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Carg22752 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22752
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like
Genome locationCarg_Chr18:150505..151544
RNA-Seq ExpressionCarg22752
SyntenyCarg22752
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019377 - NADH-ubiquinone oxidoreductase, subunit 10
IPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137450.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia]9.5e-5293.33Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
          E+E
Subjt:  AVEAE

XP_022924082.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata]4.5e-5497.14Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        +VE+E
Subjt:  AVEAE

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]2.4e-55100Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        AVEAE
Subjt:  AVEAE

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]5.4e-5599.05Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        AVEAE
Subjt:  AVEAE

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]1.3e-5396.19Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        A E+E
Subjt:  AVEAE

TrEMBL top hitse value%identityAlignment
A0A6J1C6P3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B4.6e-5293.33Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
          E+E
Subjt:  AVEAE

A0A6J1E7Z3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B2.2e-5497.14Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        +VE+E
Subjt:  AVEAE

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like1.2e-55100Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        AVEAE
Subjt:  AVEAE

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like2.6e-5599.05Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        AVEAE
Subjt:  AVEAE

A0A6J1KJX6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B2.2e-5497.14Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVE

Query:  AVEAE
        +VE+E
Subjt:  AVEAE

SwissProt top hitse value%identityAlignment
Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial1.5e-0740.62Show/hide
Query:  PDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL
        P  FD    Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL+KC HL ++YL
Subjt:  PDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B6.2e-4682.08Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EAVEAE
        EAVEAE
Subjt:  EAVEAE

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A1.7e-4379.81Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EAVE
         AVE
Subjt:  EAVE

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS61.2e-4479.81Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EAVE
         AVE
Subjt:  EAVE

AT3G18410.1 Complex I subunit NDUFS64.4e-4782.08Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EAVEAE
        EAVEAE
Subjt:  EAVEAE

AT3G18410.2 Complex I subunit NDUFS64.4e-4782.08Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKV

Query:  EAVEAE
        EAVEAE
Subjt:  EAVEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCACCACCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGGGAACATATTGT
GAGAGAGAAATGGATCGAAATCGAAAAGGCGAAGATACTGAGGGAAAAACTAAGATGGTGCTACCGCATCGAAGGAGTCAACCATCTTCAGAAATGCCGCCACCTTGTTC
AGCAATACCTTGATTCCACTCGCGGCATCGGTTGGGGCAAGGATGGACGCCACCCATCTCTTCATGGTCCTAAAGTGGAGGCGGTCGAAGCTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCACCACCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGGGAACATATTGT
GAGAGAGAAATGGATCGAAATCGAAAAGGCGAAGATACTGAGGGAAAAACTAAGATGGTGCTACCGCATCGAAGGAGTCAACCATCTTCAGAAATGCCGCCACCTTGTTC
AGCAATACCTTGATTCCACTCGCGGCATCGGTTGGGGCAAGGATGGACGCCACCCATCTCTTCATGGTCCTAAAGTGGAGGCGGTCGAAGCTGAGTAAATTTCTGGGAGG
AATAACGGTGAGTTTAAATGTTCCTAAGTTGTTAGGTTATTACTTGGTCTTACTGATTATCAAACTTTATTTGTTTCAGAGATTGAATAAAAGAACGATGAATATTAGCC
CTTTATTTTATTTCGTGTACTGCTACGAGGGGTGTAAAGAATTTTGAACTCAGATCAATGGTCAATAATTCCTTTTAATTTCCATTTCTATGTTGTTTGAGAACTTTGTA
GCAATTTACAGTAAGGTTTCCTAAAATTTTTCTCACTAGTGGTTTGATTTTGAGAATGATTGAATTTTTTTTTCACAAGGCATTCAATCATAGTTCTTTCAAGCGTATGT
ATAAGACCTGACATTAACAGTGTGATGGGTGGGGGTGGGGGCCGTTGAAGCTGTATATACCTTTGTTGATGTTGTCTCATAAT
Protein sequenceShow/hide protein sequence
MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEAVEAE