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Carg22730 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22730
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCRIB domain-containing protein RIC4
Genome locationCarg_Chr11:5054215..5055550
RNA-Seq ExpressionCarg22730
SyntenyCarg22730
Gene Ontology termsNA
InterPro domainsIPR000095 - CRIB domain
IPR044509 - CRIB domain-containing protein RIC2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588282.1 CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. sororia]2.6e-8898.24Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM
        MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEM
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM

Query:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
Subjt:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

KAG7022201.1 CRIB domain-containing protein RIC4 [Cucurbita argyrosperma subsp. argyrosperma]6.3e-90100Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVG
        MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVG
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVG

Query:  CPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        CPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
Subjt:  CPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

XP_022933781.1 CRIB domain-containing protein RIC4 [Cucurbita moschata]9.4e-8697.06Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM
        MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEM
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM

Query:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELDHHLSNPNVLPHSI
Subjt:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

XP_023006430.1 CRIB domain-containing protein RIC4 [Cucurbita maxima]4.3e-8395.29Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM
        MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKN QRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEM
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM

Query:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELD HLSN NVLPHSI
Subjt:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

XP_023520680.1 CRIB domain-containing protein RIC4 [Cucurbita pepo subsp. pepo]3.6e-8596.47Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM
        MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFT LAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEM
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM

Query:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELDHHLSNPNVLPHSI
Subjt:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

TrEMBL top hitse value%identityAlignment
A0A0A0LY31 CRIB domain-containing protein2.5e-5266.11Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK
        MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SSEKD         E +LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVYK
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK

Query:  EEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EEME    EME+G PTDVKH+THIGCDATT  +D  N FI WETLLAS         SW + + +L +    PN+L HSI
Subjt:  EEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

A0A1S3B8Q2 CRIB domain-containing protein RIC4 isoform X12.8e-5165.19Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRS-SEKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVY
        MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP S  EKD         E  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVY
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRS-SEKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVY

Query:  KEEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        KEEME    EME+G PTDVKH+THIGCDAT  S+D  N FI WETLLAS         SW + + +L +    PN+L HSI
Subjt:  KEEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

A0A1S3B9E6 CRIB domain-containing protein RIC4 isoform X23.9e-5366.11Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK
        MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SSEKD         E  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVYK
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK

Query:  EEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EEME    EME+G PTDVKH+THIGCDAT  S+D  N FI WETLLAS         SW + + +L +    PN+L HSI
Subjt:  EEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

A0A6J1F000 CRIB domain-containing protein RIC44.5e-8697.06Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM
        MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEM
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM

Query:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELDHHLSNPNVLPHSI
Subjt:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

A0A6J1L039 CRIB domain-containing protein RIC42.1e-8395.29Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM
        MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKN QRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEM
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEM

Query:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
        EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELD HLSN NVLPHSI
Subjt:  EVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

SwissProt top hitse value%identityAlignment
Q1G3K8 CRIB domain-containing protein RIC79.3e-0448Show/hide
Query:  LYKGFKNFSQLFVYK-EEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNP
        L KG +  SQ+F  + E+ EEM++G PTDVKH+ HIG D    SD+   P
Subjt:  LYKGFKNFSQLFVYK-EEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNP

Q1G3Y0 CRIB domain-containing protein RIC93.8e-0555.32Show/hide
Query:  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS
        F  LY K FK FS +F  +EE EEME+G PTDV+H++HIG D+++ S
Subjt:  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS

Q8GYU0 CRIB domain-containing protein RIC21.1e-0748.44Show/hide
Query:  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDPNNPF
        NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ ++ F
Subjt:  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDPNNPF

Q9FFD5 CRIB domain-containing protein RIC42.2e-2140.49Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE----
        MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S     E++E   E+++KN  +F A++KP I +G +R++K FK  SQLF  K+E +E    
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE----

Query:  --MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHL
          ME+G PT+VKH++HIG ++   +     P   WE L+   L +  +S+       E++ HL
Subjt:  --MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHL

Q9M0Y9 CRIB domain-containing protein RIC102.6e-0651.22Show/hide
Query:  LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT
        +YKGFK  SQ+F  ++E +E+E+G PTDVKH+ HIG + ++
Subjt:  LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT

Arabidopsis top hitse value%identityAlignment
AT1G27380.1 ROP-interactive CRIB motif-containing protein 27.6e-0948.44Show/hide
Query:  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDPNNPF
        NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ ++ F
Subjt:  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDPNNPF

AT1G27380.2 ROP-interactive CRIB motif-containing protein 27.6e-0948.44Show/hide
Query:  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDPNNPF
        NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ ++ F
Subjt:  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDPNNPF

AT1G61795.1 PAK-box/P21-Rho-binding family protein2.7e-0655.32Show/hide
Query:  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS
        F  LY K FK FS +F  +EE EEME+G PTDV+H++HIG D+++ S
Subjt:  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS

AT4G04900.1 ROP-interactive CRIB motif-containing protein 101.9e-0751.22Show/hide
Query:  LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT
        +YKGFK  SQ+F  ++E +E+E+G PTDVKH+ HIG + ++
Subjt:  LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT

AT5G16490.1 ROP-interactive CRIB motif-containing protein 41.6e-2240.49Show/hide
Query:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE----
        MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S     E++E   E+++KN  +F A++KP I +G +R++K FK  SQLF  K+E +E    
Subjt:  MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE----

Query:  --MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHL
          ME+G PT+VKH++HIG ++   +     P   WE L+   L +  +S+       E++ HL
Subjt:  --MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGA
CCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGT
TTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCAC
ATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGAC
CGAACTCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGA
mRNA sequenceShow/hide mRNA sequence
GAACAACAATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAA
CCCACCGACCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGG
AGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATT
TGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGT
TCTTGGACCGAACTCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGAAAATCAAAAACATATGTTAAAAAAGCTCGTGTTGATTC
GATGTAAAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTTATTCGTTCATAATTGCTATAAGGAATGTTGGGGCCTTAAGGTAATGGATTAGA
Protein sequenceShow/hide protein sequence
MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTH
IGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI