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Carg22988 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22988
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPrefoldin subunit 4
Genome locationCarg_Chr05:10854149..10857113
RNA-Seq ExpressionCarg22988
SyntenyCarg22988
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR016661 - Prefoldin, subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599316.1 putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. sororia]3.8e-9398.88Show/hide
Query:  MREKRDFWGNSEMGYGPNGKKLRGGSNWLVPFPSNRSFLPHFHCERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLED
        MREKRDFWGNSEMGYGPNGKKLRG SNWLVPFPSNRSFLPHFH ERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLED
Subjt:  MREKRDFWGNSEMGYGPNGKKLRGGSNWLVPFPSNRSFLPHFHCERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLED

Query:  ASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD
        ASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD
Subjt:  ASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD

KAG7030312.1 putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-95100Show/hide
Query:  MREKRDFWGNSEMGYGPNGKKLRGGSNWLVPFPSNRSFLPHFHCERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLED
        MREKRDFWGNSEMGYGPNGKKLRGGSNWLVPFPSNRSFLPHFHCERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLED
Subjt:  MREKRDFWGNSEMGYGPNGKKLRGGSNWLVPFPSNRSFLPHFHCERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLED

Query:  ASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD
        ASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD
Subjt:  ASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD

XP_022946140.1 probable prefoldin subunit 4 [Cucurbita moschata]5.5e-60100Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELKKILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

XP_022999107.1 probable prefoldin subunit 4 [Cucurbita maxima]3.6e-5998.41Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELK+ILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

XP_023521156.1 probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo]1.6e-5999.21Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELKKILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

TrEMBL top hitse value%identityAlignment
A0A0A0LFH2 Prefoldin subunit 42.3e-5692.86Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETN+NLEDASNELILSD+D+IRF IGEVFAH+P+EEVEGRLE+MKEENV+NLEKL+EEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELKKILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

A0A1S3C216 Prefoldin subunit 43.1e-5692.86Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD+D+IRF IGEVFAH+P+EEVEGRLE+MKEENV++L+KLEEEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELKKILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

A0A5D3D4H6 Prefoldin subunit 43.1e-5692.86Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD+D+IRF IGEVFAH+P+EEVEGRLE+MKEENV++L+KLEEEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELKKILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

A0A6J1G2Y9 Prefoldin subunit 42.7e-60100Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELKKILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

A0A6J1K9X7 Prefoldin subunit 41.7e-5998.41Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SIVAQMAELK+ILYGKFKDSINLEDD
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

SwissProt top hitse value%identityAlignment
Q2TBR6 Prefoldin subunit 41.0e-1641.54Show/hide
Query:  SNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLE
        + M++    +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA  +++L+D+D  MI + IG+VF    +EE +  LEE K+   + ++ LE
Subjt:  SNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLE

Query:  EEKDSIVAQMAELKKILYGKFKDSINLEDD
           +SI   +A+LK  LY KF  +INLE D
Subjt:  EEKDSIVAQMAELKKILYGKFKDSINLEDD

Q54TB7 Probable prefoldin subunit 41.2e-1237.82Show/hide
Query:  ESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED-MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQM
        E+EV   DQ+ IN F RLNNR HEL  E +  +E  +   D+ ++L ++D+D   ++ +GE F  V +E+ E  +E+   +  ++++K++ + + I  + 
Subjt:  ESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED-MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQM

Query:  AELKKILYGKFKDSINLED
         ELK ILY KFK+SINLE+
Subjt:  AELKKILYGKFKDSINLED

Q9M4B5 Probable prefoldin subunit 41.3e-4372.09Show/hide
Query:  MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEE
        MQQ G   GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+DE+M+RF IGEVFAHVPR++VE ++EEMKE   K+LEKLE+
Subjt:  MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEE

Query:  EKDSIVAQMAELKKILYGKFKDSINLEDD
        EK+SIV QMA LKK+LY KFKDSINLE+D
Subjt:  EKDSIVAQMAELKKILYGKFKDSINLEDD

Q9M4C4 Probable prefoldin subunit 45.0e-4876.19Show/hide
Query:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD
        MQQG G+E++VTWEDQQNIN+F RLNNRFHEL DEIR AKE N+NLEDA NELIL DED++RF IGEVFAH+P ++VE RLE+MKE+  K LE+LEEEK+
Subjt:  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKD

Query:  SIVAQMAELKKILYGKFKDSINLEDD
        SI+AQMAELKKILYGKFKD+INLE+D
Subjt:  SIVAQMAELKKILYGKFKDSINLEDD

Q9NQP4 Prefoldin subunit 47.8e-1741.54Show/hide
Query:  SNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLE
        + M++    +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA ++++L+D+D  MI + IG+VF    +EE +  LEE K+   + ++ LE
Subjt:  SNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED--MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLE

Query:  EEKDSIVAQMAELKKILYGKFKDSINLEDD
           +SI   +A+LK  LY KF  +INLE D
Subjt:  EEKDSIVAQMAELKKILYGKFKDSINLEDD

Arabidopsis top hitse value%identityAlignment
AT1G08780.1 ABI3-interacting protein 39.1e-4572.09Show/hide
Query:  MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEE
        MQQ G   GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+DE+M+RF IGEVFAHVPR++VE ++EEMKE   K+LEKLE+
Subjt:  MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEE

Query:  EKDSIVAQMAELKKILYGKFKDSINLEDD
        EK+SIV QMA LKK+LY KFKDSINLE+D
Subjt:  EKDSIVAQMAELKKILYGKFKDSINLEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAGAAAAGGGATTTTTGGGGAAATTCAGAGATGGGTTATGGTCCGAATGGGAAAAAATTACGTGGGGGCTCCAATTGGCTCGTTCCATTTCCGTCTAACCGGAG
CTTTCTTCCTCATTTTCACTGCGAGCGATTGACCGACTGTTCGAACATGCAGCAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAGCAGAATATTAACAAAT
TTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAA
GACATGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACT
CGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAGAAAAGGGATTTTTGGGGAAATTCAGAGATGGGTTATGGTCCGAATGGGAAAAAATTACGTGGGGGCTCCAATTGGCTCGTTCCATTTCCGTCTAACCGGAG
CTTTCTTCCTCATTTTCACTGCGAGCGATTGACCGACTGTTCGAACATGCAGCAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAGCAGAATATTAACAAAT
TTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAA
GACATGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACT
CGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAATACAGATAAGTTT
TCTGAAGCTGTTTTGATTCTATGTTTTTTGGATCTCGATGTCATATTCTCTCGTGTGGTCGTAGTCTTGGAATCCTCTGGAATTTGATTTGTTTTTTTTTTTTGTAGTTG
CATGCTTGTCTCTATAACAAACATGAATATCCTGTGTTCCTTGACTAGTTTACTAAATGGATGGATTCACTAACAAGTTGCTTAA
Protein sequenceShow/hide protein sequence
MREKRDFWGNSEMGYGPNGKKLRGGSNWLVPFPSNRSFLPHFHCERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDE
DMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD