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Carg22937 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22937
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThioredoxin domain-containing protein
Genome locationCarg_Chr11:5662402..5663551
RNA-Seq ExpressionCarg22937
SyntenyCarg22937
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5128850.1 hypothetical protein JHK84_035247 [Glycine max]1.4e-1256.96Show/hide
Query:  MGEQPNPWNILQLEVAKSRHR-------------------------VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP
        MGEQPNPWNILQ +VAKSRHR                         VKLPSA+ALEGQSPS PRKPLHA VTFW    P
Subjt:  MGEQPNPWNILQLEVAKSRHR-------------------------VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP

KAG7022263.1 hypothetical protein SDJN02_15994, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-98100Show/hide
Query:  MGEQPNPWNILQLEVAKSRHRVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRPHCCLTGYAAPEKSNCNGGSLPCRSL
        MGEQPNPWNILQLEVAKSRHRVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRPHCCLTGYAAPEKSNCNGGSLPCRSL
Subjt:  MGEQPNPWNILQLEVAKSRHRVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRPHCCLTGYAAPEKSNCNGGSLPCRSL

Query:  RSQTHCVHDERFFTLDLRAFPIRHDPQLRFPFSISDFIDEYASTSLQLCRLNEFDLIFASFNSNGLIPFI
        RSQTHCVHDERFFTLDLRAFPIRHDPQLRFPFSISDFIDEYASTSLQLCRLNEFDLIFASFNSNGLIPFI
Subjt:  RSQTHCVHDERFFTLDLRAFPIRHDPQLRFPFSISDFIDEYASTSLQLCRLNEFDLIFASFNSNGLIPFI

RYR21282.1 hypothetical protein Ahy_B03g066575 isoform B [Arachis hypogaea]3.5e-1168.52Show/hide
Query:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRP
        VKLPS +ALE QSPS PRK LHAF+TFW    P  NCLP+ VPWPVGPD R  P
Subjt:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRP

TKY46757.1 cell wall-associated hydrolase [Spatholobus suberectus]1.4e-1270.49Show/hide
Query:  MGEQPNPWNILQLEVAKSRH-------RVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP
        MGEQPNPWNILQ +VAKSRH       R KLPSA+ALEGQSPS PRKPLHA VTF     P
Subjt:  MGEQPNPWNILQLEVAKSRH-------RVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP

VVA40906.1 PREDICTED: cell wall-associated hydrolase [Prunus dulcis]2.8e-1370.49Show/hide
Query:  MGEQPNPWNILQLEVAKSRH-------RVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP
        MGEQPNPWNILQ +VAKSRH       R KLPSA+ALEGQSPS PRKPLHA  TFW    P
Subjt:  MGEQPNPWNILQLEVAKSRH-------RVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP

TrEMBL top hitse value%identityAlignment
A0A2N9GA72 Uncharacterized protein2.9e-1176.09Show/hide
Query:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPV
        VKLPSA+ALEGQSPS PRKPLHA VTFW    P  NCLP+ VPWPV
Subjt:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPV

A0A445A4A5 Thioredoxin domain-containing protein1.7e-1168.52Show/hide
Query:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRP
        VKLPS +ALE QSPS PRK LHAF+TFW    P  NCLP+ VPWPVGPD R  P
Subjt:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRP

A0A445A4K1 Thioredoxin domain-containing protein1.7e-1168.52Show/hide
Query:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRP
        VKLPS +ALE QSPS PRK LHAF+TFW    P  NCLP+ VPWPVGPD R  P
Subjt:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRP

A0A5E4GMM3 PREDICTED: cell wall-associated hydrolase1.4e-1370.49Show/hide
Query:  MGEQPNPWNILQLEVAKSRH-------RVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP
        MGEQPNPWNILQ +VAKSRH       R KLPSA+ALEGQSPS PRKPLHA  TFW    P
Subjt:  MGEQPNPWNILQLEVAKSRH-------RVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRP

A0A5N6PW49 Ribosomal_L16 domain-containing protein1.9e-1072.55Show/hide
Query:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTR
        VKLPSA+ALEGQSPS PRKPLHA + F G   P  NCLP+ VPWPV PDTR
Subjt:  VKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAACAGCCCAACCCTTGGAACATACTACAGCTCGAAGTGGCGAAGAGCCGACATCGAGTCAAGCTCCCTTCTGCCTATGCACTCGAGGGCCAATCTCCGTCTTG
CCCAAGGAAACCTTTGCACGCCTTCGTTACCTTTTGGGGAGGCGTACGCCCCATAGGAAACTGTCTACCTAAGATTGTCCCTTGGCCAGTAGGTCCAGACACAAGAACTC
GGCCACATTGCTGTCTGACGGGTTACGCGGCTCCCGAGAAATCCAATTGCAACGGCGGTTCGCTCCCTTGCCGGTCTCTGCGAAGTCAGACTCACTGTGTTCACGACGAA
CGCTTCTTTACATTAGATTTGAGAGCGTTCCCGATTCGCCATGATCCCCAACTTCGTTTTCCTTTCAGCATTTCTGATTTCATCGATGAATATGCGTCAACATCACTTCA
ATTGTGCAGGTTAAACGAATTTGACCTGATTTTCGCTTCGTTCAACAGTAATGGTTTGATTCCTTTCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAACAGCCCAACCCTTGGAACATACTACAGCTCGAAGTGGCGAAGAGCCGACATCGAGTCAAGCTCCCTTCTGCCTATGCACTCGAGGGCCAATCTCCGTCTTG
CCCAAGGAAACCTTTGCACGCCTTCGTTACCTTTTGGGGAGGCGTACGCCCCATAGGAAACTGTCTACCTAAGATTGTCCCTTGGCCAGTAGGTCCAGACACAAGAACTC
GGCCACATTGCTGTCTGACGGGTTACGCGGCTCCCGAGAAATCCAATTGCAACGGCGGTTCGCTCCCTTGCCGGTCTCTGCGAAGTCAGACTCACTGTGTTCACGACGAA
CGCTTCTTTACATTAGATTTGAGAGCGTTCCCGATTCGCCATGATCCCCAACTTCGTTTTCCTTTCAGCATTTCTGATTTCATCGATGAATATGCGTCAACATCACTTCA
ATTGTGCAGGTTAAACGAATTTGACCTGATTTTCGCTTCGTTCAACAGTAATGGTTTGATTCCTTTCATCTGA
Protein sequenceShow/hide protein sequence
MGEQPNPWNILQLEVAKSRHRVKLPSAYALEGQSPSCPRKPLHAFVTFWGGVRPIGNCLPKIVPWPVGPDTRTRPHCCLTGYAAPEKSNCNGGSLPCRSLRSQTHCVHDE
RFFTLDLRAFPIRHDPQLRFPFSISDFIDEYASTSLQLCRLNEFDLIFASFNSNGLIPFI