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Carg22893 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22893
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytotoxic and regulatory T-cell molecule
Genome locationCarg_Chr11:5320321..5320983
RNA-Seq ExpressionCarg22893
SyntenyCarg22893
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5536614.1 hypothetical protein RHGRI_024138 [Rhododendron griersonianum]1.5e-0753.33Show/hide
Query:  RNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS
        +NA   A  D   HST NHACS A N A+SAC     T  T+  ALATTTGR RKE PNALR  N   F S L +
Subjt:  RNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS

KAG6580964.1 hypothetical protein SDJN03_20966, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1571.64Show/hide
Query:  RNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHN
        R+ NAQ+GAPL AGGH+TTNHACS AK+AA SAC C   T ETK  ALATTTGR RKE PNAL+K N
Subjt:  RNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHN

KAG7017706.1 hypothetical protein SDJN02_19572 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1450.45Show/hide
Query:  MAGNGRGGRNR--------------------------------------NAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGR
        MAGNGRGGR+R                                      NAQ+GAPL AGGH+TTNHACS AK+AA SAC C   T ETK  ALATTTGR
Subjt:  MAGNGRGGRNR--------------------------------------NAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGR

Query:  QRKEGPNALRK
         RKE PNAL+K
Subjt:  QRKEGPNALRK

KAG7022220.1 hypothetical protein SDJN02_15950, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-39100Show/hide
Query:  MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS
        MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS
Subjt:  MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS

XP_022933447.1 uncharacterized protein LOC111440860 isoform X1 [Cucurbita moschata]2.6e-39100Show/hide
Query:  MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS
        MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS
Subjt:  MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS

TrEMBL top hitse value%identityAlignment
A0A2P5C8K0 Uncharacterized protein6.2e-0760Show/hide
Query:  NAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNAL
        NA+  A  DA  H+TT+HAC  AKNAA SA  C   TM TK  ALATTTGR R+E P+AL
Subjt:  NAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNAL

A0A2P5F726 Uncharacterized protein1.6e-0761.67Show/hide
Query:  NAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNAL
        NA+  A  DA  H+TTNHAC  AKNAA SA  C   TM TK  ALATTTGR R+E P+AL
Subjt:  NAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNAL

A0A6A2YCB8 F-box protein6.2e-0754.41Show/hide
Query:  RNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNP
        R  NA   A  D    STTNHACS  +NAA  AC C +    T  FALATTTGR RKE PNAL+   P
Subjt:  RNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNP

A0A6A2ZRF0 Putative transcription factor6.2e-0756.25Show/hide
Query:  RNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALR
        R  NA   A  D    STTNHACS  +NAA  AC C +  M T  FAL TTTGR RKE PNAL+
Subjt:  RNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALR

A0A6J1EZT1 uncharacterized protein LOC111440860 isoform X11.2e-39100Show/hide
Query:  MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS
        MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS
Subjt:  MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGCAATGGACGTGGTGGTCGCAACAGGAATGCCCAAGTCGGTGCGCCACTCGATGCGGGAGGACACAGTACCACAAACCATGCATGTTCTTTTGCCAAAAATGC
TGCAGAAAGTGCTTGTGCGTGCCGCCGGGTTACTATGGAAACAAAGGCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGGCCCAAATGCCCTTAGAAAAC
ACAACCCATTTCCATTTCCATCTCTTTTGTGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGCAATGGACGTGGTGGTCGCAACAGGAATGCCCAAGTCGGTGCGCCACTCGATGCGGGAGGACACAGTACCACAAACCATGCATGTTCTTTTGCCAAAAATGC
TGCAGAAAGTGCTTGTGCGTGCCGCCGGGTTACTATGGAAACAAAGGCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGGCCCAAATGCCCTTAGAAAAC
ACAACCCATTTCCATTTCCATCTCTTTTGTGCTCTTGA
Protein sequenceShow/hide protein sequence
MAGNGRGGRNRNAQVGAPLDAGGHSTTNHACSFAKNAAESACACRRVTMETKAFALATTTGRQRKEGPNALRKHNPFPFPSLLCS