; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22957 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22957
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCASP-like protein
Genome locationCarg_Chr02:1861983..1864553
RNA-Seq ExpressionCarg22957
SyntenyCarg22957
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006702 - Casparian strip membrane protein domain
IPR045009 - CASP-like protein 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5956091.1 hypothetical protein HYC85_008947 [Camellia sinensis]1.0e-4155.26Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDW------------
        MD VPGSVGT   F+LRLGQT+FSSASLLFMSLG+EFYSYTAFC+LVT+MGLVIPWSFTLALVDGYSVLVKCP RQPGIL  ++VGDW            
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDW------------

Query:  ------------------VSALTSYTGCCLL-DGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITP
                          V  + S+ GC LL D      T   +Q +LP K V +IS  C HG+ VMV    F SFQSL TS L++   P
Subjt:  ------------------VSALTSYTGCCLL-DGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITP

KAG6605099.1 CASP-like protein 5C1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3977.5Show/hide
Query:  PGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCLLDGE
        PGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV +L +      L   
Subjt:  PGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCLLDGE

Query:  CRRHTSSFRQFVLPVKAVQE
         RR  SS   F+  V+  ++
Subjt:  CRRHTSSFRQFVLPVKAVQE

KAG7035099.1 CASP-like protein 5C1 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-82100Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL
        MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL

Query:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITPNL
        LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITPNL
Subjt:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITPNL

XP_022947184.1 CASP-like protein 5C1 [Cucurbita moschata]7.5e-4063.8Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL
        MDVVPGSVGTGGSFSLRLGQT+FSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV +L +    C 
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL

Query:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLL--VMVFVFCFFSFQSLVTSILIVFITPNL
                T+S    +L   +    S +C    +   M F+  F SF S   S+  +++ P+L
Subjt:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLL--VMVFVFCFFSFQSLVTSILIVFITPNL

XP_023007057.1 CASP-like protein 5C1 [Cucurbita maxima]6.8e-4190.91Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC
        MDVVPGSVGTGGSFSLRLGQT+FSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV +L +    C
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC

TrEMBL top hitse value%identityAlignment
A0A0A0LP49 CASP-like protein3.4e-3860.25Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL
        MD VPGSVGTG SFSLRLGQT FSSASLLFMSLG+EFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGIL II+VGDWV +L +    C 
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL

Query:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITPNL
                T+S    +L + +    S +C    +     F F  F S  +S+  +++ P+L
Subjt:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITPNL

A0A4S4EB58 CASP-like protein1.2e-3848.15Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV-----------
        MD VPGSVGT   F+LRLGQT+FSSASLLFMSLG+EFYSYTAFC+LVT+MGLVIPWSFTLALVDGYSVLVKCP RQPGIL  ++VGDW+           
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV-----------

Query:  ---------------------------------------------SALTSYTGCCLL-DGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFF
                                                       + S+ GC LL D      T   +Q +LP K V +IS  C HG+ VMV    F 
Subjt:  ---------------------------------------------SALTSYTGCCLL-DGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFF

Query:  SFQSLVTSILIVFITP
        SFQSL TS L++   P
Subjt:  SFQSLVTSILIVFITP

A0A6J1G621 CASP-like protein3.6e-4063.8Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL
        MDVVPGSVGTGGSFSLRLGQT+FSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV +L +    C 
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCL

Query:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLL--VMVFVFCFFSFQSLVTSILIVFITPNL
                T+S    +L   +    S +C    +   M F+  F SF S   S+  +++ P+L
Subjt:  LDGECRRHTSSFRQFVLPVKAVQEISNICCHGLL--VMVFVFCFFSFQSLVTSILIVFITPNL

A0A6J1KXG7 CASP-like protein3.3e-4190.91Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC
        MDVVPGSVGTGGSFSLRLGQT+FSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV +L +    C
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC

A0A7J7HV30 CASP-like protein5.1e-4255.26Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDW------------
        MD VPGSVGT   F+LRLGQT+FSSASLLFMSLG+EFYSYTAFC+LVT+MGLVIPWSFTLALVDGYSVLVKCP RQPGIL  ++VGDW            
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDW------------

Query:  ------------------VSALTSYTGCCLL-DGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITP
                          V  + S+ GC LL D      T   +Q +LP K V +IS  C HG+ VMV    F SFQSL TS L++   P
Subjt:  ------------------VSALTSYTGCCLL-DGECRRHTSSFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITP

SwissProt top hitse value%identityAlignment
B6U300 CASP-like protein 5C11.4e-2862.77Show/hide
Query:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC
        G+VG+ GS  LR+GQ +FSSASLLFMS+G+EF+SYTAFC+LVT+MGLVIPWS TLA++D YSV V CPLR PG++ I++VGD   ++ S+   C
Subjt:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC

B8BPI2 CASP-like protein 5C18.1e-2966.29Show/hide
Query:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTS
        G+VG+ GS  LR+ Q +FSSASLLFMS+G+EF+SYTAFC+LVT+MGLVIPWS TLA++D YS+LV CPLR PG++ I+++GDWV A+ S
Subjt:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTS

D7LTJ4 CASP-like protein ARALYDRAFT_4854297.3e-2253.54Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC
        M+ VPGS GT  SF+LR GQT+FS+ASL+FM    +FY +T FCYL TVM +V PWS  LAL D YSVLVK   ++  +L+I+  GD+V +  S  G C
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC

Q10EJ2 CASP-like protein 5C19.5e-3067.42Show/hide
Query:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTS
        G+VG+ GS  LR+GQ +FSSASLLFMS+G+EF+SYTAFC+LVT+MGLVIPWS TLA++D YS+LV CPLR PG++ I+++GDWV A+ S
Subjt:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTS

Q3ECT8 CASP-like protein 5C34.3e-2259.3Show/hide
Query:  VPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV
        VPGSVGT  S SLRLGQ + +  SLLFM++G+ FY +TAFCYLVT+M L IPW+ TLA+VD Y V+++ P ++P IL  I +GDWV
Subjt:  VPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV

Arabidopsis top hitse value%identityAlignment
AT1G49405.1 Uncharacterised protein family (UPF0497)3.0e-2359.3Show/hide
Query:  VPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV
        VPGSVGT  S SLRLGQ + +  SLLFM++G+ FY +TAFCYLVT+M L IPW+ TLA+VD Y V+++ P ++P IL  I +GDWV
Subjt:  VPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWV

AT3G23200.1 Uncharacterised protein family (UPF0497)8.9e-1539.36Show/hide
Query:  VPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTG
        +PG+ GT     LR+ Q +F++ S+ +M     F+S+TAFCYL+  MGL + WSF LA++D ++++ K  L  P ++++ +VGDWV++  S  G
Subjt:  VPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTG

AT3G50810.1 Uncharacterised protein family (UPF0497)2.0e-2252.53Show/hide
Query:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC
        M+ VPGS GT  SF+LR GQT+FS+ASL+FM    +FY +T FCYL  VM +V PWS  LAL D YSVLVK   ++  +L+I+  GD+V +  S  G C
Subjt:  MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC

AT4G37235.1 Uncharacterised protein family (UPF0497)2.6e-2258.95Show/hide
Query:  SVGTGGSFSLRLGQTLFSSASLLFMSLG--IEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC
        S GT  SF LRLGQTLFSSASLLFM      +FY+YT FCYLVTVMGLV PWS TLAL++ YS+LVK    Q  ++++I+ GD+V +  S  G C
Subjt:  SVGTGGSFSLRLGQTLFSSASLLFMSLG--IEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC

AT5G02060.1 Uncharacterised protein family (UPF0497)8.9e-1545.74Show/hide
Query:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC
        GS GT     LRLGQ   ++AS+  M    +F +YTAFC+LV  MGL + WSF LA +D Y++  K  LR P +L++  VGDWV+AL +    C
Subjt:  GSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTGGTACCTGGGTCGGTGGGCACCGGCGGCAGTTTCTCTCTAAGACTGGGCCAGACTTTGTTCTCTTCCGCTTCGCTTCTTTTCATGTCTTTGGGTATTGAGTT
CTACAGCTACACTGCTTTCTGCTACCTTGTGACAGTAATGGGTTTGGTCATACCCTGGAGCTTCACCTTAGCATTGGTTGATGGCTATTCAGTTCTCGTAAAATGTCCTC
TTCGACAGCCCGGAATCCTCACGATCATCATCGTCGGAGATTGGGTAAGTGCTCTCACTTCTTACACTGGCTGCTGCTTGCTCGACGGCGAGTGTCGTCGACATACTTCT
TCATTCAGACAGTTCGTATTGCCCGTCAAAGCTGTGCAGGAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTTTGCTTCTTCTCTTTTCAATC
TTTGGTTACTTCCATCCTTATAGTGTTCATAACTCCTAACCTCTAA
mRNA sequenceShow/hide mRNA sequence
CAAAATTTCTGCGGCTGATTTGGCTCTCGAAGCTCTGAGAACGTGCCACCCAAAAACAAGAAACGGCCCCCGGAAGTCTCAATTCCAACGCCCCGCCCTTTTCTGTAACA
CCCATCTCCGGATTCGACCTCTAAACCCCTTTTCACCGGGGAACTCGCCGGATTCATCATCGGGACCAAAATTGAGAATCAAAATAGAGTCCGTTGATTTGGGTGTGAGC
GGGTATGGTGGAGCATTGAGCGATTAAGATGAGTGGTTTTGAGGGGAAGAAGAAATGGGGAATTTGTAGAGTTAGGAATCGCATTCACCGGCGCTGCCATGGACGTGGTA
CCTGGGTCGGTGGGCACCGGCGGCAGTTTCTCTCTAAGACTGGGCCAGACTTTGTTCTCTTCCGCTTCGCTTCTTTTCATGTCTTTGGGTATTGAGTTCTACAGCTACAC
TGCTTTCTGCTACCTTGTGACAGTAATGGGTTTGGTCATACCCTGGAGCTTCACCTTAGCATTGGTTGATGGCTATTCAGTTCTCGTAAAATGTCCTCTTCGACAGCCCG
GAATCCTCACGATCATCATCGTCGGAGATTGGGTAAGTGCTCTCACTTCTTACACTGGCTGCTGCTTGCTCGACGGCGAGTGTCGTCGACATACTTCTTCATTCAGACAG
TTCGTATTGCCCGTCAAAGCTGTGCAGGAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTTTGCTTCTTCTCTTTTCAATCTTTGGTTACTTC
CATCCTTATAGTGTTCATAACTCCTAACCTCTAATTTGCTGAAGCTATGTATCCATAGACTTGTACACTCATTTTGTTCTGAATTAGAAATTTGTACACTTGTTTTGTTC
TCAAGTTGGATGAGATTTTTAGGCGGGTTC
Protein sequenceShow/hide protein sequence
MDVVPGSVGTGGSFSLRLGQTLFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVSALTSYTGCCLLDGECRRHTS
SFRQFVLPVKAVQEISNICCHGLLVMVFVFCFFSFQSLVTSILIVFITPNL