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Carg22853 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22853
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:364023..364900
RNA-Seq ExpressionCarg22853
SyntenyCarg22853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578339.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-13100Show/hide
Query:  FLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRR
        FLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRR
Subjt:  FLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRR
KAG7015916.1 hypothetical protein SDJN02_21020, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-42100Show/hide
Query:  MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRRLLNAQFERDDLKL
        MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRRLLNAQFERDDLKL
Subjt:  MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRRLLNAQFERDDLKL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGCGGGCGGGCGGGCGGGCGGGCAGGGCCACGGACTTCCCGCTTCTCTCCGGCTTTCTTTTTTTTCTTTTCGCTTTCTTTCTTGCGAACTCCTCCGGCGTTTCT
TCTCAATTCGAGTGCCTTTAGATCCTCCAAGGTTGTTCGTCACTCCGTTCTCGTCAAGAACGATCCATTTCTGGATGCTGGATTCTGGATTCGTTTTTGCCATCCCAGAC
GGCTCTTGAATGCTCAATTTGAAAGGGACGACTTAAAACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGCGGGCGGGCGGGCGGGCGGGCAGGGCCACGGACTTCCCGCTTCTCTCCGGCTTTCTTTTTTTTCTTTTCGCTTTCTTTCTTGCGAACTCCTCCGGCGTTTCT
TCTCAATTCGAGTGCCTTTAGATCCTCCAAGGTTGTTCGTCACTCCGTTCTCGTCAAGAACGATCCATTTCTGGATGCTGGATTCTGGATTCGTTTTTGCCATCCCAGAC
GGCTCTTGAATGCTCAATTTGAAAGGGACGACTTAAAACTGTAA
Protein sequenceShow/hide protein sequence
MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRRLLNAQFERDDLKL