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Carg22847 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22847
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 6-like
Genome locationCarg_Chr15:386143..386625
RNA-Seq ExpressionCarg22847
SyntenyCarg22847
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578343.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]4.8e-8799.38Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ
        MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVP+
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ

Query:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
        PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Subjt:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

XP_022939247.1 zinc finger protein 6-like [Cucurbita moschata]1.3e-8496.88Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ
        MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLH+ NWLSSSF PQ
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ

Query:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
        PPS P QAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Subjt:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

XP_022993371.1 zinc finger protein 6-like [Cucurbita maxima]7.6e-8597.5Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ
        MANSQLKLFGFNISE H SVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHV+NWLSSSFVPQ
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ

Query:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
        PPSTPLQAAGLHAMSRP LSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Subjt:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

XP_023550962.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]1.6e-87100Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ
        MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ

Query:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
        PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Subjt:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

XP_038886238.1 zinc finger protein 6-like [Benincasa hispida]7.4e-5671.08Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPPPA-ELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVP
        M  S+LKLFGFNIS++ K+VSN T+PPPA E PES  PHAPKFECQYCCR FSNSQALGGHQNAHREER+LLK AQ+KSCH NY T LHVQNWLSSSF P
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPPPA-ELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVP

Query:  QP-----PSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
         P        P  A  ++AMSRPLLSQ+V RQAG +TG +G VGDE V G  LGLDLQLSLGP KP
Subjt:  QP-----PSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

TrEMBL top hitse value%identityAlignment
A0A0A0LQ31 C2H2-type domain-containing protein2.0e-2267.06Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPP-PAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYF
        ++NS LKLFGF+IS+++K VSNF EPP   E PES     PKFEC+YCCR FSNSQALGGHQNAH+EER+LLK  QIK    NYF
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPP-PAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYF

A0A6J1FG99 zinc finger protein 6-like6.3e-8596.88Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ
        MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLH+ NWLSSSF PQ
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ

Query:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
        PPS P QAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Subjt:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

A0A6J1JW51 zinc finger protein 6-like3.7e-8597.5Show/hide
Query:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ
        MANSQLKLFGFNISE H SVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHV+NWLSSSFVPQ
Subjt:  MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ

Query:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
        PPSTPLQAAGLHAMSRP LSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Subjt:  PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

A0A6P5XKC3 zinc finger protein 6-like1.0e-1840.3Show/hide
Query:  LKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSF-------V
        LKLFGFNI E   + +N +   P+ LPE     A KFECQYCCR FSNSQALGGHQNAH++ER+LLKRAQ+++     F+  H+QN + S+F       V
Subjt:  LKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSF-------V

Query:  PQ--PPSTPLQ-----------------------------AAGLHAM------SRPLLSQDVWRQAGVITGAVGGVGDEAVP--GRGLGLDLQLSLGPSK
        P+  P + PLQ                             AAGL             +S DV   A V+       GD+  P   +GL LDL LSLGP+ 
Subjt:  PQ--PPSTPLQ-----------------------------AAGLHAM------SRPLLSQDVWRQAGVITGAVGGVGDEAVP--GRGLGLDLQLSLGPSK

Query:  P
        P
Subjt:  P

M5X0M0 C2H2-type domain-containing protein1.0e-1838.05Show/hide
Query:  ANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ-
        A++ LKLFGFNISEDH + SN T+   A    S+     K+EC YCCR FSNSQALGGHQNAH++ER++LKRAQ+ +   N  T  H+QN + S+F+ Q 
Subjt:  ANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQ-

Query:  ------------PPSTPL-------------QAAGLHAMSRPLLSQDVWRQAGV--------------------ITGAVGGVGDEA--VPGRGLGLDLQL
                    PP +P              + A L       L + V+R+AG+                    + G  G   DE      +GLGL+L L
Subjt:  ------------PPSTPL-------------QAAGLHAMSRPLLSQDVWRQAGV--------------------ITGAVGGVGDEA--VPGRGLGLDLQL

Query:  SLGPS
        SLGP+
Subjt:  SLGPS

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 83.0e-0742.86Show/hide
Query:  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSC--HLNYFTPLHVQNWLSSSFVPQPPSTPLQA
        +FEC YC R F  SQALGGHQNAH+ ER+  KR  + S   H     P H+  +L++      PS   +A
Subjt:  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSC--HLNYFTPLHVQNWLSSSFVPQPPSTPLQA

Q39264 Zinc finger protein 57.8e-0835.29Show/hide
Query:  ANSQLKLFGFNISEDHKSVSNFT-EPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKS--CHLNYFTPLHVQNWLSSSFV
        ++  +KLFGF +    ++    T E   +    +      + ECQYC + F+NSQALGGHQNAH++ER   KR Q+++    + Y+   H Q  +++SF 
Subjt:  ANSQLKLFGFNISEDHKSVSNFT-EPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKS--CHLNYFTPLHVQNWLSSSFV

Query:  PQ
         Q
Subjt:  PQ

Q39265 Zinc finger protein 64.6e-1642.86Show/hide
Query:  SQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSC-----HLNYFTPLHVQNWLSSSFV
        S LKLFG N+ E     +  +EP P     S    + K+ECQYCCR F+NSQALGGHQNAH++ER+LLKRAQ+ +      H N+       N L S+F 
Subjt:  SQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSC-----HLNYFTPLHVQNWLSSSFV

Query:  PQPPSTPLQAAGLHAMSRPLLSQDVW
        P P          H M  P  S   W
Subjt:  PQPPSTPLQAAGLHAMSRPLLSQDVW

Q9C9H1 Zinc finger protein GIS35.8e-1145.88Show/hide
Query:  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCH--------------------LNYFTPLHVQNWLSSSFVPQPPSTP
        K+ECQYCCR F NSQALGGHQNAH++ER+ LKRAQ+++                      ++ F P    + LSSS VPQP   P
Subjt:  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCH--------------------LNYFTPLHVQNWLSSSFVPQPPSTP

Q9FG05 Zinc finger protein GIS21.3e-0737.8Show/hide
Query:  LKLFGFNISEDH---KSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYF
        ++LFGF     H   +S  N+ E   +   +++     +F+C YC R F  SQALGGHQNAH+ ER+  KR  + S    +F
Subjt:  LKLFGFNISEDH---KSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYF

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 55.5e-0935.29Show/hide
Query:  ANSQLKLFGFNISEDHKSVSNFT-EPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKS--CHLNYFTPLHVQNWLSSSFV
        ++  +KLFGF +    ++    T E   +    +      + ECQYC + F+NSQALGGHQNAH++ER   KR Q+++    + Y+   H Q  +++SF 
Subjt:  ANSQLKLFGFNISEDHKSVSNFT-EPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKS--CHLNYFTPLHVQNWLSSSFV

Query:  PQ
         Q
Subjt:  PQ

AT1G67030.1 zinc finger protein 63.2e-1742.86Show/hide
Query:  SQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSC-----HLNYFTPLHVQNWLSSSFV
        S LKLFG N+ E     +  +EP P     S    + K+ECQYCCR F+NSQALGGHQNAH++ER+LLKRAQ+ +      H N+       N L S+F 
Subjt:  SQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSC-----HLNYFTPLHVQNWLSSSFV

Query:  PQPPSTPLQAAGLHAMSRPLLSQDVW
        P P          H M  P  S   W
Subjt:  PQPPSTPLQAAGLHAMSRPLLSQDVW

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein4.1e-1245.88Show/hide
Query:  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCH--------------------LNYFTPLHVQNWLSSSFVPQPPSTP
        K+ECQYCCR F NSQALGGHQNAH++ER+ LKRAQ+++                      ++ F P    + LSSS VPQP   P
Subjt:  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCH--------------------LNYFTPLHVQNWLSSSFVPQPPSTP

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-0836.21Show/hide
Query:  FECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSS-SFVPQPPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDE
        ++C  C RGF+N QALGGH N HR ER     +   S    +  PL  Q+  SS +F   PP  P   + LH  S+P ++     Q    + +  G G  
Subjt:  FECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSS-SFVPQPPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDE

Query:  AVPGRGLGLDLQLSLG
        A   +G   DL LSLG
Subjt:  AVPGRGLGLDLQLSLG

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein9.5e-0937.8Show/hide
Query:  LKLFGFNISEDH---KSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYF
        ++LFGF     H   +S  N+ E   +   +++     +F+C YC R F  SQALGGHQNAH+ ER+  KR  + S    +F
Subjt:  LKLFGFNISEDH---KSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACTGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCC
CCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGACGGCTTTTGAAGAGGG
CTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGG
CTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTT
GGGCCTGGATTTGCAACTTAGTCTTGGGCCTAGTAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACTGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCC
CCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGACGGCTTTTGAAGAGGG
CTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGG
CTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTT
GGGCCTGGATTTGCAACTTAGTCTTGGGCCTAGTAAGCCTTGA
Protein sequenceShow/hide protein sequence
MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAG
LHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP