; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23009 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23009
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCCHC-type domain-containing protein
Genome locationCarg_Chr05:11039778..11043108
RNA-Seq ExpressionCarg23009
SyntenyCarg23009
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0043111 - replication fork arrest (biological process)
GO:0048478 - replication fork protection (biological process)
GO:0031298 - replication fork protection complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR012923 - Chromosome segregation in meiosis protein 3
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040038 - TIPIN/Csm3/Swi3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599343.1 TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia]4.4e-149100Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

XP_022946681.1 TIMELESS-interacting protein [Cucurbita moschata]5.4e-14799.28Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSS PPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

XP_022999094.1 TIMELESS-interacting protein [Cucurbita maxima]3.0e-14598.19Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPN SRPPSSSAPAAP KVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEAS KNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGET+EGVVNQ EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

XP_023545691.1 TIMELESS-interacting protein [Cucurbita pepo subsp. pepo]7.3e-14497.84Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAP KVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVN-DADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEE
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVN D DDDINNENEAKDSEGLFDNQEEAS KNNGADDIEE
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVN-DADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEE

Query:  DMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        DMLQEVYEKATEEEPLMNLQSDSFTIGET+EGVVNQ EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  DMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

XP_038889611.1 TIMELESS-interacting protein [Benincasa hispida]1.7e-12482.43Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP---------------------NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYV
        M+KDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP                     NSSRPP SSAPAAPSKVAEKPKKAPR RPKLTPELLLSEDGLGYV
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP---------------------NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYV

Query:  LRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEG
        LRHFPR FKYRGRGHEISDL NLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+N  DDD+NNE EAKD EG
Subjt:  LRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEG

Query:  LFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPT
        +FDNQEEA  +NNGADDIEEDMLQEVYEKAT EEP  N+QSDSFTIGET+EGV NQEP  SNS+ET LTE+QR RMEANRLKALERAAAKARS PT
Subjt:  LFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPT

TrEMBL top hitse value%identityAlignment
A0A0A0LI96 CCHC-type domain-containing protein2.0e-12384.64Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDN AV APTGC+KCGKPGHWSRDCPSSAPNP    NSS P  SS PAAPSK  EKPKKAPR RPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD
        +DLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD + +FDNQEEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD

Query:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT
        IEEDMLQEVYEKAT EEPL N QSDS TIG TMEGV NQEP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS PT
Subjt:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT

A0A1S3C4P4 TIMELESS-interacting protein4.1e-12485.56Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNP    NSS+PP SSAPAAPSK  EKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD EG+FDN EEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD

Query:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPN----TSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT
        IEEDMLQEVYEKAT EEPL N QSDS T G TMEGV NQEPN    TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Subjt:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPN----TSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT

A0A5D3BGW4 TIMELESS-interacting protein4.1e-12485.56Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNP    NSS+PP SSAPAAPSK  EKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD EG+FDN EEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADD

Query:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPN----TSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT
        IEEDMLQEVYEKAT EEPL N QSDS T G TMEGV NQEPN    TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Subjt:  IEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQEPN----TSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT

A0A6J1G4B9 TIMELESS-interacting protein2.6e-14799.28Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSS PPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

A0A6J1KG39 TIMELESS-interacting protein1.4e-14598.19Show/hide
Query:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
        MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPN SRPPSSSAPAAP KVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE
Subjt:  MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLE

Query:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED
        NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEAS KNNGADDIEED
Subjt:  NLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEED

Query:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
        MLQEVYEKATEEEPLMNLQSDSFTIGET+EGVVNQ EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA
Subjt:  MLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQ-EPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA

SwissProt top hitse value%identityAlignment
Q3ZCC4 TIMELESS-interacting protein2.1e-0527.07Show/hide
Query:  SRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK
        + P   S   AP  V  K +   R  PKL  E L+SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+
Subjt:  SRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK

Query:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEG-----------LFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSF
         CL  +R             + PI++  +D ++N +E +++ G           L ++     F +  +  + E+  Q +   ++   E     L S+S 
Subjt:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEG-----------LFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSF

Query:  TIGETMEGVVNQEPNTSNSNETLLTEQQR
        ++G  +   VN  P+T  S      E+Q+
Subjt:  TIGETMEGVVNQEPNTSNSNETLLTEQQR

Q4QR88 TIMELESS-interacting protein5.1e-0725.85Show/hide
Query:  PGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPF
        PG   RD   + P+  S  P     P  P ++ +      R  PKL    L SE GL   LRH     K++G+GHE  DL+ LI     W   + P   F
Subjt:  PGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPF

Query:  EHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGL------FD-----NQEEASFKNNGADDIEEDMLQEVYEK
        E F+ +VE +   K V+ CL  +R             + PIV+  +D +NN +E +++  L      FD     + +   F +  + ++ E+  Q +  +
Subjt:  EHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGL------FD-----NQEEASFKNNGADDIEEDMLQEVYEK

Query:  ATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNE
          ++  L   Q+   +  +++E  V  E +++  N+
Subjt:  ATEEEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNE

Q5F416 TIMELESS-interacting protein6.3e-0526.8Show/hide
Query:  PGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPF
        PG    +   +  +P+ ++   +   ++ ++ A K     R  PKL    L+SE GL   LRH     K++G+GHE  DL+ L+     W   + P   F
Subjt:  PGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPF

Query:  EHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQ
        + F+ +VE +   K V+ CL  +R             + PI++  +D   NE    +S GL                          + ATEE     + 
Subjt:  EHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQ

Query:  SDSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAK
        S S  +GE     ++  P T+      LTE+Q+ R++ NR  ALER  AK
Subjt:  SDSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAK

Q91WA1 TIMELESS-interacting protein3.9e-0730.12Show/hide
Query:  PSSAPNPNSSRPPSSSAP--AAPSKVAEKPKK-APRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVH
        P   P  +  R P+ + P   + S V   PK+   R  PKL    L SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ 
Subjt:  PSSAPNPNSSRPPSSSAP--AAPSKVAEKPKK-APRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVH

Query:  KVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFT
        +VE +   K V+ CL  +R             + PIV+  +D +NN +E  ++              NG D             AT  +P +   SDS  
Subjt:  KVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFT

Query:  IGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSS
                   EP  S      LTE+Q+ R+E N+  ALER  AK  S+
Subjt:  IGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSS

Q9BVW5 TIMELESS-interacting protein1.5e-0629.29Show/hide
Query:  SRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK
        + P   S   AP +V  K +   R  PKL  + L+SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +VE + + K V+
Subjt:  SRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVK

Query:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSE---GLFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSFTIGETM
         CL  +R       D     E  + N+ +   NNE++   +E    L +  E   F +  +  + E+  Q +   ++   E     L S+S T+G  M
Subjt:  MCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSE---GLFDNQEEASFKNNGADDIEEDMLQEV--YEKATEEEPLMNLQSDSFTIGETM

Arabidopsis top hitse value%identityAlignment
AT3G02820.1 zinc knuckle (CCHC-type) family protein7.7e-5950.52Show/hide
Query:  AAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPA---------APSKVAEKPKKAPRV------RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRG
        +APTGC+KCG+PGHWSRDCPSSAP   ++   SSSAP+         + SK       AP+V      RPKLTPELLLSEDGLGYVLR+FP++FKYRGRG
Subjt:  AAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPA---------APSKVAEKPKKAPRV------RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRG

Query:  HEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDA-DDDINNENEAKDSEGLFDNQEEASFKNN
         E+SDL NLI LY EWH+H+LPYY F+HFVHKV+QVA+TKRVK C+ ELRE+VA G DP K  E    N    DD + +  + D E +     +A   + 
Subjt:  HEISDLENLIGLYREWHSHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDA-DDDINNENEAKDSEGLFDNQEEASFKNN

Query:  GADDIEEDMLQEVYEKATE---EEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETL--LTEQQRARMEANRLKALERAAAKARSSP
         AD  E+ ML E+++ A++   +E  M+  S+      T E     E N   + E    ++E+QR RMEANRLKALER  AKAR  P
Subjt:  GADDIEEDMLQEVYEKATE---EEPLMNLQSDSFTIGETMEGVVNQEPNTSNSNETL--LTEQQRARMEANRLKALERAAAKARSSP

AT3G42860.1 zinc knuckle (CCHC-type) family protein5.4e-0457.14Show/hide
Query:  AVAAPTGCYKCGKPGHWSRDCPSSAPNP
        + +A   C+KCGKPGHWSRDC + + NP
Subjt:  AVAAPTGCYKCGKPGHWSRDCPSSAPNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGATTGTCCGTCCTCTGCTCCAAATCCCAATTCTTC
GAGACCTCCTTCCTCTTCTGCTCCTGCTGCCCCTTCAAAAGTTGCAGAGAAGCCCAAAAAGGCTCCCAGAGTCAGGCCCAAGCTCACACCCGAGCTACTCCTTTCCGAGG
ATGGTCTAGGTTATGTCCTTCGCCATTTTCCTCGCGCTTTCAAGTATCGCGGCCGTGGACACGAGATCAGTGATTTGGAAAACTTGATTGGCTTATACAGGGAATGGCAT
TCTCATATACTCCCTTATTACCCTTTCGAGCATTTTGTACATAAGGTTGAACAAGTAGCTGCTACGAAACGGGTTAAGATGTGTCTTGGAGAACTAAGAGAGAAAGTTGC
CAGGGGAGGAGATCCTACAAAGTGGCGCGAATCACCCATTGTAAATGATGCTGATGATGATATCAATAATGAAAACGAAGCCAAAGACTCGGAGGGCTTATTCGATAATC
AGGAAGAGGCTTCTTTCAAGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGAGGAGCCATTGATGAATTTGCAAAGT
GATTCCTTCACCATTGGGGAAACTATGGAAGGTGTTGTCAACCAAGAACCAAACACTAGCAATTCAAATGAAACTCTGCTCACAGAACAACAGAGAGCTCGAATGGAAGC
AAACAGGTTGAAGGCATTAGAACGAGCTGCAGCCAAGGCCCGCTCATCGCCAACTGCCTGA
mRNA sequenceShow/hide mRNA sequence
AAACAATCTTTCCCCGCCGAGTGAAGTTTGCGAATAGCGAGAGGGATCGAACATGGATAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGC
CGGGCCACTGGTCTCGTGATTGTCCGTCCTCTGCTCCAAATCCCAATTCTTCGAGACCTCCTTCCTCTTCTGCTCCTGCTGCCCCTTCAAAAGTTGCAGAGAAGCCCAAA
AAGGCTCCCAGAGTCAGGCCCAAGCTCACACCCGAGCTACTCCTTTCCGAGGATGGTCTAGGTTATGTCCTTCGCCATTTTCCTCGCGCTTTCAAGTATCGCGGCCGTGG
ACACGAGATCAGTGATTTGGAAAACTTGATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTATTACCCTTTCGAGCATTTTGTACATAAGGTTGAACAAGTAG
CTGCTACGAAACGGGTTAAGATGTGTCTTGGAGAACTAAGAGAGAAAGTTGCCAGGGGAGGAGATCCTACAAAGTGGCGCGAATCACCCATTGTAAATGATGCTGATGAT
GATATCAATAATGAAAACGAAGCCAAAGACTCGGAGGGCTTATTCGATAATCAGGAAGAGGCTTCTTTCAAGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCA
GGAAGTTTATGAGAAAGCTACGGAAGAGGAGCCATTGATGAATTTGCAAAGTGATTCCTTCACCATTGGGGAAACTATGGAAGGTGTTGTCAACCAAGAACCAAACACTA
GCAATTCAAATGAAACTCTGCTCACAGAACAACAGAGAGCTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAACGAGCTGCAGCCAAGGCCCGCTCATCGCCAACTGCC
TGATTCATGTGCTTGCTTTGTGTAGATTAACTTTGATTGCAAAGCCAAATTACGATCAATGTGTGTGTCTTAGGAACCCGAGTTCAAGAAGGTTCAGAAGTTTACTGAGT
TTACACTTATCAAATCGGTTCCTATTTCAATTCGTGTGCTTGAAAATTCGACTTTATCGCACTCAATAACGGGAAACTCAAGAAAAATTATTAAACAACTGTTTTGAAGG
TAGAAACCGTAAGACGAACATGACTCTCCACAATGGTATAATATTGTCCTCTTTAAACA
Protein sequenceShow/hide protein sequence
MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNSSRPPSSSAPAAPSKVAEKPKKAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWH
SHILPYYPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKDSEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQS
DSFTIGETMEGVVNQEPNTSNSNETLLTEQQRARMEANRLKALERAAAKARSSPTA