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Carg22845 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22845
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein-like protein
Genome locationCarg_Chr15:394652..395134
RNA-Seq ExpressionCarg22845
SyntenyCarg22845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939119.1 uncharacterized protein LOC111445119 [Cucurbita moschata]7.4e-80100Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_022993370.1 uncharacterized protein LOC111489414 [Cucurbita maxima]2.1e-7999.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]7.6e-6990Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV G PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD SADPQDV DDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQE LLT  N SAAGIGT S TRRSLRPIS TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_023551541.1 uncharacterized protein LOC111809331 [Cucurbita pepo subsp. pepo]2.1e-7999.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANT AAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]6.9e-7090Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SP ASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSAD QDVDDDDDD D MIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEE+E  LT ANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

TrEMBL top hitse value%identityAlignment
A0A6J1BYN1 uncharacterized protein LOC1110064617.7e-6788.12Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQC VAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDV DD++DD+NMIPEKN+KEVRARRKLKDLFVSSPP +
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQE LLT +NTSAAGIGT S TRRSLRPIS+TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1FG66 uncharacterized protein LOC1114451193.6e-80100Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1H7N8 uncharacterized protein LOC1114609051.1e-6889.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV G PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD SADPQDV DDDDDD+NMIPEKNDKEV+ARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQE LLT  N SAAGIGT S TRRSLRPIS TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1JSX9 uncharacterized protein LOC1114875518.2e-6990Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV G PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD SADPQDV DDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        D VSDRRIEEQE LLT  NTSAAGIGT S TRRSLRPIS TFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

A0A6J1JYC4 uncharacterized protein LOC1114894141.0e-7999.38Show/hide
Query:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
        DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
Subjt:  DKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown6.3e-2143.43Show/hide
Query:  TLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDK--EVRARRKLKDLFVSSPPL
        +L KFKLLA+ C+      +SPT SPV HL  RRRKTLR+LL R +DR R P   N+ D                +K DK  ++R+ RKL DLFVSSPP 
Subjt:  TLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDK--EVRARRKLKDLFVSSPPL

Query:  E--------DKVSDRRIEEQEALLTTANTSAAGIGTPSITRR-----SLRPISA-TFRYRFLRRAWRPVLVTIPE
        E        DK +   +E +  +     ++ AG G     RR     S+RP+S+ T R R LRR+WRPVLVTIPE
Subjt:  E--------DKVSDRRIEEQEALLTTANTSAAGIGTPSITRR-----SLRPISA-TFRYRFLRRAWRPVLVTIPE

AT1G68430.1 unknown protein3.3e-0935.5Show/hide
Query:  MATLHKFKLLASQCAVAG-CPTQSPT--ASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSP
        MATL +FK L +QC VA   PT+SP+   SP+  L RR++ TL+MLL+ A   R   Q                   +   + K+V A RKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAG-CPTQSPT--ASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSP

Query:  PLEDKVSD------RRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE
          E++  +      +  EE  A +     +A+ +   S       P+   F  R L+RAWRP L TI E
Subjt:  PLEDKVSD------RRIEEQEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE

AT5G16200.1 50S ribosomal protein-related8.0e-1639.29Show/hide
Query:  MATLHKFKLLAS----QCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVS
        ++ LHKFKL A+    + + AG PT SPT SPVF+L  RRRKTLRML ++ +D RR   +      Q +++  + D N   +K       RRKL++L V+
Subjt:  MATLHKFKLLAS----QCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNR-ADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVS

Query:  --SPPLEDKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISA-TFRYRFLRRAWRPVLVTIPE
          SPP + +     I E+ + ++  N ++ G G     RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  --SPPLEDKVSDRRIEEQEALLTTANTSAAGIGTPSITRRSLRPISA-TFRYRFLRRAWRPVLVTIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTTGCCCTACTCAAAGCCCCACTGCTAGCCCCGTCTTTCACCTCCGCCGTCGCCGACG
CAAAACCCTAAGAATGCTCCTCAATCGCGCCGATCGCCGCCGATTTCCCTACCAAGATAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACGACAATA
TGATTCCGGAGAAAAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCACTCGAGGATAAGGTTTCCGACAGGAGAATCGAAGAA
CAGGAAGCATTATTAACGACGGCCAACACCAGCGCCGCTGGAATCGGTACGCCCTCCATCACTCGCCGCTCTCTAAGGCCGATATCGGCGACATTTCGTTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTCACCATTCCCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTTGCCCTACTCAAAGCCCCACTGCTAGCCCCGTCTTTCACCTCCGCCGTCGCCGACG
CAAAACCCTAAGAATGCTCCTCAATCGCGCCGATCGCCGCCGATTTCCCTACCAAGATAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACGACAATA
TGATTCCGGAGAAAAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCACTCGAGGATAAGGTTTCCGACAGGAGAATCGAAGAA
CAGGAAGCATTATTAACGACGGCCAACACCAGCGCCGCTGGAATCGGTACGCCCTCCATCACTCGCCGCTCTCTAAGGCCGATATCGGCGACATTTCGTTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTGCTCGTCACCATTCCCGAATAG
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSADPQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEE
QEALLTTANTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE