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Carg23081 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23081
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCoatomer subunit zeta
Genome locationCarg_Chr07:725530..728387
RNA-Seq ExpressionCarg23081
SyntenyCarg23081
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR011012 - Longin-like domain superfamily
IPR022775 - AP complex, mu/sigma subunit
IPR039652 - Coatomer subunit zeta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026485.1 Coatomer subunit zeta-2 [Cucurbita argyrosperma subsp. argyrosperma]7.2e-56100Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLTKSLLT
Subjt:  TISQALATAREHLTKSLLT

XP_004134635.1 coatomer subunit zeta-2 [Cucumis sativus]3.3e-5394.96Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFE+N V+YKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLT+SLLT
Subjt:  TISQALATAREHLTKSLLT

XP_022926445.1 coatomer subunit zeta-2-like [Cucurbita moschata]7.2e-56100Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLTKSLLT
Subjt:  TISQALATAREHLTKSLLT

XP_023003681.1 coatomer subunit zeta-2-like [Cucurbita maxima]7.2e-56100Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLTKSLLT
Subjt:  TISQALATAREHLTKSLLT

XP_038883879.1 coatomer subunit zeta-2-like [Benincasa hispida]2.6e-5395.8Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFE+N VVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLT+SLLT
Subjt:  TISQALATAREHLTKSLLT

TrEMBL top hitse value%identityAlignment
A0A0A0KLW2 Coatomer subunit zeta1.6e-5394.96Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFE+N V+YKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLT+SLLT
Subjt:  TISQALATAREHLTKSLLT

A0A1S3B001 Coatomer subunit zeta1.6e-5394.96Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFE+N V+YKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLT+SLLT
Subjt:  TISQALATAREHLTKSLLT

A0A6J1CMD1 Coatomer subunit zeta2.8e-5394.96Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFE+N VVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEA ENL+LILLCLDEIVDGGIVLETDGNVIAGKVATQSIDS+APLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLT+SLLT
Subjt:  TISQALATAREHLTKSLLT

A0A6J1EL47 Coatomer subunit zeta3.5e-56100Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLTKSLLT
Subjt:  TISQALATAREHLTKSLLT

A0A6J1KPX3 Coatomer subunit zeta3.5e-56100Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        TISQALATAREHLTKSLLT
Subjt:  TISQALATAREHLTKSLLT

SwissProt top hitse value%identityAlignment
Q6Z844 Coatomer subunit zeta-21.9e-4376.27Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        +F+   VVYKFVQDLHFFVT G+ ENELI+A VLQGF D+VGLLLRG VEK+ A ENL+LILLC+DEIVDGGI+LETD N IAGKVAT ++D SAP SEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLL
        TISQALATAREHL +SLL
Subjt:  TISQALATAREHLTKSLL

Q84LG4 Coatomer subunit zeta-29.5e-4375.63Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        + +SN +VYKF QDLHFFVTGGE ENELILA+VLQGFFDAV LLLR +VEK EA ENL+LI LCLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        T++QALATAREHL +SLLT
Subjt:  TISQALATAREHLTKSLLT

Q8H1F4 Coatomer subunit zeta-39.5e-4375.63Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        + ESN VVYKF QDLHFFVTGGE ENEL+L++VLQGFFDAV LLLR +VEK EA ENL+LI LCLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        T++QALATAREHL +SLLT
Subjt:  TISQALATAREHLTKSLLT

Q940S5 Coatomer subunit zeta-11.4e-4175.86Show/hide
Query:  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTI
        E+N VVYKFVQDLHFFVTGGE ENELILA+VL+G FDAV LLLR +V+K+EA +NL+LI L  DEI+DGGIVLETD NVIAGK    S D +APLSEQTI
Subjt:  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTI

Query:  SQALATAREHLTKSLL
        SQALATAREHLT+SL+
Subjt:  SQALATAREHLTKSLL

Q9MAX5 Coatomer subunit zeta-14.4e-4072.03Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        MF+ + VVYKF+QDLHFFVTGGE ENELILA+VLQGF DAV ++LR +V+K+ A ENL+LILLCLDEIVDGGIVLET+G+VIA KV+   I+ +  L+EQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLL
        TI QAL TAREHLTKSLL
Subjt:  TISQALATAREHLTKSLL

Arabidopsis top hitse value%identityAlignment
AT1G60970.1 SNARE-like superfamily protein9.7e-4375.86Show/hide
Query:  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTI
        E+N VVYKFVQDLHFFVTGGE ENELILA+VL+G FDAV LLLR +V+K+EA +NL+LI L  DEI+DGGIVLETD NVIAGK    S D +APLSEQTI
Subjt:  ESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTI

Query:  SQALATAREHLTKSLL
        SQALATAREHLT+SL+
Subjt:  SQALATAREHLTKSLL

AT3G09800.1 SNARE-like superfamily protein6.7e-4475.63Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        + +SN +VYKF QDLHFFVTGGE ENELILA+VLQGFFDAV LLLR +VEK EA ENL+LI LCLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        T++QALATAREHL +SLLT
Subjt:  TISQALATAREHLTKSLLT

AT4G08520.1 SNARE-like superfamily protein6.7e-4475.63Show/hide
Query:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ
        + ESN VVYKF QDLHFFVTGGE ENEL+L++VLQGFFDAV LLLR +VEK EA ENL+LI LCLDE+VD G+VLETD NVIAGKVA QS ++S  LSEQ
Subjt:  MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQ

Query:  TISQALATAREHLTKSLLT
        T++QALATAREHL +SLLT
Subjt:  TISQALATAREHLTKSLLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAAGCAATACTGTTGTTTACAAGTTTGTGCAAGACCTACATTTTTTTGTCACTGGTGGAGAATATGAGAATGAGCTCATTTTGGCGACTGTTCTTCAGGGATT
CTTCGATGCTGTTGGCCTTCTCCTGAGGGGTCATGTGGAAAAGAAGGAAGCACGTGAAAACTTGGAACTTATTTTGTTGTGCCTTGATGAAATTGTTGATGGAGGTATTG
TTCTTGAGACCGATGGAAATGTCATTGCTGGGAAAGTTGCAACTCAAAGTATAGATTCTTCAGCTCCTTTGTCTGAGCAGACAATTAGCCAAGCACTGGCAACTGCACGT
GAACATCTCACGAAATCTCTTCTTACATGA
mRNA sequenceShow/hide mRNA sequence
CACAACTGTAAACAATGGTAAATTCTACCCTTCACTTTTTCCGTATTTGATTTCCCCTCTGTGATTGATAATCTTGCACTTGAGCTCGTTATAGGCGTTGATTTAATTTG
ACACTACGATCTTCACGTGTGTTTGTCACCGATTTGAACCCATTTCTTCCAATGCTGTTCTCTTTATCTCTCATAATGCTTGATTCGATAGTATATACTTTTGAGATTGT
GATTATAATTGAATCGCTTAGAATCTCTGATCGGATCAAACTAATTCATGCACACACATTCATCTGGGCGCTAATATTTGGTTTTGGAGGTAGAATGATCCGATGTTCAG
GATGTTATTAGCAGGAAGATCGCCAATTTTTTTCTCTCCCTCAAATGAACACTGTTATGTTTCTTCCTATCGTGGTTTGCCAGGGTAAACTTTTGAATTCCATATGAGAA
GATGAATGAAATTAGATATAAGCTTGCAAAAGTTATTCTGTCGGCTTGGGTTTTGAATCACGATGAACGATTAGAATTTTCTTATGTTAGAGCGGTACCTATCTGTTGCT
GGGGCAGCCTGAACAAATCCATAATTCTTGCTTGTTTCTTCGTCAAGATCATCCATCGGACGTCTAGGCCACTGCTATAAAACCACTATGATGCTGAATCGCTGATATGC
ATACCTGTAGTATTACTACAAATACTACGGATTTTCATGTGATGATTCTTTGCTCTGTACGTGGATTTGATGTAGGATTCCTGTCCTTCAATAAAAAATATTCTCCTGTT
GGATTCTGACGGGAAACGTGTGGCCGTCAAGTATTACTCAGATGAGTGGCCAACAAATAATGCAAGGGAATCTTTTGAGAAATCTTTATTTAGCAAAACTCAAAAGAGCA
ATGCTCGAAATGAAGCGGAGATAACGATGTTTGAAAGCAATACTGTTGTTTACAAGTTTGTGCAAGACCTACATTTTTTTGTCACTGGTGGAGAATATGAGAATGAGCTC
ATTTTGGCGACTGTTCTTCAGGGATTCTTCGATGCTGTTGGCCTTCTCCTGAGGGGTCATGTGGAAAAGAAGGAAGCACGTGAAAACTTGGAACTTATTTTGTTGTGCCT
TGATGAAATTGTTGATGGAGGTATTGTTCTTGAGACCGATGGAAATGTCATTGCTGGGAAAGTTGCAACTCAAAGTATAGATTCTTCAGCTCCTTTGTCTGAGCAGACAA
TTAGCCAAGCACTGGCAACTGCACGTGAACATCTCACGAAATCTCTTCTTACATGACGTATACGCTTGCTCATGGGGGGAGGAGCATGGAGAAAATACCCTTTTATCCGA
CTAGTGGTTTAAAACGACACAAAGAGTGGTTCGTTCCCATCACCTTGGA
Protein sequenceShow/hide protein sequence
MFESNTVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEARENLELILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAR
EHLTKSLLT