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Carg22807 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22807
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDET1- and DDB1-associated protein 1
Genome locationCarg_Chr19:5459597..5462418
RNA-Seq ExpressionCarg22807
SyntenyCarg22807
Gene Ontology termsGO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
InterPro domainsIPR003034 - SAP domain
IPR018276 - DET1- and DDB1-associated protein 1, N-terminal
IPR033575 - DET1- and DDB1-associated protein 1
IPR036361 - SAP domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011554.1 hypothetical protein SDJN02_26460, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-66100Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
        MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS

Query:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRKA
        RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRKA
Subjt:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRKA

XP_022952320.1 uncharacterized protein LOC111455033 isoform X1 [Cucurbita moschata]6.8e-6496.08Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
        MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS

Query:  RAKRAVQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        RAKRAVQVRSTK      GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
Subjt:  RAKRAVQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

XP_022952321.1 uncharacterized protein LOC111455033 isoform X2 [Cucurbita moschata]7.3e-66100Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
        MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS

Query:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
Subjt:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

XP_023553646.1 uncharacterized protein LOC111811137 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-6195.27Show/hide
Query:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
        +SSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
Subjt:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA

Query:  VQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        VQVRSTK      GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
Subjt:  VQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

XP_023553647.1 uncharacterized protein LOC111811137 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-6399.3Show/hide
Query:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
        +SSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
Subjt:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA

Query:  VQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        VQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
Subjt:  VQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

TrEMBL top hitse value%identityAlignment
A0A6J1ERA7 DET1- and DDB1-associated protein 17.4e-5688.73Show/hide
Query:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
        +SSASSS+ GASKFLGDLPS GYFSS+VPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISD RAKR 
Subjt:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA

Query:  VQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
         QV S KGAS+S TPSKD Q+LTVERLRALLKA+GLSLKG+K
Subjt:  VQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

A0A6J1GJX4 DET1- and DDB1-associated protein 13.5e-66100Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
        MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS

Query:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
Subjt:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

A0A6J1GLF7 DET1- and DDB1-associated protein 13.3e-6496.08Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
        MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS

Query:  RAKRAVQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        RAKRAVQVRSTK      GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
Subjt:  RAKRAVQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

A0A6J1I9Y6 DET1- and DDB1-associated protein 14.5e-6193.92Show/hide
Query:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
        +SSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
Subjt:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA

Query:  VQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        VQVRSTK      GAS+SATPSK+LQSLTVERLRALLKAKGLSLKGRK
Subjt:  VQVRSTK------GASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

A0A6J1KMN1 DET1- and DDB1-associated protein 17.4e-5688.73Show/hide
Query:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA
        +SSASSS+ GASKFLGDLPS GYFSS+VPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISD RAKR 
Subjt:  SSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRA

Query:  VQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
         QV S KGAS+S TPSKD Q+LTVERLRALLKA+GLSLKG+K
Subjt:  VQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63460.1 SAP domain-containing protein1.8e-3361.44Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----NSSSKDGKGVAAAESSRKRAGEK
        M +S+S  + SS   ASKFL DLPS G+ SSTV SSNPGS+RVYIC HDTSPPE Q IKTNQQNILIRSL+LK     SSSKD KG  A +  +KRA  +
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----NSSSKDGKGVAAAESSRKRAGEK

Query:  ISDSR--AKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
          D R  AKRA      +G SSS T  +D QSLTVE+LRA+LK KGL  KGRK
Subjt:  ISDSR--AKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

AT5G63460.2 SAP domain-containing protein2.3e-3358.94Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----NSSSKDGKGVAAAESSRKRAGEK
        M +S+S  + SS   ASKFL DLPS G+ SSTV SSNPGS+RVYIC HDTSPPE Q IKTNQQNILIRSL+LK     SSSKD KG  A +  +KRA  +
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----NSSSKDGKGVAAAESSRKRAGEK

Query:  ISDSRAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
          D R+       +++  SSS T  +D QSLTVE+LRA+LK KGL  KGRK
Subjt:  ISDSRAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

AT5G63460.3 SAP domain-containing protein2.8e-1540.82Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS
        M +S+S  + SS   ASKFL DLPS G+ SSTV SSNPGS+RVYIC HDTSPPE                                              
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDS

Query:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
                      SSS T  +D QSLTVE+LRA+LK KGL  KGRK
Subjt:  RAKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK

AT5G63460.4 SAP domain-containing protein2.4e-3056.36Show/hide
Query:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPP------------EDQEIKTNQQNILIRSLMLK----NSSSKDGKGVA
        M +S+S  + SS   ASKFL DLPS G+ SSTV SSNPGS+RVYIC HDTSPP            + Q IKTNQQNILIRSL+LK     SSSKD KG  
Subjt:  MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPP------------EDQEIKTNQQNILIRSLMLK----NSSSKDGKGVA

Query:  AAESSRKRAGEKISDSR--AKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK
        A +  +KRA  +  D R  AKRA      +G SSS T  +D QSLTVE+LRA+LK KGL  KGRK
Subjt:  AAESSRKRAGEKISDSR--AKRAVQVRSTKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTCCGCTTCTTCTTCCGCTTCTTCTTCCGCTCCCGGCGCCTCCAAGTTCCTCGGCGACCTTCCTTCCCATGGCTACTTCTCCTCCACCGTTCCCTCCTCCAA
TCCGGGAAGTATGCGAGTCTATATCTGCCTTCATGATACCTCACCCCCAGAGGATCAAGAAATAAAGACAAACCAGCAGAATATACTTATTAGATCTTTAATGCTTAAAA
ATTCCAGTTCAAAGGATGGAAAGGGAGTAGCTGCAGCCGAGTCTTCTCGAAAGAGGGCTGGTGAAAAAATTTCAGATAGCAGAGCAAAGAGGGCTGTACAAGTACGTTCA
ACCAAAGGAGCATCGAGCAGTGCAACACCGAGTAAGGATCTACAGAGTTTGACCGTAGAGAGGCTGCGTGCCCTTCTCAAGGCCAAAGGCCTTTCACTCAAAGGAAGGAA
GGCA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTTCCGCTTCTTCTTCCGCTTCTTCTTCCGCTCCCGGCGCCTCCAAGTTCCTCGGCGACCTTCCTTCCCATGGCTACTTCTCCTCCACCGTTCCCTCCTCCAA
TCCGGGAAGTATGCGAGTCTATATCTGCCTTCATGATACCTCACCCCCAGAGGATCAAGAAATAAAGACAAACCAGCAGAATATACTTATTAGATCTTTAATGCTTAAAA
ATTCCAGTTCAAAGGATGGAAAGGGAGTAGCTGCAGCCGAGTCTTCTCGAAAGAGGGCTGGTGAAAAAATTTCAGATAGCAGAGCAAAGAGGGCTGTACAAGTACGTTCA
ACCAAAGGAGCATCGAGCAGTGCAACACCGAGTAAGGATCTACAGAGTTTGACCGTAGAGAGGCTGCGTGCCCTTCTCAAGGCCAAAGGCCTTTCACTCAAAGGAAGGAA
GGCA
Protein sequenceShow/hide protein sequence
MASSASSSASSSAPGASKFLGDLPSHGYFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDSRAKRAVQVRS
TKGASSSATPSKDLQSLTVERLRALLKAKGLSLKGRKA