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Carg23041 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23041
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationCarg_Chr11:9201585..9203779
RNA-Seq ExpressionCarg23041
SyntenyCarg23041
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148715.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]8.2e-3988.17Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPG+PP AGYPP GYP  GYPPPAYGPAYGQPPPQ QQQ+Q VGFLEGC+AALCCC +LDACF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

XP_022927665.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]6.9e-46100Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

XP_022952198.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]1.6e-3480.85Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPP+GY PKDAYPP G+PP  GYPPAGYP  GYPPPAYGPAYG P PQ+  Q++EVGF+EGC+AALCCCFVLD CF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

XP_023529875.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]2.0e-4598.92Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSY+NQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

XP_023553865.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]1.9e-3581.91Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPP+GY PKDAYPPPG+PP  GYPPAGYP  GYPPPAYGPAYG P PQ+  Q++EVGF+EGC+AALCCCFVLD CF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

TrEMBL top hitse value%identityAlignment
A0A6J1D3P4 cysteine-rich and transmembrane domain-containing protein WIH2-like3.9e-3988.17Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPG+PP AGYPP GYP  GYPPPAYGPAYGQPPPQ QQQ+Q VGFLEGC+AALCCC +LDACF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

A0A6J1EPM1 cysteine-rich and transmembrane domain-containing protein WIH2-like3.3e-46100Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

A0A6J1GJV9 cysteine-rich and transmembrane domain-containing protein WIH2-like7.7e-3580.85Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPP+GY PKDAYPP G+PP  GYPPAGYP  GYPPPAYGPAYG P PQ+  Q++EVGF+EGC+AALCCCFVLD CF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

A0A6J1I9Y5 cysteine-rich and transmembrane domain-containing protein WIH2-like3.6e-3278.72Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPP+GY PKDAYPPPG+PP  GYPPAGYP  GYPPPAYGP    P PQ+  Q++EVGF+EGC+AALCCCFVLD CF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGY-PKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

A0A6J1JP18 cysteine-rich and transmembrane domain-containing protein WIH2-like3.3e-46100Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

SwissProt top hitse value%identityAlignment
P24603 Rhodopsin6.5e-0764.71Show/hide
Query:  PPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQ
        PPQGYPP+GYP    PPP   PP GYPP GYP  GYPPP  GP    PPPQ
Subjt:  PPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQ

Q17094 Rhodopsin (Fragment)6.5e-0764.71Show/hide
Query:  PPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQ
        PPQGYPP+GYP    PPP   PP GYPP GYP  GYPPP  GP    PPPQ
Subjt:  PPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQ

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B1.2e-1959Show/hide
Query:  NQPPPPVGVPPPQGYPPEGYPKDAYPPP-------GHPPPAGYPPAGYPQAGYPPPAYG----PAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF
        +Q PP VGVPP   YP EG PKDAYPPP       G+PPP GYP  GYP  GYPP  Y     P  G PP Q QQQ+   G LEGC+AALCC  VLDACF
Subjt:  NQPPPPVGVPPPQGYPPEGYPKDAYPPP-------GHPPPAGYPPAGYPQAGYPPPAYG----PAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH21.8e-2870.3Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPA----GYPPAGYPQAGYP----PPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDAC
        MS YNQ  PPVGVPPPQGYPPEGYPKDAYPP G+PP      GYPP GYPQ GYP    PP Y P Y  PPPQ+QQQ+   GFLEGC+AALCCC +LDAC
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPA----GYPPAGYPQAGYP----PPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDAC

Query:  F
        F
Subjt:  F

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH13.7e-1862.37Show/hide
Query:  YNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQ---QQRQEVGFLEGCVAALCCCFVLDACF
        Y+Q   PVG PPPQGYP    PKD YPP G+ PPAGYPP GY Q GY      PA G PPPQY    QQ+Q  G LEGC+AALCCC +LDACF
Subjt:  YNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQ---QQRQEVGFLEGCVAALCCCFVLDACF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein1.3e-2970.3Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPA----GYPPAGYPQAGYP----PPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDAC
        MS YNQ  PPVGVPPPQGYPPEGYPKDAYPP G+PP      GYPP GYPQ GYP    PP Y P Y  PPPQ+QQQ+   GFLEGC+AALCCC +LDAC
Subjt:  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPA----GYPPAGYPQAGYP----PPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDAC

Query:  F
        F
Subjt:  F

AT3G49845.1 unknown protein2.9e-1847.54Show/hide
Query:  YNQPPPPVGVPPPQGYPP-EGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYG-----PAYGQPPPQYQQ--------------------------QRQ
        Y  P  PV  PPPQGYPP EGYP   YPPP   PP  YP AGYP AGYPPP  G     PA G PPPQY Q                          ++ 
Subjt:  YNQPPPPVGVPPPQGYPP-EGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYG-----PAYGQPPPQYQQ--------------------------QRQ

Query:  EVGFLEGCVAALCCCFVLDACF
          GF+EGC+A LCCC +L+ACF
Subjt:  EVGFLEGCVAALCCCFVLDACF

AT5G45350.1 proline-rich family protein4.7e-0860Show/hide
Query:  PPVGVPPPQGYPPEGYPKDAY-PPPGHPPPAGYPPAGYPQA--GYPP-PAYG-----PAYGQPPP
        PP G PPP  YPP GYP+  Y PPPG  PPAGYPP  YP A  GYPP P YG     P YG  PP
Subjt:  PPVGVPPPQGYPPEGYPKDAY-PPPGHPPPAGYPPAGYPQA--GYPP-PAYG-----PAYGQPPP

AT5G45350.2 proline-rich family protein4.7e-0860Show/hide
Query:  PPVGVPPPQGYPPEGYPKDAY-PPPGHPPPAGYPPAGYPQA--GYPP-PAYG-----PAYGQPPP
        PP G PPP  YPP GYP+  Y PPPG  PPAGYPP  YP A  GYPP P YG     P YG  PP
Subjt:  PPVGVPPPQGYPPEGYPKDAY-PPPGHPPPAGYPPAGYPQA--GYPP-PAYG-----PAYGQPPP

AT5G67600.1 unknown protein2.6e-1962.37Show/hide
Query:  YNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQ---QQRQEVGFLEGCVAALCCCFVLDACF
        Y+Q   PVG PPPQGYP    PKD YPP G+ PPAGYPP GY Q GY      PA G PPPQY    QQ+Q  G LEGC+AALCCC +LDACF
Subjt:  YNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQ---QQRQEVGFLEGCVAALCCCFVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTACAACCAGCCTCCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGAAGGTTATCCGAAGGACGCTTATCCGCCTCCAGGACATCCGCCGCC
GGCTGGTTATCCTCCTGCTGGTTATCCACAGGCAGGATATCCGCCTCCGGCTTATGGACCGGCGTACGGTCAACCTCCGCCTCAATATCAACAACAACGGCAAGAAGTTG
GATTCCTCGAAGGCTGTGTGGCTGCTCTTTGCTGTTGCTTCGTGTTGGATGCTTGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
AAGTTTGAAGGAGGGAATATGAAAAATTCAAACTCGAAAAGAAATAAAAAAGAAAATAAAATTCCGGACGCAAAGTAATTCTTTATTCAAATAGTTTTCATAGTTATAGC
TCTCTGGTTTCTCTGTTTGGCTACTAATAAAATCCATCCGATCGCGCAAGAAATCTCCGAGAGAAAGTAGTGGAAGAAAATGAGTTACTACAACCAGCCTCCGCCTCCCG
TCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGAAGGTTATCCGAAGGACGCTTATCCGCCTCCAGGACATCCGCCGCCGGCTGGTTATCCTCCTGCTGGTTATCCACAG
GCAGGATATCCGCCTCCGGCTTATGGACCGGCGTACGGTCAACCTCCGCCTCAATATCAACAACAACGGCAAGAAGTTGGATTCCTCGAAGGCTGTGTGGCTGCTCTTTG
CTGTTGCTTCGTGTTGGATGCTTGCTTTTAAGGACAGAAGCAGGAAGCTTTTTGTGAGTGAGTGAGTGATCATATGGTGTATGAAATTTTAATTTAATATCCAATGTTGC
AATGGCTTTATCTCCATCTTTATATTCTTATTTATGCCAACTCTATTTCTCTTCATATTTCTTGAACCTTGCTC
Protein sequenceShow/hide protein sequence
MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF