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Carg22909 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22909
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthioredoxin H2-like
Genome locationCarg_Chr11:5449943..5451076
RNA-Seq ExpressionCarg22909
SyntenyCarg22909
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0016671 - oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (molecular function)
GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443435.2 PREDICTED: thioredoxin H2 [Cucumis melo]3.1e-6184.72Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVL S IG L+S WFGP TA+AEAASSEPSSV SFHSSARW+LHF+SVQE+SKLMVIDFSATWCGPCRLMEP+FNAMAS YTDVEF KIDVDEL+DVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
         FGVQAMPTFV L+RGKV+DTVVGARKEELEKKI+KHRS SG T
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

XP_022928736.1 thioredoxin H2-like [Cucurbita moschata]2.3e-72100Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
        DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

XP_022971509.1 thioredoxin H2-like [Cucurbita maxima]2.5e-7198.61Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVLFSTIGTL+SKWFGPS ASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
        DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

XP_023531185.1 thioredoxin H2-like isoform X1 [Cucurbita pepo subsp. pepo]6.9e-6185.81Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPC-----------RLMEPSFNAMASTYTDVEFIK
        MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKL+ I+F+ +                RLMEPSFNAMASTYTDVEFIK
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPC-----------RLMEPSFNAMASTYTDVEFIK

Query:  IDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
        IDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
Subjt:  IDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

XP_038903635.1 thioredoxin H2 [Benincasa hispida]9.6e-6388.73Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVL S IG L+S WFGP TASAEAASSEPSSV SFHSSARW+LH++S QESSKLMVIDFSATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASG
         FGVQAMPTFVLLR+GKV+DTVVGARKEELEKKIQKHRSASG
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASG

TrEMBL top hitse value%identityAlignment
A0A1S3B804 thioredoxin H21.5e-6184.72Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVL S IG L+S WFGP TA+AEAASSEPSSV SFHSSARW+LHF+SVQE+SKLMVIDFSATWCGPCRLMEP+FNAMAS YTDVEF KIDVDEL+DVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
         FGVQAMPTFV L+RGKV+DTVVGARKEELEKKI+KHRS SG T
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

A0A5D3DQ11 Thioredoxin H21.5e-6184.72Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVL S IG L+S WFGP TA+AEAASSEPSSV SFHSSARW+LHF+SVQE+SKLMVIDFSATWCGPCRLMEP+FNAMAS YTDVEF KIDVDEL+DVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
         FGVQAMPTFV L+RGKV+DTVVGARKEELEKKI+KHRS SG T
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

A0A6J1EL53 thioredoxin H2-like1.1e-72100Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
        DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

A0A6J1F1R9 thioredoxin H2-like1.7e-6087.68Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVL S IG L+S WFGPSTA AE ASSEPSSV SFHSSARW+LHF+S +ESSKLMVIDFSATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHR
        +FGVQAMPTF+LLRRGKV+DTVVGARKEELEKKIQKHR
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHR

A0A6J1I8S1 thioredoxin H2-like1.2e-7198.61Show/hide
Query:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
        MGVLFSTIGTL+SKWFGPS ASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ
Subjt:  MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQ

Query:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
        DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
Subjt:  DFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

SwissProt top hitse value%identityAlignment
O64394 Thioredoxin H-type8.3e-2546.22Show/hide
Query:  STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKV
        +TA+A AA+     V S HS  +W +  +    + KL+VIDF+A+WCGPCR+M P F  +A  +    F+K+DVDEL  +A+ F V+AMPTF+ ++ G V
Subjt:  STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKV

Query:  LDTVVGARKEELEKKIQKH
         D VVGA KEEL  K+  H
Subjt:  LDTVVGARKEELEKKIQKH

Q38879 Thioredoxin H26.5e-3855.64Show/hide
Query:  IGTLVSKWFGP-STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQA
        +G  +S  FG    A+A    SEPS V  F SSARW+LHF+ ++ES+KL+V+DFSA+WCGPCR++EP+ +AMA  + DV+F+K+DVDEL DVA++F V A
Subjt:  IGTLVSKWFGP-STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQA

Query:  MPTFVLLRRGKVLDTVVGARKEELEKKIQKHRS
        MPTFVL++RGK ++ ++GA+K+ELEKK+ K R+
Subjt:  MPTFVLLRRGKVLDTVVGARKEELEKKIQKHRS

Q39239 Thioredoxin H42.2e-2548.21Show/hide
Query:  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTY-TDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGA
        ++E   V   H++  W +  D  +ES+KL+VIDF+A+WC PCR++ P FN +A  + +   F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA
Subjt:  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTY-TDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGA

Query:  RKEELEKKIQKH
         KE+L+ KI KH
Subjt:  RKEELEKKIQKH

Q6Z4I3 Thioredoxin H2-11.6e-2850.39Show/hide
Query:  STASAEAASSE---PSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRR
        ST+  + A+ E    S+V + HS A+W   +D+ + ++KL+VIDFSA+WCGPC++MEP F  MA  +TDV F+K+DVDEL++VA+ + V+AMPTFVL R 
Subjt:  STASAEAASSE---PSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRR

Query:  GKVLDTVVGARKEELEKKIQKHRSASGGT
        G+ +  +VGA K+ELEK I   RS+S  T
Subjt:  GKVLDTVVGARKEELEKKIQKHRSASGGT

Q851R5 Thioredoxin H2-21.2e-2647.41Show/hide
Query:  IGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQES-SKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQA
        +G+  S  F P  A+ +   S    V + HS+A W   + + + + +KL+VIDFSATWCGPCR +EP+F  MA  + D  F KIDVDELS+VA+ + V+A
Subjt:  IGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQES-SKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQA

Query:  MPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSAS
        MPTFVL++ GK +  VVGA+K+ELE+K+    S+S
Subjt:  MPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSAS

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein1.5e-2648.21Show/hide
Query:  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTY-TDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGA
        ++E   V   H++  W +  D  +ES+KL+VIDF+A+WC PCR++ P FN +A  + +   F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA
Subjt:  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTY-TDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGA

Query:  RKEELEKKIQKH
         KE+L+ KI KH
Subjt:  RKEELEKKIQKH

AT1G45145.1 thioredoxin H-type 51.0e-2550.48Show/hide
Query:  VSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEK
        V + H+   W        ES KL+VIDF+A+WC PCR + P F  MA  +T+V F KIDVDEL  VAQ+F V+AMPTFV ++ G ++D VVGA K+E+ +
Subjt:  VSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEK

Query:  KIQKH
        K+ KH
Subjt:  KIQKH

AT3G51030.1 thioredoxin H-type 17.7e-2646.85Show/hide
Query:  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR
        +SE   V + H+   W        ES  L+V+DF+A+WCGPCR + P F  +A    +V F+K+D DEL  VA D+ +QAMPTF+ L+ GK+LD VVGA+
Subjt:  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR

Query:  KEELEKKIQKH
        K+EL+  I KH
Subjt:  KEELEKKIQKH

AT5G39950.1 thioredoxin 24.6e-3955.64Show/hide
Query:  IGTLVSKWFGP-STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQA
        +G  +S  FG    A+A    SEPS V  F SSARW+LHF+ ++ES+KL+V+DFSA+WCGPCR++EP+ +AMA  + DV+F+K+DVDEL DVA++F V A
Subjt:  IGTLVSKWFGP-STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQA

Query:  MPTFVLLRRGKVLDTVVGARKEELEKKIQKHRS
        MPTFVL++RGK ++ ++GA+K+ELEKK+ K R+
Subjt:  MPTFVLLRRGKVLDTVVGARKEELEKKIQKHRS

AT5G42980.1 thioredoxin 32.2e-2547.66Show/hide
Query:  VSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEK
        V + H+   W     +  ES KL+VIDF+ATWC PCR + P F  +A  + DV F K+DVDEL+ VA++F VQAMPTF+ ++ G++ +TVVGA KEE+  
Subjt:  VSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEK

Query:  KIQKHRS
         ++KH++
Subjt:  KIQKHRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTCTTTTCTCAACGATCGGCACTCTTGTTTCTAAATGGTTCGGCCCCTCAACGGCGAGTGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTCTTCTTTTCA
TTCGTCGGCTAGATGGAAACTCCACTTCGATTCCGTTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCGGCGACTTGGTGTGGACCTTGTAGGCTGATGGAGCCGT
CCTTCAACGCCATGGCCAGTACATATACTGATGTTGAGTTCATCAAAATCGATGTCGACGAGTTATCTGATGTAGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTT
GTATTGCTGAGGAGAGGGAAAGTGTTGGATACGGTGGTTGGAGCACGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTGGAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTCTTTTCTCAACGATCGGCACTCTTGTTTCTAAATGGTTCGGCCCCTCAACGGCGAGTGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTCTTCTTTTCA
TTCGTCGGCTAGATGGAAACTCCACTTCGATTCCGTTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCGGCGACTTGGTGTGGACCTTGTAGGCTGATGGAGCCGT
CCTTCAACGCCATGGCCAGTACATATACTGATGTTGAGTTCATCAAAATCGATGTCGACGAGTTATCTGATGTAGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTT
GTATTGCTGAGGAGAGGGAAAGTGTTGGATACGGTGGTTGGAGCACGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTGGAACTTAA
Protein sequenceShow/hide protein sequence
MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTF
VLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT