Phosphatidylglycerol/phosphatidylinositol transfer protein2.3e-0731.09Show/hide
Query:  DYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASS---EKNLSGGKFEVEVSLFGVHIHSESHDLCE-----ETSCPIKPGKFSLSHSQSLPPFTPPG
        +YC+      + +  + +SP P   GK  T A++AS    EK   G    +EV    + +  ++ DLCE     E  CP+ PG  +L+    LP   PPG
Subjt:  DYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASS---EKNLSGGKFEVEVSLFGVHIHSESHDLCE-----ETSCPIKPGKFSLSHSQSLPPFTPPG

Query:  MYSVKIILKDTDKEQLTCI
         Y+V+  + ++D E +TC+
Subjt:  MYSVKIILKDTDKEQLTCI

Q9AST8 MD-2-related lipid-recognition protein ROSY12.0e-1130.34Show/hide
Query:  SRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGG---KFEVEVSLFGVHIHSESHDLCEETSCPIKPG
        +++L LL       PA+   KF  CD    YP+KV  +++SP PVK        ++  + K +S G     ++ V +F V   ++S+ LC+ T+CP+ PG
Subjt:  SRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGG---KFEVEVSLFGVHIHSESHDLCEETSCPIKPG

Query:  KFSLSHSQSLPPFTPPGMYSVKIILKDTD---KEQLTCISFKLKI
           L+      P          II+  TD   KE + CI F +K+
Subjt:  KFSLSHSQSLPPFTPPGMYSVKIILKDTD---KEQLTCISFKLKI

Arabidopsis top hitse value%identityAlignment
AT2G16005.1 MD-2-related lipid recognition domain-containing protein1.4e-1230.34Show/hide
Query:  SRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGG---KFEVEVSLFGVHIHSESHDLCEETSCPIKPG
        +++L LL       PA+   KF  CD    YP+KV  +++SP PVK        ++  + K +S G     ++ V +F V   ++S+ LC+ T+CP+ PG
Subjt:  SRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGG---KFEVEVSLFGVHIHSESHDLCEETSCPIKPG

Query:  KFSLSHSQSLPPFTPPGMYSVKIILKDTD---KEQLTCISFKLKI
           L+      P          II+  TD   KE + CI F +K+
Subjt:  KFSLSHSQSLPPFTPPGMYSVKIILKDTD---KEQLTCISFKLKI

AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein7.1e-3650.38Show/hide
Query:  LLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFT
        L+   ++A    YCD    Y VKV G+ ++PYP+  G+PATF +SA+++  +S GK  +EVS FG HIHSE+HDLC+ETSCP+  G F ++HSQ LP +T
Subjt:  LLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFT

Query:  PPGMYSVKIILKDTDKEQLTCISFKLKIVFG
        PPG YS+K+ + D  K++LTCI F   I FG
Subjt:  PPGMYSVKIILKDTDKEQLTCISFKLKIVFG

AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein1.6e-3244.3Show/hide
Query:  LLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFT
        L+   ++A    YCD    Y VKV G+ ++PYP+  G+PATF +SA+++  +S GK  +EVS FG HIHSE+HDLC+ETSCP+  G F ++HSQ LP +T
Subjt:  LLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFT

Query:  PP------------------GMYSVKIILKDTDKEQLTCISFKLKIVFG
        PP                  G YS+K+ + D  K++LTCI F   I FG
Subjt:  PP------------------GMYSVKIILKDTDKEQLTCISFKLKIVFG

AT3G44100.1 MD-2-related lipid recognition domain-containing protein5.4e-3651.43Show/hide
Query:  ILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLS
        +L LL +V   LPA+ A  F YCDKR + PVKV G+K+SP PV  G  ATF +  S+ +++SGGK  + V   G+ +H+E+HDLC+ET+CP+ PG F LS
Subjt:  ILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLS

Query:  HSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFG
        HSQ+LP  TPPG Y++K+ + D +  +LTCISFK KI  G
Subjt:  HSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFG

AT5G06480.1 Immunoglobulin E-set superfamily protein1.6e-3245.77Show/hide
Query:  RMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPG
        R+F+ +      + LL+  I A    YC++   Y VKV  + +SP P+  G+PATF +SA++ + +S GK  +EVS FG H+HSE+HDLC ETSCPI+ G
Subjt:  RMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPG

Query:  KFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKI
         F ++HSQ LP +TPPG Y +K+ + D  K++LTCI F   I
Subjt:  KFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGGCGAATGTTCAGTCGCATCCTCTTTCTTCTCTTCGCGGTTCATTTACTCTTGCCGGCCATCTCCGCTGCCAAATTCGACTATTGCGACAAGAGAGGTAATTA
TCCTGTGAAGGTCGATGGACTTAAAGTATCTCCTTATCCAGTGAAGGGTGGGAAGCCTGCCACGTTTGCCGTTTCAGCCTCTTCTGAGAAAAATCTCTCCGGTGGAAAGT
TCGAGGTCGAGGTTTCTTTATTTGGCGTGCATATACATTCCGAAAGTCATGATCTTTGTGAAGAAACTTCTTGTCCTATTAAACCTGGAAAATTCTCCTTATCGCACTCG
CAAAGCTTACCTCCATTTACGCCACCAGGTATGTATTCTGTGAAAATAATATTGAAAGATACGGATAAGGAGCAGTTGACTTGCATCAGCTTCAAGCTCAAAATTGTTTT
TGGTGACGAGAAATCAGCAATACCTGAAGAATCCTTGGTTGCTGAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
TTCTATCGCTCGTCGAGGAGTTTTCTTCTTTCTTCATCGTCACCCATTTCCCTTCAGATCGGCCCTTCAACGCCGATCATCCACGAGATCATGGACGGGCGAATGTTCAG
TCGCATCCTCTTTCTTCTCTTCGCGGTTCATTTACTCTTGCCGGCCATCTCCGCTGCCAAATTCGACTATTGCGACAAGAGAGGTAATTATCCTGTGAAGGTCGATGGAC
TTAAAGTATCTCCTTATCCAGTGAAGGGTGGGAAGCCTGCCACGTTTGCCGTTTCAGCCTCTTCTGAGAAAAATCTCTCCGGTGGAAAGTTCGAGGTCGAGGTTTCTTTA
TTTGGCGTGCATATACATTCCGAAAGTCATGATCTTTGTGAAGAAACTTCTTGTCCTATTAAACCTGGAAAATTCTCCTTATCGCACTCGCAAAGCTTACCTCCATTTAC
GCCACCAGGTATGTATTCTGTGAAAATAATATTGAAAGATACGGATAAGGAGCAGTTGACTTGCATCAGCTTCAAGCTCAAAATTGTTTTTGGTGACGAGAAATCAGCAA
TACCTGAAGAATCCTTGGTTGCTGAGAGTTGAAAATTGCCAGTTGAAGTTAATGTTCCTGCGACTTTCTCTGTTTTTCAGCTTCAGTATGTGTAATATTTCGACTACTGC
TACTACAAGGATTTGACCCGACTCGTGTTGTTGTTTGTGTGTTTATAAAATCTTCTGGACAAATGCAAGTTCTTCAATATGCTAGCTTTCTTC
Protein sequenceShow/hide protein sequence
MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHS
QSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES