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Carg23110 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23110
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprecursor of CEP14
Genome locationCarg_Chr07:869557..869811
RNA-Seq ExpressionCarg23110
SyntenyCarg23110
Gene Ontology termsGO:0006970 - response to osmotic stress (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
InterPro domainsIPR038930 - Precursor of CEP13/CEP14


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026512.1 Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-35100Show/hide
Query:  MAARFTLITCPLLLLLLFASSALTSHAARLLPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH
        MAARFTLITCPLLLLLLFASSALTSHAARLLPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH
Subjt:  MAARFTLITCPLLLLLLFASSALTSHAARLLPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH

KAG7034658.1 Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2179.27Show/hide
Query:  ARFTLITCPLLLLLLFASSALTSHAARLLPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH
        A F LIT PL+L LLFASSA TSHAARLL T     SLFLAALPKGTVPSS PSKK HA++LDQKLTARHLV+SVPSPGIGH
Subjt:  ARFTLITCPLLLLLLFASSALTSHAARLLPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH

KZN04308.1 hypothetical protein DCAR_005145 [Daucus carota subsp. sativus]1.0e-0849.45Show/hide
Query:  LLLLLLFASSALTSHAARL-----------LPTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH
        LL LL  AS   T HA +L            P  PS P SL+L++LPKGTVP+SAP+KK H+L++D+KL ARHL      + SVPSPG+G+
Subjt:  LLLLLLFASSALTSHAARL-----------LPTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH

XP_015875435.1 precursor of CEP14 [Ziziphus jujuba]7.9e-0951.16Show/hide
Query:  LLLLLLFASSALTSHAARLL------PTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV------ESVPSPGIGH
        +L +++FASSA +S A +LL         PS   SLFL+ALPKG VPSS+PS K HA+++++KL ARHL+      +SVPSPG+GH
Subjt:  LLLLLLFASSALTSHAARLL------PTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV------ESVPSPGIGH

XP_028764797.1 precursor of CEP14 [Prosopis alba]1.0e-0849.49Show/hide
Query:  MAARFTLITCPLLLLLLFASSALTSHAARL---------LPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV------ESVPSPGIGH
        MA  FT +   L+  +L AS    S A +L         + T PS  SLFL+ALPKGTVPSS PSKK HA ++D+KL ARHL+       SVPSPG GH
Subjt:  MAARFTLITCPLLLLLLFASSALTSHAARL---------LPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV------ESVPSPGIGH

TrEMBL top hitse value%identityAlignment
A0A0A0KKF2 Uncharacterized protein6.3e-2069.88Show/hide
Query:  RFTLITCPLLLLLLFASSALTSHAARLLPTT--PSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH
        RFT IT  L+L LLFA SA TS AARLLPT   PSP++LFL ALPKGT+P+S+PSKK H++LL   LTARHLV+SVPSPG+GH
Subjt:  RFTLITCPLLLLLLFASSALTSHAARLLPTT--PSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH

A0A166CTC8 Uncharacterized protein5.0e-0949.45Show/hide
Query:  LLLLLLFASSALTSHAARL-----------LPTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH
        LL LL  AS   T HA +L            P  PS P SL+L++LPKGTVP+SAP+KK H+L++D+KL ARHL      + SVPSPG+G+
Subjt:  LLLLLLFASSALTSHAARL-----------LPTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH

A0A175YNB1 Uncharacterized protein8.6e-0947.83Show/hide
Query:  LLLLLLFASSALTSHAARLL-------------PTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH
        LL LL  AS A T H  +L              P  PS  SL+LA+LPKGTVP+S PSK+ H+ ++D+KL ARHL      + SVPSPG+GH
Subjt:  LLLLLLFASSALTSHAARLL-------------PTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH

A0A6P3ZC36 precursor of CEP143.8e-0951.16Show/hide
Query:  LLLLLLFASSALTSHAARLL------PTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV------ESVPSPGIGH
        +L +++FASSA +S A +LL         PS   SLFL+ALPKG VPSS+PS K HA+++++KL ARHL+      +SVPSPG+GH
Subjt:  LLLLLLFASSALTSHAARLL------PTTPS-PHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV------ESVPSPGIGH

K7L653 Uncharacterized protein1.5e-0851.14Show/hide
Query:  TCPLLLLLLFASSALTSHAARLL---PTTPSPH--SLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV-------ESVPSPGIGH
        T  LL +LLFAS      A +L+      PS    SLFL+ALPKGTVP S+PSKK H++ +D+KL ARHL+        SVPSPG+GH
Subjt:  TCPLLLLLLFASSALTSHAARLL---PTTPSPH--SLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLV-------ESVPSPGIGH

SwissProt top hitse value%identityAlignment
Q52K95 Precursor of CEP144.5e-0755.1Show/hide
Query:  LAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH
        L+ALPKG +P+S PSKK HA +   KL +RHL      + SVPSPG+GH
Subjt:  LAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH

Arabidopsis top hitse value%identityAlignment
AT1G29290.1 unknown protein3.2e-0855.1Show/hide
Query:  LAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH
        L+ALPKG +P+S PSKK HA +   KL +RHL      + SVPSPG+GH
Subjt:  LAALPKGTVPSSAPSKKAHALLLDQKLTARHL------VESVPSPGIGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCCGCTTCACACTCATCACTTGCCCTCTCCTTTTGCTCCTTCTATTCGCATCCTCTGCCCTCACATCACACGCCGCCAGACTCCTCCCTACAACGCCGTCTCC
ACACAGCCTCTTTCTCGCCGCCCTTCCCAAGGGCACCGTCCCCTCTTCCGCTCCCAGCAAAAAAGCCCATGCCCTGCTCCTCGACCAGAAGCTCACTGCTCGACACCTCG
TAGAGTCCGTTCCAAGCCCCGGCATCGGCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCCGCTTCACACTCATCACTTGCCCTCTCCTTTTGCTCCTTCTATTCGCATCCTCTGCCCTCACATCACACGCCGCCAGACTCCTCCCTACAACGCCGTCTCC
ACACAGCCTCTTTCTCGCCGCCCTTCCCAAGGGCACCGTCCCCTCTTCCGCTCCCAGCAAAAAAGCCCATGCCCTGCTCCTCGACCAGAAGCTCACTGCTCGACACCTCG
TAGAGTCCGTTCCAAGCCCCGGCATCGGCCATTAG
Protein sequenceShow/hide protein sequence
MAARFTLITCPLLLLLLFASSALTSHAARLLPTTPSPHSLFLAALPKGTVPSSAPSKKAHALLLDQKLTARHLVESVPSPGIGH