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Carg22865 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22865
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:306992..310002
RNA-Seq ExpressionCarg22865
SyntenyCarg22865
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578327.1 hypothetical protein SDJN03_22775, partial [Cucurbita argyrosperma subsp. sororia]5.6e-3593.26Show/hide
Query:  LGQSVARIVLILAVGDVSSSTTAAQPQLCTLDFDSLCEQFATKLPQISGMQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
        LGQSVARIVLILAVGDVSSSTTAAQPQLCTLDFDSLCEQFATKLPQISGM GKSLVSPISTVDSVTRLCFSTPCIGTAKSEAV     F
Subjt:  LGQSVARIVLILAVGDVSSSTTAAQPQLCTLDFDSLCEQFATKLPQISGMQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
KAG7015905.1 hypothetical protein SDJN02_21008, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-60100Show/hide
Query:  MLILPKKLKRKRKERSGGGKHGYRLQAKDKNLGQSVARIVLILAVGDVSSSTTAAQPQLCTLDFDSLCEQFATKLPQISGMQGKSLVSPISTVDSVTRLC
        MLILPKKLKRKRKERSGGGKHGYRLQAKDKNLGQSVARIVLILAVGDVSSSTTAAQPQLCTLDFDSLCEQFATKLPQISGMQGKSLVSPISTVDSVTRLC
Subjt:  MLILPKKLKRKRKERSGGGKHGYRLQAKDKNLGQSVARIVLILAVGDVSSSTTAAQPQLCTLDFDSLCEQFATKLPQISGMQGKSLVSPISTVDSVTRLC

Query:  FSTPCIGTAKSEAVLFKCEFLLSAC
        FSTPCIGTAKSEAVLFKCEFLLSAC
Subjt:  FSTPCIGTAKSEAVLFKCEFLLSAC
XP_022938853.1 uncharacterized protein LOC111444935 [Cucurbita moschata]1.3e-0785Show/hide
Query:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
        M GKSLVSPISTVDSVTRLCFSTPCIGTAKSEAV     F
Subjt:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
XP_022993737.1 uncharacterized protein LOC111489650 [Cucurbita maxima]8.5e-0782.5Show/hide
Query:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
        M GKSLVSPISTVDSVTRLCFSTPCIGTAKS AV     F
Subjt:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
XP_023549996.1 uncharacterized protein LOC111808316 [Cucurbita pepo subsp. pepo]5.0e-0782.5Show/hide
Query:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
        M GKSLVSPISTVDSVTRLCFSTPC GTAKSEAV     F
Subjt:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
TrEMBL top hitse value%identityAlignment
A0A6J1FK31 uncharacterized protein LOC1114449356.3e-0885Show/hide
Query:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
        M GKSLVSPISTVDSVTRLCFSTPCIGTAKSEAV     F
Subjt:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
A0A6J1JTP6 uncharacterized protein LOC1114896504.1e-0782.5Show/hide
Query:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
        M GKSLVSPISTVDSVTRLCFSTPCIGTAKS AV     F
Subjt:  MQGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVLFKCEF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATTCTCCCAAAAAAACTGAAAAGAAAACGAAAAGAAAGGAGCGGCGGAGGCAAACACGGCTATAGGCTGCAAGCAAAGGACAAGAATCTCGGCCAATCTGTGGC
TCGCATCGTCCTAATTCTCGCAGTGGGTGACGTTTCTTCTTCAACCACCGCTGCACAACCACAACTCTGTACGCTTGACTTTGATTCCCTCTGCGAGCAATTCGCCACCA
AGCTCCCTCAAATTTCAGGGATGCAAGGAAAATCATTGGTATCTCCCATATCAACAGTTGATTCTGTAACTCGTCTCTGCTTTTCTACTCCCTGCATTGGCACCGCCAAA
TCAGAAGCCGTATTGTTCAAATGTGAGTTTCTCCTATCAGCCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATTCTCCCAAAAAAACTGAAAAGAAAACGAAAAGAAAGGAGCGGCGGAGGCAAACACGGCTATAGGCTGCAAGCAAAGGACAAGAATCTCGGCCAATCTGTGGC
TCGCATCGTCCTAATTCTCGCAGTGGGTGACGTTTCTTCTTCAACCACCGCTGCACAACCACAACTCTGTACGCTTGACTTTGATTCCCTCTGCGAGCAATTCGCCACCA
AGCTCCCTCAAATTTCAGGGATGCAAGGAAAATCATTGGTATCTCCCATATCAACAGTTGATTCTGTAACTCGTCTCTGCTTTTCTACTCCCTGCATTGGCACCGCCAAA
TCAGAAGCCGTATTGTTCAAATGTGAGTTTCTCCTATCAGCCTGCTAAGTATATGATAATGGATGTGAGGAGACAAAGTCCCTATCCGAGGAAGTGGGAAATCCATTCAA
CTGCTCAAGTCGAAAGCTTGGTATTAAGTGATGAGGATAAGAAGACATGGGAAGCTTGTCGGCAAGCTCTGTCCATGTTCAGCTTTAGTGATGAGGAGCAAGATAAGATG
CTCGGAAAGGCGTTTGGCCACATTCATTCACCCTACTGGGGCGAAGACAGAAAGAAGGAAGTTCCTAATATTGATACCGTAAAGGAGATACTGGAATATCTGAGGACACT
TGGGCTCTCTAATGATGATCTCTCTAAGCTGCTCAAAAAATTCCCTGAAGTTCTTGGCTGCAATCTTGAGCAGGAGCTGAAAACCAACGTACAATTGTTGGAGAAGGAGT
GGGGAATTCAAGGCAAATCACTAAGGAGTCTTCTTCTGCGTAATCCCAAGGTATTGGGTTACAACGTTGATTGTAAAGGAGACTGCATTGCAAAATGCACCAGATGCTGG
GTTCGATTCTAATCACACTTTCTTTTACACAATTTCTTATACCAATAATAACTTATGCA
Protein sequenceShow/hide protein sequence
MLILPKKLKRKRKERSGGGKHGYRLQAKDKNLGQSVARIVLILAVGDVSSSTTAAQPQLCTLDFDSLCEQFATKLPQISGMQGKSLVSPISTVDSVTRLCFSTPCIGTAK
SEAVLFKCEFLLSAC