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Carg23055 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23055
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAC domain-containing protein
Genome locationCarg_Chr11:9327493..9328504
RNA-Seq ExpressionCarg23055
SyntenyCarg23055
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580573.1 NAC domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3953.12Show/hide
Query:  IEFKSLPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSV
        ++  + PFGY F P DEELL      +IVGD VPSI+L V D+Y+ EP++IWQ+CGG+++K+IYFFT L +   R + K G NG T SGE++G +VFSS 
Subjt:  IEFKSLPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSV

Query:  NNVLIGSIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK
        NN  IG+IKRFHY+T     +ND+DCSWI  EYT+DP  +   F +D YV+C+IR+R+LK
Subjt:  NNVLIGSIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK

KAG6588734.1 hypothetical protein SDJN03_17299, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4162.35Show/hide
Query:  KEIYFFTDLNRRN---LLKGGSNGVTRSGENRGQRVFSSVNNVLIGSIKRFHYKTLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKN
        KE YF T+ N+     + K  SNG T SG NRGQRVFSSVNNVLIGSIKRFHY+   DKANDNDCSWI  EYTIDP FI K     F ++C         
Subjt:  KEIYFFTDLNRRN---LLKGGSNGVTRSGENRGQRVFSSVNNVLIGSIKRFHYKTLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKN

Query:  GKKMQDNNTKIICLKSLLFGYVFAPTDEELLSYYLFHKIVGGTVPPTALTVINLYTQESSLI
                 KII  KS  FGYV APTDEELLSYYLFHKIVG TVPPT L+VI+LYTQE SLI
Subjt:  GKKMQDNNTKIICLKSLLFGYVFAPTDEELLSYYLFHKIVGGTVPPTALTVINLYTQESSLI

KAG7017325.1 NAC domain-containing protein 96, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-4053.75Show/hide
Query:  IEFKSLPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSV
        ++  + PFGY F P DEELL      +IVGD VPSI+L V D+Y+ EP++IWQ+CGG+++K+IYFFT L +   R + K G NG T SGE++G +VFSS 
Subjt:  IEFKSLPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSV

Query:  NNVLIGSIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK
        NN  IG+IKRFHY+T     AND+DCSWI  EYT+DP  +   F +D YV+C+IR+R+LK
Subjt:  NNVLIGSIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK

XP_022934631.1 NAC domain-containing protein 12-like [Cucurbita moschata]9.9e-4056.49Show/hide
Query:  PFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSVNNVLIG
        PFGY F P DEELL      +IVGD VPSI+L V D+Y+ EP++IWQQCGG+++K+IYFFT L +   R + K G NG T SGE++G +VFSS NN  IG
Subjt:  PFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSVNNVLIG

Query:  SIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK
        +IKRFHY+T     AND+DCSWI  EYT+DP  +   F +D YV+C+IR+R+LK
Subjt:  SIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK

XP_023528741.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]9.9e-4056.49Show/hide
Query:  PFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSVNNVLIG
        PFGY F P DEELL      +IVGD VPSI+L V D+Y+ EP++IWQQCGG+++K+IYFFT L +   R + K G NG T SGE++G +VFSS NN  IG
Subjt:  PFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSVNNVLIG

Query:  SIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK
        +IKRFHY+T     AND+DCSWI  EYT+DP  +   F +D YV+C+IR+R+LK
Subjt:  SIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK

TrEMBL top hitse value%identityAlignment
A0A1S3B8F1 NAC domain-containing protein 105-like2.5e-3348.12Show/hide
Query:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSS-VNNVL
        LP G+ F P DEELL      +++G+  P + L V DLY  EPS IWQ+CGG+D++++YFFT L +   R + K GSNG T S ENR ++VFSS ++++L
Subjt:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSS-VNNVL

Query:  IGSIKRFHYK--TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKNGK
        +GS+KRFHY+     D  + NDC+WI  EYT+DP  + K   +D YVLCMIR++++K+ K
Subjt:  IGSIKRFHYK--TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKNGK

A0A5A7TSB0 NAC domain-containing protein 105-like protein5.0e-2947.97Show/hide
Query:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSS-VNNVL
        LP G+ F P DEELL      +++G+  P + L V DLY  EPS IWQ+CGG+D++++YFFT L +   R + K GSNG T S ENR ++VFSS ++++L
Subjt:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSS-VNNVL

Query:  IGSIKRFHYK--TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVL
        +GS+KRFHY+     D  + NDC+WI  EYT+DP  + K   +D YVL
Subjt:  IGSIKRFHYK--TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVL

A0A5A7UPM7 NAC domain-containing protein 105-like protein1.5e-3046.3Show/hide
Query:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNRRN---LLKGGSNGVTRSGENRGQRVFSSVNNVLI
        LP GY F P DEELL      +I+GDF+P I L V D+YTQEP  IW+QCGG++ ++++FFT L +R    + K GSNG   SGE++  +VFS  +N L+
Subjt:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNRRN---LLKGGSNGVTRSGENRGQRVFSSVNNVLI

Query:  GSIKRFHYK----TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKNGKK
        G+ KRFHY+    T  D  N N  SWI  EYT+ P  + +   +D +VLCM+R+++LK  K+
Subjt:  GSIKRFHYK----TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKNGKK

A0A5D3BHG6 NAC domain-containing protein 105-like protein1.5e-3046.3Show/hide
Query:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNRRN---LLKGGSNGVTRSGENRGQRVFSSVNNVLI
        LP GY F P DEELL      +I+GDF+P I L V D+YTQEP  IW+QCGG++ ++++FFT L +R    + K GSNG   SGE++  +VFS  +N L+
Subjt:  LPFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNRRN---LLKGGSNGVTRSGENRGQRVFSSVNNVLI

Query:  GSIKRFHYK----TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKNGKK
        G+ KRFHY+    T  D  N N  SWI  EYT+ P  + +   +D +VLCM+R+++LK  K+
Subjt:  GSIKRFHYK----TLHDKANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKNGKK

A0A6J1F2C3 NAC domain-containing protein 12-like4.8e-4056.49Show/hide
Query:  PFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSVNNVLIG
        PFGY F P DEELL      +IVGD VPSI+L V D+Y+ EP++IWQQCGG+++K+IYFFT L +   R + K G NG T SGE++G +VFSS NN  IG
Subjt:  PFGYVFVPIDEELL------RIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNR---RNLLKGGSNGVTRSGENRGQRVFSSVNNVLIG

Query:  SIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK
        +IKRFHY+T     AND+DCSWI  EYT+DP  +   F +D YV+C+IR+R+LK
Subjt:  SIKRFHYKTLHD-KANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAATTCAAGTCACTCCCGTTCGGCTACGTCTTCGTTCCTATCGACGAAGAATTATTGAGGATTGTTGGAGACTTTGTTCCATCAATTGCGCTTCATGTGTTCGATCT
TTACACCCAAGAGCCTTCTCTAATATGGCAACAATGTGGAGGGATTGATGAGAAAGAAATCTACTTCTTCACCGACCTTAATAGGAGAAATCTCCTAAAAGGCGGCTCTA
ATGGTGTCACTCGGAGTGGTGAAAACAGAGGTCAACGAGTATTTTCTTCCGTTAATAATGTCCTAATTGGTAGTATCAAACGGTTTCATTACAAGACTCTTCATGACAAA
GCTAATGACAATGATTGTTCTTGGATCAAGCTCGAGTACACAATTGATCCTATTTTCATACAAAAAGTGTTCGGGTATGATTTCTACGTACTCTGCATGATTCGAAGAAG
GATGTTAAAAAACGGAAAAAAAATGCAGGACAATAATACAAAAATCATTTGTCTCAAGTCACTCCTATTCGGCTACGTCTTCGCTCCTACCGATGAAGAATTATTGAGCT
ATTATCTTTTCCACAAGATTGTTGGAGGAACTGTTCCACCAACTGCTCTTACTGTGATCAATCTTTACACACAAGAGTCTTCTCTAATA
mRNA sequenceShow/hide mRNA sequence
ATTGAATTCAAGTCACTCCCGTTCGGCTACGTCTTCGTTCCTATCGACGAAGAATTATTGAGGATTGTTGGAGACTTTGTTCCATCAATTGCGCTTCATGTGTTCGATCT
TTACACCCAAGAGCCTTCTCTAATATGGCAACAATGTGGAGGGATTGATGAGAAAGAAATCTACTTCTTCACCGACCTTAATAGGAGAAATCTCCTAAAAGGCGGCTCTA
ATGGTGTCACTCGGAGTGGTGAAAACAGAGGTCAACGAGTATTTTCTTCCGTTAATAATGTCCTAATTGGTAGTATCAAACGGTTTCATTACAAGACTCTTCATGACAAA
GCTAATGACAATGATTGTTCTTGGATCAAGCTCGAGTACACAATTGATCCTATTTTCATACAAAAAGTGTTCGGGTATGATTTCTACGTACTCTGCATGATTCGAAGAAG
GATGTTAAAAAACGGAAAAAAAATGCAGGACAATAATACAAAAATCATTTGTCTCAAGTCACTCCTATTCGGCTACGTCTTCGCTCCTACCGATGAAGAATTATTGAGCT
ATTATCTTTTCCACAAGATTGTTGGAGGAACTGTTCCACCAACTGCTCTTACTGTGATCAATCTTTACACACAAGAGTCTTCTCTAATA
Protein sequenceShow/hide protein sequence
IEFKSLPFGYVFVPIDEELLRIVGDFVPSIALHVFDLYTQEPSLIWQQCGGIDEKEIYFFTDLNRRNLLKGGSNGVTRSGENRGQRVFSSVNNVLIGSIKRFHYKTLHDK
ANDNDCSWIKLEYTIDPIFIQKVFGYDFYVLCMIRRRMLKNGKKMQDNNTKIICLKSLLFGYVFAPTDEELLSYYLFHKIVGGTVPPTALTVINLYTQESSLI